Oncorhynchus keta (chum salmon): 118365361
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Entry
118365361 CDS
T09424
Name
(RefSeq) probable E3 ubiquitin-protein ligase MGRN1 isoform X1
KO
K10604
E3 ubiquitin-protein ligase MGRN1 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
oke04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118365361
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
118365361
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118365361
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118365361
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
118365361
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C3HC4_3
zf-RING_2
Prok-RING_4
zf-C3HC4
zf-RING_5
zf-C3HC4_2
zf-RING_11
Motif
Other DBs
NCBI-GeneID:
118365361
NCBI-ProteinID:
XP_035603412
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All DBs
Position
32:24437205..24447017
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AA seq
548 aa
AA seq
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MGSILSRRIAGVEDIDIQANSAYRFPPKSGNYFASHFFMGGEKFDTPHPEGYLFGENMDL
NFLGNRPVQFPYVTPAPHEPVKTLRSLVNIRKDSLRLVRYKDDTDAPVEEGGKPKVLYGV
EFTFDADARVAITLYCQAFEEFTNGMAMYNPKGPALVSETVHYKRGVSQHFSLPSFKIDF
TDWKEEDLNFDLDRGVFPMVIQAVVDEGDDCLGHAHVLLAAFERHVDGSFSVKPLKQKQI
VDRVSYLLQEIYGIENKNNQETKPSEDENSDNSNECVVCLSDLRDTIILPCRHLCLCNSC
ADTLRYQANNCPICRLPFRALLQIRAVRKKPGPLSPVSFSPVLAQTMDHDEHSSSDSVPP
GFEPISLLEALNGLHSVSPSIPPAPLYDDINFSGSLVGEGRPLGSPEHSGDGGLQKGKVS
KSPDSTLRSPSSPIQEEDEEKLSEMSDAQPHTLLSSSPAPTEATAAEDVPESISPDDEDR
LHSGGEREILHDYSSEHSSLTKTESDPPGDLSLPGSSESLKSQSTNCSSQPLLCPPSSLH
MEDEQFDP
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggggtcgattcttagccggagaatcgctggcgttgaggatattgatatccaggcgaat
tctgcgtacagatttccaccgaaatcggggaattactttgccagccattttttcatggga
ggggagaaatttgacacgccacatccagagggttacctatttggagagaacatggatctg
aacttccttggaaataggcctgtacaatttccgtacgtgaccccggcaccccatgagcct
gtgaagaccctgaggagtctggtcaatatcagaaaggactccctgcgcttggtcaggtac
aaagatgacactgatgctccagtagaggaaggagggaagccaaaggttctgtatggtgtg
gagttcacatttgacgctgatgctcgtgtggctatcaccctgtattgccaagcttttgag
gaattcaccaatgggatggcaatgtacaacccaaagggcccagccctggtttctgagact
gtacactataagaggggtgtgagccaacatttctccctaccttctttcaaaatcgatttc
accgactggaaggaggaggatctgaactttgacctggaccggggtgttttccccatggtg
atccaagctgtggtggatgaaggggatgattgcttgggacatgcacatgtgctgctggca
gcttttgagagacatgtggatggcagtttctccgtcaagcctctgaagcagaagcaaatt
gtggatcgtgtgagctacctgctgcaggagatctatggaattgaaaacaaaaacaaccaa
gagaccaagccatcggaggatgagaacagtgacaacagcaatgagtgtgttgtttgtctg
tcagacctccgagacaccatcattctgccctgcagacacctgtgtctctgcaactcctgt
gctgacaccctgcgttaccaggccaacaactgtcctatctgcagactgcccttccgagcc
ttgctgcagatcagagctgtgaggaagaagcctgggccactgtcacctgtgtctttcagc
cctgtactggctcagaccatggaccatgatgagcactcgagctcagactcggttccccca
ggctttgagcccatctctctgctggaggccctgaatggcctgcactctgtgtccccctcc
atcccccccgcccccctctacgatgatattaacttctctgggagcctggtaggggagggc
cggccgctgggctccccagaacactccggggacgggggcctgcagaagggcaaggtcagc
aagtcacctgacagcaccctgaggtcgccctcatcacccatccaggaggaggatgaggag
aagctgtctgagatgtcggacgcccagcctcacacactgctctccagcagccctgctccc
accgaggccactgcagccgaggatgtaccggagtccatctccccagatgatgaggacagg
ctgcactctggaggagagcgagagatccttcacgactacagcagtgaacacagcagcctg
accaaaacagagagtgacccgccaggggacctgtctctgccagggtcatcagagagcctg
aagagtcagagtaccaactgctctagccaacccctcctgtgtccccccagcagccttcac
atggaggatgagcaatttgacccctaa
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