Oncorhynchus keta (chum salmon): 118365729
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Entry
118365729 CDS
T09424
Name
(RefSeq) spectrin beta chain, non-erythrocytic 1-like isoform X1
KO
K06115
spectrin beta, non-erythrocytic 1/4/5
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04517
IgSF CAM signaling
oke04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
118365729
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
118365729
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118365729
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
118365729
Intermediate filaments
Intermediate filament-binding proteins
118365729
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
SOS1_NGEF_PH
Motif
Other DBs
NCBI-GeneID:
118365729
NCBI-ProteinID:
XP_052346137
LinkDB
All DBs
Position
32:10428918..10526071
Genome browser
AA seq
2350 aa
AA seq
DB search
MTTVAAEYEHMEITQQYSSSDTVNNRWDDEWDNENSSARLFERSRIKALADEREVVQKKT
FTKWVNSHLSRVSCRITDLYRDLSDGRMLIKLLEVLSGERLPKPTRGRMRIHCLENVDKA
LQFLKEQRVHLENMGSHDIVDGNHCLTLGLIWTIILRFQIQDISVETDGDNKEKRSAKDA
LLLWCQMKTAGYPNVNIHNFSTSWRDGMAFNALIHKHRPDLIDFDKLKKSNAHHNLQNAF
NLAEQHLGLTKLLDPEDISVDHPDEKSVITYVVTYYHYFSKMKALKVEGKRIGKVLDNAI
ETEKMIEKYESLASDLLEWIEQTIIILNNRKFANSLNGVQQQLQAFNTYRTVEKPPKFTE
KGNLEVLLFTIQSKMRANNQKVYMPREGKLISDINKTWERLEKAEHERELSLRTELIRQE
KLEQLARRFDRKAAMRETWLSENQRLVSQDNFGFDLPAVDAATKKHEAIETDITAYEERV
QAVVSVAKALEAEKYHDIKRIAARKDNVIRLWEYLRELLKSRRQRLEMNLGLQRVFQEML
YIMDWMDEMKMMLLSQDYGKHLLGVEDLLQKHALVEADIGIQADRVKAVNNNAQKFAIDG
DVYKPCDPQVIRDRAAHMEFCYQELTQLAAERRARLEESHRLWKFFWEMAEEEGWIREKE
QILSSDESGKDLTGTVRLLSQHRTLENEMSGRAGHLQHTITEGQAMADGGHFGAAKIRER
ITNLRAQWAALEELAAARKAHLEEAYALHQFQADADDADAWTLDALRIVSSGEVGHDEFS
TQALVRKHKDAAAEVASYRPVIDALHEQAGALPEVQVQSEQVKGRLAGIEERYKEVAELT
RFRKQALQDALALYKMFSEADACEMWIDEKEQWLNSMEIPEKLEDLEVIQHRFESLEPEM
NNQASRVAVVNQIARQLMHNGHPSEKNIKAQQDKLNNRWSQFRDLADQKKESLISALGVQ
NYHLDCNETKSWIREKTKVIESTQELGNDLTGVMALQRKLTGMERDLAAIEDKLGDLRGE
AERLAGEHPDQAKAIKGRLAEITAVWEEMKATLRNREESLGEASKLQQFLRELDDFQSWL
SRTQTAVASEETPNTLAEAEKLLAQHEGIKNEIRNYEEDYQKMRDMGEMVTQGQTDAQYM
FLRQRLQALDTGWNELHKMWENRQNLLSQSHAYQLFLRDTTQAEAFLNNQEYMMAHTEMA
TTLEGAEVAIKQQEDFMTTMDANEEKINSVVEAGRRLASDGNINADRIQERAASIDDRHK
KNRKAALELLMRLKDNRDLQKFLQDSQELSLWINEKMLTAQDMSYDEARNLHSKWLKHQA
FMAELQSNKEWLDKIEKDGMQLVLEKPETESVVKEKLSALQKMWEVLESTTQTKAQCLFD
ANKTELFTQSCADLDKWLGGLEGQIQSDDYGKDLTSVNILLKKQQILENQVEVRQREVVE
LQSQALVLSQEGNVTEEVDCQRQMVEHKFKELLDPLRKRKNFLVASREIHQFNRDVEDEI
LWVEERMPIAISTEHGHNLQTVQLLIKKNQTLQKEIQGHQPRFDDIFERSESLLMEDSLA
VQAIRQHLADLQQLWGLMIEETEKRHARLEQSHNAQKYYFDAAEAEAWMSEQELYMMSEE
KAKDEQSSVAMLKKHQIVEQSVEDYAETVHQLSKTSRGLTAAGHTESERIGMRQSQVDKL
YAGMKDLSEERRGKLDERFRLFQLNREVDDLEQWIAEREVVAGSHELGQDYEHVTMLQER
