Oncorhynchus keta (chum salmon): 118365551
Help
Entry
118365551 CDS
T09424
Name
(RefSeq) intraflagellar transport protein 56-like isoform X1
KO
K19685
intraflagellar transport protein 56
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
oke03037
]
118365551
Cilium and associated proteins [BR:
oke03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
118365551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ANAPC3
TPR_19
TPR_16
TPR_2
TPR_14
TPR_6
DUF5575
Motif
Other DBs
NCBI-GeneID:
118365551
NCBI-ProteinID:
XP_035603753
LinkDB
All DBs
Position
32:28712526..28719440
Genome browser
AA seq
582 aa
AA seq
DB search
MILSRVKPAAVGGEIPVNKKTKEKKPLLVEDFLIQRDYLGAITLLEFQRNVGKRGEDADL
WLAYCAFHLGDYKRAMEEYKALTDKPDCRPDVWVYLACTLFFLGLYKEAEEASRKAPKCQ
LQNRVLFHLAHKFNDEKQLMGFHQELEDVTEDQLSLASIHYMRSHYQEAIDIYKRILLQN
REKITETGEEASDCLCRDFLALNVYVALCYYKLDYYDVSQEVLAVYLQSVPDSTIALNLK
ACNHFRLYNGKAAETELENLIDISSSSFEFAKELIRHNLVVFRSGEGALQVLPALIDVIT
EARLNLVIYYLRQDDVQESYQLIKDLEPTTPQVQGSVSLNVHQRTEYILKGVVNAALGQE
MGSTDHLKIAQQFFQLVGGSASECDTIPGRQCMASCFFLLRQFEDVLIYLNSVKSYFYND
DAFNFNYAQAKAAVGNYREAEEIFLLIQNDRNKSDYVYLSWLARCYIMNQKARLAWELYM
KMETSAESFSLLQLIANDCYKMGQFYYSAKAFDILERLDPNPEYWEGKRGACVGIFQLIL
ASREPREALREVLPLLRNTGNPQVEYIIRILKKWAKDNRVSL
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atgattctgtccagagtaaagccagcagctgttggtggggagatcccagtaaataagaag
acaaaagaaaagaagccactgcttgtggaggacttcctaattcaaagagactatctgggg
gccattacattgttggagtttcagcgcaatgttggcaagcgaggggaggatgcagacctg
tggttggcctactgtgctttccaccttggtgactacaagagagccatggaggaatacaag
gccctgacagacaaaccagactgccgcccggatgtgtgggtctacctggcctgtactctc
ttcttcctggggctttacaaagaagcagaggaggcttcacgcaaggcccctaaatgccag
ctgcagaatcgagtactgttccatttggctcacaagttcaatgatgagaagcagctgatg
ggtttccaccaggagttggaggatgtgacagaggaccagctcagcctggcctccatccac
tacatgcgctcccactaccaggaggccatcgacatctacaaacgcatcctgctgcagaac
agagagaagataacggagactggagaggaggctagtgactgcttatgcagagacttcctg
gccctgaatgtgtatgtggctctgtgctactacaagctggactactacgatgtgtcccag
gaggtgctggctgtttacctacagagcgtcccagactccaccatcgctctcaacctcaag
gcctgcaatcacttcaggctctacaacggaaaagcagcagagactgagctggaaaacctg
atagatatctcctccagctcctttgagtttgccaaggagttaatccgacacaacctggtg
gtgtttcgtagtggggagggggccctgcaagtgctgcctgcactgattgatgtcattact
gaggctcgtctcaatctggtcatctactacctcagacaagatgatgtccaggagtcctac
cagctcatcaaagacttagaacccaccacaccacaggttcagggcagtgttagtcttaat
gtacatcagcgtacagagtacatcttgaagggggttgtgaatgctgcactcggacaggag
atgggatcgacagatcatctgaagattgctcagcagtttttccagctggttggtggctca
gctagcgaatgtgacaccatccctggcagacagtgcatggcttcttgtttctttctactc
aggcagtttgaagatgtgctcatctacctcaactctgtcaagagttacttctacaatgat
gacgccttcaacttcaactatgcacaggccaaagctgctgttggcaactacagggaggca
gaagagatcttcctgttgattcagaatgacaggaacaagagtgactatgtgtacctgagc
tggctggcacgctgctacattatgaaccagaaggcccgtctggcctgggagctctacatg
aagatggagacctcagcagagtccttcagcctcctgcagctcattgccaacgattgctac
aagatgggccagttctactactcagcaaaggcatttgatatcttggagagattggacccc
aaccctgagtactgggagggcaaaaggggagcctgtgtgggtatctttcagctaattttg
gcaagcagagaacccagggaggctttgagggaagtgctgcccttgctgaggaacactggg
aatcctcaggtggaatacatcatcaggattctgaagaaatgggccaaggacaacagggtt
tctctgtga
DBGET
integrated database retrieval system
