Oncorhynchus keta (chum salmon): 118365716
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Entry
118365716 CDS
T09424
Name
(RefSeq) integrin alpha-L-like isoform X1
KO
K05718
integrin alpha L
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04514
Cell adhesion molecules
oke04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118365716
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
118365716
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118365716
04515 Cell adhesion molecules [BR:
oke04515
]
118365716
04090 CD molecules [BR:
oke04090
]
118365716
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118365716
Cell adhesion molecules [BR:
oke04515
]
Integrins
Integrin alpha subunits
118365716
CD molecules [BR:
oke04090
]
Proteins
118365716
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
FG-GAP
Integrin_A_Ig_1
ITGAX-like_Ig_3
Integrin_A_Ig_2
VWA_2
FG-GAP_3
VWA_3
Copine
Mid2
vWA-TerF-like
Motif
Other DBs
NCBI-GeneID:
118365716
NCBI-ProteinID:
XP_052346501
LinkDB
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Position
32:complement(5953462..6033913)
Genome browser
AA seq
1190 aa
AA seq
DB search
MSRQGPLCLLTCVAAMAVSSMAFNIDEANPKIYKGEEKDFFGYKVLQFISGKEKGVMVSA
PYQKNGSGGICRCAQDRTNCTDCYTPQETDTIKYIGLSMVAQPTSPPTFTACSPGLAHEC
DGNSYLNSICYQFNSQLQITSNFTPAFQECTKKIVDLVFLFDGSASMTTEEFDENKGFIN
NIMTTLKNSSIKFAAVQFSTNTRTVFNFRDYQEGRALTKLWKEEHMADLTNTHKAIDFVL
KNIFEKQAAGATADATKVLVIITDGNPSDTDKRFNSIERSDKKNIIRFVIGVKNVDLTKL
KSLASEPKENNTFLIQDYNELKGILDNFQKKIFNIEGSKTALAGNLTKEMSQSGFSAVYV
NKDTLVLGSVGSNNWRGSLFETEGLRSEEREIQDPTLDKDSYMGYSVAVGKKNENLLYFT
GAPRSEHMGRILLFNKVNNNWTVAQSLPGEQMGSYFGAELSSVDIDSDGNTDFLLVGAPM
FRQPPREGRIYVYTLTDKLELRMEMNVSVPSRGRFGSSICSLTDLNGDGLKDVAVGAPLE
DDHRGAVYIYLGEKLKGIRPEFSQRISAVMMRSKLQFFGQTIDGKMDLGEDGLTDIVVGA
RGAVVVLRSRPVLSVSAHLHFYPAEISTDRFDCLAKEIISPMVTLTACFNMAEATKSKAE
VLSAGMNVSYLLDVDPVRQRSRAFYSDTNKGARRLLSTVELRKERTCFNHSVYMTQCVID
TLSPIIIQLVFSQSESQQEGLTVILNTDSPTQAVVEVPFEKNCKENETCLAELEVDFNFI
TSTLLVVDQSYFNVTIRLSNHGDDSFNTSLTLLYPPGLSFSMMHLLKSTRRTVFSCGGLE
GEMDRTTCSVSLPVYRSKTTAVFTSKFHILNTYDWKDTMEMTVIGLSDNGNSTNSSLTRT
IPVQFAIDLVAKALPQDSTTYMNFTLEDTSPKRLVNVYEVENLGFKSVPITVTFTFPTKL
EHKFEMKDYQISVLQNHTQCGKMINSTTEYCSPEKYCKSIECESFLLEKFLTVTFVLSGT
VSFKDLDQHAKRLSLPKKFTGERETVHFISFVKLSYDKKRYVQTASDPRDNSSSFHQTQI
DVQAELIIPPHRNLIIGTGVGVGLFLLIIITMSMYMLGCFKRKRPVDNAQEDEKEGEQCE
QELQPESGAVESNLLLDESQTENNGFPISEVVGEGLKEKQDVSVRSRLME
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgtccaggcaaggacccctctgcctgctcacctgcgtggcagccatggctgtctcttca
atggctttcaacatagatgaagcaaaccccaaaatctacaagggggaggaaaaggatttc
tttggttacaaggtcctgcagttcatttctggcaaggagaaaggggtaatggtcagtgcg
ccatatcagaagaatggatctggtggaatctgtagatgtgctcaagaccgaacaaactgt
acagactgttacactcctcaagaaactgacacaatcaagtacattggactgtctatggtt
gcacaacctacttctcctccaacgttcactgcctgcagccctggcctggcacacgagtgt
gatgggaactcctatctgaacagtatctgttatcagttcaacagccagctccagatcacc
tcgaacttcacacctgctttccaagaatgtactaagaaaatagtggacctcgttttcctc
tttgacggatcagcaagcatgacaacggaagaatttgatgaaaacaaaggtttcataaac
aatatcatgacaaccctaaaaaactcctcaattaagtttgcagcggttcagttctcaaca