FREFSRDTGNIGQERVDAVNRLSDELINAGHADAATVAEWKDCLNEAWADLLELIDTRTQ
ILAASYELHKFYHDAKEILGRIQDKHKKLPEEVGRDQNTVETLQRMHTTFEHDIQALGTQ
VRQLQEDAVRLQSAYAGDKADDIQRRESEVLEAWNTLLESCDVRRGHLLDTGDKFHFFSM
VRDLMLWMEDVIRLIEAQENPRDVSSVELLMNNHQGIKAEIDARNDSFTACIELGKSLLA
RKHYASEEIKDKLLQLMDKRKDMIDKWEDRREWLRLILEVHQFGRDAGVAEAWLLGQEPY
LFGPELGQSVDEVEKLIKRHEAFEKSAATWEERFSALERLTTLELLEVRRQQEEEERMRK
PPSPEPLPAQDSPRQSGVENGLQNGLPSDQDSPQNGLDRVEIMNGVAEQNSKDPSPIPSP
TADRRGKGSLSSTLLTQNHDTPVAQLEGFLHRKHEWEGHNKKASSRSWHNVYCVINNQEM
GFYKDNKGAGQGIPYHNAIPISLMGAVCDVAMDYKKKKHVFKLRVADGNEYLFQAKEEEE
MSTWIQAILNAGTPDKVSITPSNQSTPASSRAQTLPATVTLTTESSPGKREKDKEKDKEK
RFSLFGKKKL
NT seq
7053 nt
NT seq
+upstream
nt +downstream
nt
atgacgacagtagccgcggaatatgaacacatggagatcacgcagcagtacagtagcagc
gacacggtcaacaaccgctgggatgacgagtgggataatgagaacagctcggctcgcctg
ttcgagcgctcgcgcatcaaggccctggcagatgagcgcgaagtggtgcagaagaagacc
ttcaccaaatgggtgaactctcacctctcccgggtgtcctgccgcatcacggacctgtac
agggacctgagtgatggacgcatgctcatcaaactgctggaggtgctgtctggggagaga
ctgcccaagcccaccaggggccggatgcgtatccactgcctggagaatgtggacaaggcc
ctgcagttcctcaaggagcagagggtccacctggaaaacatgggctcacatgacatcgtt
gacggcaaccactgcctcaccctgggcctcatctggaccatcattctcaggttccagatt
caggacattagcgttgagactgatggagacaacaaggagaagagatcagccaaggatgcc
ctgctcctctggtgccagatgaagactgctggctatccaaacgtgaacattcacaacttc
agcaccagttggcgagacggcatggcattcaatgccctcatccacaagcacaggccagac
ctgattgactttgacaagctgaaaaagtctaatgcccaccacaacctgcagaatgccttc
aatttggctgagcagcatctggggcttaccaagctcctggacccagaggatatcagtgtg
gaccaccccgatgagaagtctgtcatcacatacgtggtgacatactaccactacttctcc
aaaatgaaggccctgaaagtcgaggggaaacgtattgggaaggtactggacaatgccatt
gagacagagaagatgattgagaagtacgagtctctggcctcagacctgctggagtggatc
gagcagaccatcatcatcctcaacaatcgcaagtttgccaactctttaaacggggtgcag
cagcagcttcaagccttcaacacatatcgcacggttgagaaaccccctaagtttactgag
aagggcaacctggaggtgcttctgtttaccatccagagcaagatgagggctaacaatcag
aaagtctacatgcccagggagggcaaactcatctctgacattaacaagacctgggagaga
ctggagaaggcggagcatgagcgggagctgtctctgaggacagagctgattcgacaggag
aaactggagcagctggctcgccgctttgaccgcaaggctgccatgagggagacctggttg
agtgagaaccagcgcctcgtctcacaggacaactttggcttcgaccttccagctgtggac
gcggccaccaagaagcatgaggccatcgagactgatattacagcttacgaggagcgtgtg
caggccgtggtgtccgtcgctaaggcgctggaggcagagaaataccacgacatcaaacga
atcgcagcacgcaaggacaatgtgatccggctgtgggagtacctgcgggagcttctgaag
tcgaggcgccagcgcctggagatgaacttgggtctgcagagggtcttccaggagatgctt
tacatcatggactggatggacgagatgaagatgatgctactgtcccaggactatgggaag
catctgctcggagtggaggatctcttgcagaaacatgccctggtggaggctgacatcggc
atccaggccgaccgagtcaaagctgtcaacaacaatgctcagaagtttgccatcgatggc
gatgtttacaagccctgtgaccctcaggtaatacgcgaccgcgcggcacacatggagttc
tgctatcaggaactgacccagctggctgccgagcgacgggcccgcctggaggagtcccac
