Oncorhynchus keta (chum salmon): 118365541
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Entry
118365541 CDS
T09424
Name
(RefSeq) phenylalanine--tRNA ligase alpha subunit
KO
K01889
phenylalanyl-tRNA synthetase alpha chain [EC:
6.1.1.20
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
118365541
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
oke01007
]
118365541
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
oke03016
]
118365541
Enzymes [BR:
oke01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
118365541
Amino acid related enzymes [BR:
oke01007
]
Aminoacyl-tRNA synthetase
Class II (U)
118365541
Transfer RNA biogenesis [BR:
oke03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
118365541
Prokaryotic type
118365541
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2d
PheRS_DBD1
PheRS_DBD3
PheRS_DBD2
tRNA_synthFbeta
tRNA-synt_2
tRNA-synt_2b
MarR_2
HTH_11
ARM_FBXO47
Motif
Other DBs
NCBI-GeneID:
118365541
NCBI-ProteinID:
XP_052347206
LinkDB
All DBs
Position
32:complement(28316415..28325935)
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AA seq
497 aa
AA seq
DB search
MADTGLVETLLRRVEKVDGGLDSQDVATSLGVDHQAIVGAVKSLLALGDVISAEQRSSKH
WELTGEGCEIAEQGSHEARVVSSIPEEGMPQSQLMKLAFGKVGFSKAMSNKWIRLDKSHE
GGPRIFKTVEHLEDLVRDKLLLVQKGQASQLEEKEKNELKKRKLLSEVTVKSYWITKGSC
FSTTITKQETELTPEMIASGSWKEKKFKPYNFEALGVAPDCGHLHPLMKVRTQFRQIFLE
MGFTEMPTNNFIESSFWNFDSLFQPQQHPARDQHDTFFLSDPAQAHEFPQDYLERVRKVH
SEGGFGSQGYKYDWKIEEAQKNILRTHTTAVSARMLYKLAQQEKFTPVKYFSIDRVFRNE
TLDATHLAEFHQIEGVVADYGLTLGDLMGILHQFFNKLGITKLRFKPAYNPYTEPSMEVF
SYHEGLKKWVEVGNSGMFRPEMLLPMGLPEGVTVIAWGLSLERPTMIKYGINNIRELVGH
KVNLQMVYDSPVCRLDS
NT seq
1494 nt
NT seq
+upstream
nt +downstream
nt
atggctgacactggtcttgtagaaacgcttcttcggcgggtggaaaaggtggacggtggt
ctcgacagtcaagatgttgcgaccagtctcggggtggaccaccaagctatcgtcggtgct
gtgaagagcctactggcacttggtgatgtgatctcagctgagcagcgctcctcgaagcac
tgggagctgactggggaaggctgtgagatagccgaacagggcagccatgaggcccgagtc
gtcagctccatcccagaggaagggatgcctcagagccagctcatgaaactagcctttggg
aaggtgggtttcagcaaggccatgtccaacaagtggatccgtctggacaagagccacgag
ggcggacccaggatcttcaagactgtggagcacttagaagacttggtgagggacaagttg
ctcctggtacagaaaggccaggcgtctcaactggaggagaaggagaagaatgagctgaag
aaacgcaaactgctctctgaagtgacggtcaagtcctattggatcacaaagggcagctgt
ttcagcaccaccatcactaagcaggagacagagctcacccctgagatgatcgcaagtggg
agctggaaggagaagaagttcaagccttataactttgaggccttgggtgtggccccagac
tgtggccacctgcatccgctcatgaaggtccgcacgcagttcagacagatcttcctggag
atgggcttcactgagatgcccaccaacaacttcattgagagctccttctggaactttgac
tccctgtttcagccccagcagcacccagccagggaccaacacgacaccttcttcctgtct
gacccagctcaggcccatgagtttccccaggactacctggagagagtgaggaaggtccat
tcagagggaggctttggctcacaggggtataagtatgactggaagattgaggaggctcag
aagaacatcctccgtactcacaccacagcagtcagcgctcgcatgctgtacaaactcgct
cagcaggaaaagttcacccctgtcaagtacttctccatcgacagagtattccgtaatgaa
actctggatgccacccacttggcagagtttcaccagattgagggagtggtggctgactat
ggccttaccctgggtgacctcatgggcatccttcatcagtttttcaataaactaggaatc
accaaattacgctttaaaccggcctacaatccatacaccgagccgagcatggaagtgttc
agctatcatgaagggctgaagaagtgggtggaggtgggaaactctgggatgttcaggcca
gagatgctgctgcctatggggctccctgagggggtgacggtcatcgcctgggggctgtct
ctggagaggcccaccatgatcaagtatggcatcaacaacattcgtgagttggtgggacac
aaggtcaacctgcagatggtctacgacagccctgtgtgtcgactggactcttag
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