aacaccaggacagttttcaacttcagagactaccaagaggggagagccttgactaaactt
tggaaagaagagcacatggctgatctaaccaacacacataaggcaatagactttgtcttg
aaaaacatttttgaaaaacaagctgccggcgccaccgcagatgcaactaaagtactggtc
ataataacagatggaaatcccagcgatactgataaaaggttcaactctatcgaaagaagt
gataagaaaaacatcatccgctttgtcatcggggtcaagaacgttgatttgacgaaactc
aagtccctggcatcagagccaaaagagaacaacactttcctcatccaggactacaacgaa
ctaaaaggaatcctagacaactttcaaaaaaagatcttcaacattgaaggttccaagact
gctctggctggaaacttgactaaagaaatgtctcagagtgggttcagtgctgtctacgtt
aacaaggacaccttggttctgggctcagtgggatcaaacaactggcgtggatctctcttt
gagactgagggtctgagatcagaggaaagggaaattcaggaccccacattggacaaagat
tcctatatgggatactctgtagctgttgggaagaagaatgagaaccttctatattttacc
ggagcaccaagatcagaacacatgggacggatcctactttttaacaaggttaacaacaac
tggactgtggcacaaagcttgcctggagaacagatgggctcctacttcggtgcagagctg
agttctgtggacatagactccgacggcaacacagacttcctcctggtgggtgcaccaatg
tttcgccaacctccgagagagggcaggatctacgtctacacactgactgataagctggaa
ctgaggatggagatgaatgtttcagtgccatctcggggtagattcggctcctccatctgc
tctctcacagacctgaatggagatgggctgaaggatgtagctgtgggcgctccacttgag
gacgatcacaggggggccgtgtacatctacctgggtgaaaagctaaaggggatccgccct
gaattcagccagcgcatctcagctgtgatgatgagatctaagctccagttctttggccag
acgattgatgggaagatggacctgggtgaggatggactgactgatatcgtagtaggagcg
cgtggtgcagttgttgtcttgaggtccagaccggtcctcagcgtctctgctcatctccac
ttctatcccgcggagatcagcactgatagatttgactgtctggcaaaagagatcatttcc
cccatggtcactttaacagcctgctttaacatggcagaggcaacaaagagtaaagctgag
gtgctgagtgcagggatgaacgtctcctacctgctggatgtggatccagtgagacagagg
agccgagccttttacagtgacacgaacaaaggggccagaagacttctctccacagtggag
ctgagaaaggagcggacttgcttcaaccactcagtctacatgacacaatgcgtgatcgac
acattatcgcccataatcatccaactagttttttctcaatctgaaagccaacaagagggt
cttactgtcattctgaatactgacagtcctacacaggctgtggtcgaggtgccctttgaa
aagaactgcaaagaaaatgaaacctgtttggcagagcttgaggtggacttcaactttatc
acatcaactttattagtggtggaccagagttacttcaacgtgactataagactgtccaat
cacggggatgactcattcaacaccagtctaactctcctctaccctcctggcctctcattc
tccatgatgcatcttctgaagtctacaaggagaacggtgttcagctgtggtggtctggaa
ggtgaaatggacagaactacatgcagtgtcagcctccctgtctaccgtagtaaaaccaca
gcagtgttcaccagtaaattccatattttgaatacatacgactggaaggacacaatggag
atgaccgtcatcggcctgagtgacaacggaaactcaaccaatagttcccttaccaggacc
atccctgttcaatttgcaattgacctggtagcaaaagcccttccccaagactccaccact
tacatgaactttactctggaggacacatcacctaaaagactggtgaatgtatatgaggtg
gagaacttgggatttaagtctgtaccaatcacagtcactttcactttcccaactaagctt
gagcacaaatttgaaatgaaggactaccaaatatctgtcttacagaaccatactcaatgt
ggaaagatgatcaattcaacaacagagtactgctctccagaaaaatactgcaagtccatc
gagtgtgaaagtttccttttggagaagtttttgacagttacatttgtgctgtctggaact
gtttccttcaaggacctcgatcaacatgcaaagagattgtcattgccaaagaaattcact
ggggagagagaaacagtccatttcatcagttttgtcaaactcagctatgacaaaaaacga
tatgtccagacagcaagtgacccaagggataactcttcaagcttccaccaaacacagatt
gatgttcaggctgagctcatcattcctccccatagaaacctgataatagggacaggagtt
ggagtaggactcttcctcctgatcatcatcacaatgtccatgtatatgctgggatgtttc
aagagaaaaaggcctgttgataatgcacaggaagatgagaaagaaggggaacagtgtgaa
caagagctacagcctgagagtggagcagtggagtcaaaccttctccttgatgaaagtcaa
acagaaaacaatggcttccccattagtgaggtggtaggggagggactaaaagagaaacag
gacgtgtcagtcagaagcaggctaatggagtag
DBGET
integrated database retrieval system