Oncorhynchus keta (chum salmon): 118365449
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Entry
118365449 CDS
T09424
Name
(RefSeq) ran GTPase-activating protein 1-like isoform X1
KO
K14319
Ran GTPase-activating protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
118365449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118365449
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
118365449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RanGAP1_C
LRR_6
Nop14
BUD22
CobT
Motif
Other DBs
NCBI-GeneID:
118365449
NCBI-ProteinID:
XP_035603567
LinkDB
All DBs
Position
32:complement(26549964..26555341)
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AA seq
567 aa
AA seq
DB search
MATDAVAQLADSLAKTQVTEGELSYKGQGRKFDNAQSVEEMVKEIQEFKGLQALRLEGNT
YGVEAAQAIAKALETKSEFKYCYWSDMFTGRLRSEIPPALNSLGAALMTAGARLTVLDLS
DNAFGPDGVKGIEKLLKSTACHTLQELRLNNCGMGIGGGKILAAALTECYKQSSAQGTPL
GLKVFIAGRNRLENDGATALAQAFQLMGSLEEVHVPQNGINHPGVTALATAMQHNPQLRV
LNLNDNTFTKKGAIAMAQALKHLRSVQVINFGDCLVRSEGAIAIAEAITEGLPILKELNL
SFGEITGEAALLVAQSVEGKATLEKLDLNGNCLGEEGCDALREVMDGLNMGDLLGSLSDD
EGEPEEDDEDDEDEEEDDYEEEEDDDVEEEDSSVNEVSSPLSVPRPPDASSFLCFPSPDK
LLKLGTKRALLFEQQVDVADAGKTAEAFLKISSVYNEEDKDVKSAVLDSIDAILRKAFAS
PSFQGYNFISSLLVMLGLLKSEDKVKPVRVVPGHLQALEYVVRQDYFPQDHIAVLEAFMS
RHVQALESCSSARNILKSTLEQVRPEN
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagatgctgttgcacagttggccgactctctggccaaaactcaggtgactgag
ggagagttgagttataaaggccaaggacgcaaattcgacaatgcacaatctgtggaagag
atggtgaaagagatccaggagttcaaggggttgcaagcgctcaggctggaggggaacact
tatggggtggaggcagcacaggccatcgctaaagccctggagacaaagagtgaatttaag
tactgttactggagtgacatgtttactgggcgactgcgttctgagatacctccagccctg
aactctctgggtgcggccctgatgacagcaggcgccagactgaccgtgctggaccttagt
gacaatgcctttggaccagacggggtgaagggcatcgagaagttgctcaagagcactgcc
tgtcacacactgcaggaactgaggctcaacaactgcggcatgggcattggtggaggcaag
atcttagctgcagcgttgacggagtgctataagcagtccagtgcacagggcacccccctc
gggctgaaggtgttcatcgcaggcagaaaccgtctggagaacgatggggccactgccctc
gcccaggccttccagctgatgggtagtctggaggaggtgcacgtgccccagaatgggatc
aaccaccctggagtgactgctctggccactgccatgcaacacaacccccagctccgggtc
ctcaacctcaatgacaacaccttcaccaagaaaggagctatcgccatggcacaggctctg
aaacatttgcgtagtgtccaggtgataaactttggagactgtctggtgcgttccgagggg
gctatagccatcgcagaggcaatcactgaggggcttcccatcctcaaggagctgaatctg
tcattcggggagatcacaggagaagctgcactgttggtggcacaatcagtcgagggcaaa
gccacactggagaaactggacctaaatggtaactgcctgggggaggagggctgtgatgct
ctcagagaggtaatggatggcctgaacatgggagacctgctgggatcactcagcgacgat
gaaggggagccggaggaggatgatgaggatgatgaagatgaggaggaggatgactatgag
gaggaggaggatgatgatgtggaggaagaagacagcagtgtgaatgaggtttcctcgcct
ctgtcagtgccccgacccccagatgcctcctccttcctctgcttcccatcccccgacaag
ctacttaaactgggcaccaagagggccctgctctttgaacagcaggtagatgtggctgat
gctggtaagacagcggaggcattcttgaaaatctcctctgtgtacaatgaggaagataaa
gatgttaaaagtgctgtactagacagtattgatgcaattcttaggaaagccttcgcaagc
ccctccttccaaggttacaactttatatcatcactgttagtaatgctgggactcctcaag
agtgaggacaaggtgaagccggtgcgtgtggtacctgggcatttgcaggccctggagtat
gttgtgcgtcaggactacttcccccaggaccacattgccgtgctggaggccttcatgtcc
cgacacgtccaggccctggagtcgtgcagtagcgccaggaacatcctcaagtccacgctg
gagcaggtcaggcctgaaaactga
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