cgcctctggaagttcttctgggagatggccgaggaggagggctggatccgtgagaaggag
cagatcctgtcgtcggacgagagcggcaaggacctgacgggcactgtgcgcctgctgagc
cagcaccgcaccctggagaacgagatgagtggccgtgcaggtcacctgcagcacaccatt
actgagggccaggccatggccgacggcggccacttcggcgctgccaagatccgtgaacgc
atcaccaacctgcgggcgcagtgggcagcgttggaggagctggcggccgcgaggaaggcc
catctggaggaagcgtatgccctgcaccagttccaggcggatgcagatgacgccgacgcc
tggaccctggatgccctgcgcatcgtgtccagtggcgaggtgggccatgacgagttctcc
acacaggccctggtgcgcaaacacaaggacgccgccgccgaggtggccagctatcggccg
gtgatagatgcgctccatgagcaggcgggcgccttgcctgaggtgcaggtccaatcggaa
caggtcaagggccgtttggcaggcatagaggagcgttacaaggaggtggccgagctgacc
cggtttagaaagcaggcactgcaggacgccctggccctctacaagatgttcagcgaggcg
gacgcctgcgagatgtggatcgatgagaaggagcagtggctcaacagtatggagatccca
gagaagctggaagacctagaggtcatacagcacaggttcgagagcctggagcctgagatg
aacaaccaggcatcacgcgtcgctgttgtgaaccagatcgccaggcagctgatgcacaac
ggacaccccagtgagaagaacatcaaagcccagcaagataagctcaacaacagatggagc
cagttccgggatctggcagaccagaagaaggagtctctaatctcggcgctgggtgtgcag
aactatcacctggactgcaacgaaaccaagtcatggatccgcgagaagacgaaggtcatc
gagtccacccaggagctgggcaacgatctgacaggtgtcatggcgctgcagcgtaaactc
actggcatggagcgtgacctggctgccatcgaggacaagctgggcgacctgcgcggcgag
gcagagcggctggccggcgagcacccggaccaggccaaagccatcaagggccgcctggcc
gagatcactgccgtgtgggaggagatgaaggccacactgcgtaatcgcgaggagtccctt
ggtgaggccagcaagctgcagcagttcctgcgcgagctggatgacttccaatcgtggctg
tcgcgcacacagacagccgtcgcctctgaggagacgcccaacacgctggccgaggcagag
aagctgctagcgcagcacgagggcatcaagaacgagatccgcaactacgaggaggactac
cagaagatgcgcgacatgggcgagatggtgacccagggccagaccgatgcccagtacatg
ttcctgaggcagcggctacaggccctggacacgggctggaatgagctgcacaagatgtgg
gaaaaccggcagaacctgctgtcccagtcccacgcctaccaactgtttctcagggacacc
acgcaggccgaggccttcctcaacaaccaggaatacatgatggcccatacagagatggcc
actacgcttgagggggccgaagtagccatcaagcagcaggaggacttcatgaccaccatg
gacgccaacgaagagaagatcaacagtgtggtggaggctggcaggcggctggcgagtgat
ggcaacatcaacgccgaccgcatccaggagagagcggcgtctattgacgacagacataag
aagaaccgcaaggctgctctggagctactgatgaggctgaaggataaccgggaccttcag
aagttcctacaggattcccaggagctgtccctgtggatcaatgagaagatgctcacggcc
caggacatgtcgtacgacgaggccaggaacctccacagcaaatggctcaagcatcaggcc
ttcatggccgagctgcagtccaacaaggagtggctggacaaaattgagaaggatgggatg
cagctggtgttagagaagcctgagacagagtctgtggtcaaggagaagctctcagccctc
cagaagatgtgggaagtgttggagtctaccacccagaccaaagcccagtgcctgtttgac
gccaacaagactgagctgttcacacagagctgtgctgacttggacaagtggctgggtggc
ctggagggacagattcaatctgatgactatggcaaagacctgaccagcgtcaatatcctg
ctcaaaaagcagcagatattggagaaccaggtggaggtccgtcagagggaggtggtggag
ctgcagagccaggcactggtcctcagccaggaagggaatgtcacagaggaggtggattgc
cagagacagatggtggagcacaagttcaaagagctgctcgacccgctgaggaagagaaag
aacttcctggtggcgtcccgtgagatccaccagttcaaccgcgacgtggaggatgagata
ctttgggtcgaagagaggatgccaattgcaatctccacagagcatggtcacaacctacag
