Oncorhynchus keta (chum salmon): 118365471
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Entry
118365471 CDS
T09424
Name
(RefSeq) ADP-ribosylation factor-binding protein GGA1-like isoform X1
KO
K12404
ADP-ribosylation factor-binding protein GGA
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118365471
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118365471
Membrane trafficking [BR:
oke04131
]
Endosome - Golgi transport
Others
GGA
118365471
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VHS
GAT
Alpha_adaptinC2
GGA_N-GAT
ImmE5
Hrs_helical
PCRF
Elf4
Motif
Other DBs
NCBI-GeneID:
118365471
NCBI-ProteinID:
XP_035603616
LinkDB
All DBs
Position
32:complement(26845742..26851991)
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AA seq
690 aa
AA seq
DB search
MRQCQLPSCPSSTHHCRGGEKGSSQSCPSRDTFMVKRIPVVMAASPDTDSLEARINKATN
PLNRDTDWDSIQAFCDQLNNDLEGPQLATRLLAHKIQSPQEWEAMQTLVVLETCMKSCGE
RFHSEVGKFRFLNELIKVVSPKYLGTRAPEPVKKKVLELIYSWTLGLPDEAKIADAYQML
KKQGIVKQDPVLPADKLLLLPPPRPKNAIFEDEEKSKTLTRLLNSTHPEDLKAANKLIQE
MVQEDQKRAEKLSKRVNAIQDVNESVSLLTQLLEDYDRTTNPQSNAELIQDLYQRCEKMR
PTLFRLASDTEDNDEALAEILQANDSLTQVINLYRQQVKGEVVNGNNSANTRRLTGSSVA
LLDLSGLDTSPPSYPEFPTPTDSLSAPSQEMGISLLDDELMSLGLSEGTHTSNPASQPED
STAWDSFQSSDSVDITDIPAAPSVLLSPDRLPYTQPLSTGATSGSSALDELDLLGKKLLQ
QSLPPEGLQVKWDKPPFKPTLRDLQNKSGSNPSPIPAFSPEHPVAPLGDRLLDTSPVHTV
IPPIEMTLTDVFVPLESIKPSSLLPVTVFDSHSLRVLFHFARDTPSSLADVLVVIISMLS
SAPVPVSNILFQPSVPDTMRVKLQPPSGTELPAFNPILPPAAITQVLLLANPHKEKVQLQ
YKLTFMLGEEDHDERGVVVQFPPSDTWGNL
NT seq
2073 nt
NT seq
+upstream
nt +downstream
nt
atgcgacagtgccagctgccatcgtgtccatcatccacccatcactgtcggggaggtgag
aaggggagctctcaaagttgtccatcgcgagacacgttcatggtaaagagaattccggta
gtgatggcggcgtcgcctgacacggacagtttggaggcacgtatcaacaaggccacaaac
ccactgaacagagacacagattgggacagcatccaggccttctgtgaccagctcaacaat
gatttggagggaccccagctggccaccaggctactggctcacaagatccaatcacctcag
gagtgggaggccatgcagacactcgtggtgctggagacgtgcatgaagagctgtggggaa
aggttccacagtgaggtgggcaagtttcgcttcctcaatgagctcatcaaagtggtctct
ccaaagtacctcggcacccgggctccagagccagtgaagaagaaggtgttggagctcatc
tatagttggacactggggctgcctgacgaggcaaagatcgctgatgcctaccagatgctt
aaaaaacagggcattgtcaaacaggacccagttcttccagctgacaaactcctcctgctt
ccacctcccagaccaaaaaatgccatatttgaggatgaggagaagtcaaagacactgact
cgcctgttgaacagcactcaccctgaggacctgaaagcagccaacaaactgatccaggaa
atggtgcaggaggaccagaagcgggcggagaagttgtccaagcgtgtgaacgccatccag
gatgtgaatgagagtgtcagcctactgactcagctgctggaggactatgaccggaccacc
aacccacagagcaatgcagagctcatccaggacttgtaccagcgctgtgagaagatgaga
cccacattgttcagactggccagtgatacagaggacaatgatgaggctctggcggagatc
ctccaggccaacgacagcctgactcaggtcatcaacctgtacaggcagcaggtaaaggga
gaggtggtgaacgggaacaactcagctaatacgcgaaggctcacaggaagtagtgtggcg
ctacttgatctatcgggattggacacgtcacctccttcctacccagaattccccactcca
acagacagcctaagtgctccctctcaggagatgggcatcagtcttcttgatgatgagcta
atgtcactgggtttgagtgaggggacccacacctccaacccggcctcccagcctgaggac
tctaccgcctgggactctttccagtcttctgacagtgtggatattactgatatcccagca
gcgcctagtgtactactgagtccagatcggctcccctacacccagcctctttctactgga
gccacgtctggaagctcagccttagatgagttggatctgctggggaagaagctgctacag
cagtccctacctccagagggcctgcaggtcaaatgggacaagcctccgttcaaacctact
ctacgagatctccagaacaaatctggaagtaatccaagtcctatcccggccttctcccct
gagcacccggtggctcccctcggtgataggttgttggacacctctccggttcacacagtc
attccccctatagaaatgaccctgacagatgtttttgtgccacttgagtccattaagccc
agcagcctgttgcctgtgacggtgtttgatagccacagtttgcgggtgctcttccacttt
gcacgtgacactccgtcctctcttgctgatgtgctggtggtgatcatctccatgctctcc
tccgccccggttccagtcagcaacatcctctttcagccctctgtccctgacacaatgaga
gtgaagctacagcccccatcaggaacagagcttccagccttcaacccaatcctcccacct
gctgccatcacacaggtcctgctgctggccaaccctcacaaggagaaggtgcagttgcaa
tacaagctaaccttcatgctaggagaggaagaccatgatgaaagaggagttgtcgtccag
tttccaccttcagacacatggggcaatctgtaa
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