accgttcaactgcttatcaagaaaaatcagaccttgcagaaggagatccagggacaccag
ccccgcttcgacgacattttcgagcggagcgagagcctgctgatggaggacagccttgcc
gtgcaggccatccgccagcacctcgccgacctgcaacagctgtggggtctgatgattgag
gagacagagaagcgtcacgcccgactggagcagtcccacaacgcccagaagtactacttt
gatgccgccgaggcagaggcctggatgagcgagcaggagttgtacatgatgtctgaggaa
aaagccaaggatgagcagagctctgtagccatgctgaagaagcaccagattgtggaacaa
tcggtggaggactacgctgagacagtccatcagctctccaagaccagcagaggcctgaca
gctgcaggacatacagagagtgagaggataggcatgcgtcagtctcaggtggacaagctc
tatgccggcatgaaggacctgtctgaggagaggcggggcaaactggatgagaggttccgc
ctgttccagctcaaccgcgaggtcgacgacttggagcagtggattgccgagcgggaggtg
gtggccggatctcacgagctgggacaggactacgagcatgtcactatgctccaggagcgc
ttccgggagttttcccgtgacacaggcaacatcggccaggagcgtgtggatgccgtcaac
cgcctgtccgacgagctgattaatgcgggccacgcagatgccgccacagtggctgagtgg
aaggactgcctcaacgaggcctgggctgacctgctggagctcatcgacacgcgcacgcag
atcctggccgcctcttacgagctacacaagttctaccacgacgccaaggagatcctgggc
cgcatccaggacaaacacaagaagcttcccgaggaggtgggacgtgaccagaacacggtg
gagacactgcagcggatgcacaccaccttcgagcacgacatccaggccctgggaacacag
gtgaggcagctgcaggaggatgccgtccgcctccagtcagcctacgccggtgacaaggca
gacgacatccagcggagagagagcgaggtgctggaggcctggaataccctgctggagtct
tgcgatgtccgcagaggccacctcctggacacgggtgacaaatttcacttcttcagcatg
gtgcgcgatctcatgctgtggatggaggacgtcatccgtctcatcgaagcccaggagaat
ccaagggacgtgtcctctgtggagttgttgatgaacaaccaccagggtatcaaggctgag
atcgacgcccgcaatgacagcttcaccgcctgcattgagttgggcaagtctctgctagcc
agaaagcactatgcatcagaggagatcaaagataaattactacagctgatggacaagagg
aaagacatgattgacaagtgggaggaccgacgggagtggttaagactgattttggaagtt
caccagtttgggagggatgcaggggtggcagaggcgtggctgctgggacaggaaccatac
ctgtttggcccggagttggggcagagcgtagacgaagtggagaaactgatcaagaggcac
gaggcttttgagaagtcggccgctacttgggaggagcgcttctcagcactggagaggttg
actacgttggagttattggaagtgagaagacagcaagaggaagaagagagaatgcgaaaa
cccccttcgccagagcctttaccggcgcaggactcaccacggcagagtggagtagagaac
ggactgcagaacggactgccctcagaccaggattctccacagaacggcttggatagagtt
gagatcatgaatggagtggcggagcagaactcaaaggacccgagccccattccctcaccc
acagccgaccggcggggcaagggcagcctgtcctccacgttgctgacccagaaccacgat
acgcctgtggctcagctggagggcttcctgcatcgcaagcatgaatgggagggacacaac
aagaaggcctcaagcagatcatggcataacgtgtactgcgttatcaacaatcaggaaatg
ggcttctacaaagacaacaagggtgctggtcaaggcatcccctaccataatgcgattccg
atcagtctaatgggggctgtgtgtgatgtggccatggactacaaaaaaaagaagcatgtc
ttcaaactcagagttgctgatggaaatgagtatctcttccaagccaaagaagaggaggag
atgagcacatggatccaggccattctgaacgcggggacacctgacaaggtatcgattacg
cccagcaaccagagcactccggcgtcgagccgagcccagaccctgcccgccactgtcacc
ctcaccaccgaatccagcccgggcaagcgggagaaagacaaagaaaaggacaaggagaag
cgattcagcctctttggcaagaaaaaactataa
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integrated database retrieval system
