Oncorhynchus keta (chum salmon): 118365802
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Entry
118365802 CDS
T09424
Name
(RefSeq) sterol regulatory element-binding protein 2-like isoform X1
KO
K09107
sterol regulatory element-binding transcription factor 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118365802
04131 Membrane trafficking [BR:
oke04131
]
118365802
Transcription factors [BR:
oke03000
]
Eukaryotic type
Basic helix-loop-helix/leucine zipper (bHLH-ZIP)
Ubiquitous bHLH-ZIP factors
118365802
Membrane trafficking [BR:
oke04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
118365802
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH_LHW
Syntaxin
COG6_N
CCDC93_CC
Motif
Other DBs
NCBI-GeneID:
118365802
NCBI-ProteinID:
XP_052347066
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All DBs
Position
32:27004331..27020141
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AA seq
1230 aa
AA seq
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MDSNVSGEYISTMENMDPTLSELGDEFTLGDIDEMLQFVSNQVGDFPDLFEDQMSSAGSL
QNGAGATPRPPPQAPQTPQTTTTVYQHSNVTLTPTQTLAQQSLPLTPPQTPVQTFSSGQH
QIRAPPLLQPRPQMQAIQPQPQMQAIQPQMQAIQPQMQAIQPQMQAIQPQMQAIQPQMQA
IQPQMQAIQPQMQAIQPQMQAIQPQMQAIQPQQQPTIQVHSQSIPMQTHSFPVHTLVQTH
NQALPIQSQAQTVMITSSGGQSRFIQNPVICHQSPTTSFQVLQPQMQSIMTSPQVQPMTI
QHQRLLQTGQTIQTLSTAPTVHTMQQQVQQLPLLVHQPQILKTENLVLTTLKPDGTQVLS
TMQNPGITTLTHPIQTQTLQVPTLMGSNILTTVPVMMGGGDKLPIKQLSSGTSHCVGGNR
QVMDHGMGMVMGPGGVMKEGERRTTHNIIEKRYRSSINDKILELRDLVMGGDAKMHKSGV
LRKAIDYIKYLQQVNHKLRQENLAHKMNKSVVLSDDVEMKPEMLMMSPPASESGSGSPRE
FSPYCIDSEPGSPLLDHEQVKSEPGSPSSVGVMDRSRLLLCALTFFCLSLNPLPSLLGSE
AQSSSGLTSAHRASRTLFSLPSQTHNFATWLWCLLPWLTVWMLSGVGAVWGCVRVLYLWE
PVTPLHSPKSVSFWRQRKQADLHLNRGDYTAAMASLKTCLSVLTRALPTTSWDLLFSLSW
NLIRYCLHHPTPLGWLVRQVGGKQKGEESKTSSRDAALVYHRLSQLQLTGKLPQRSGLWA
LSLSMSAVNLSESAQSKMAPAQQAQIYVTAATALRTVLGHHLSCLPGYLLSCAEGVASQS
DSKPIPDCLHWLFTPLGRQFFLSCDWSVKSESREGVYTSQRDPADPIAQLHRCFCEKLLE
RAVHSLIQPHTDREAGKPKNDSGEFSSALEFLHLLNSCTEESSSPPFPAPPNHTTMPVAD
PVSRWWALVLKAAAHWLQGDDVAVRSLLAEAERMPRALHTLDHPLPKAVLLLCKAVQMSL
SPLKGEGAVACLSHCDRASSYLRTSISVPLSAQSGNGLNKGVELLVCDLLLTLRTSLWQR
GSSSNGEPGPAPGSQLAGFQRDLSSLRRLGQCYRQAQHKVFLHETTVRLIAGASPTRTHQ
LLEHSLRRRTNNPGYTTAEGDCVLGERERAHAILLACRHLPLPLLTPPGHRARLLAEAKR
TLERVGDRRSLQDCQQILLRLSGGTTIAAS
NT seq
3693 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaacgttagtggggagtatatctcgaccatggaaaatatggatccgactttg
tcagaactaggggacgaatttacgctgggagacatcgatgagatgctccagttcgtcagc
aatcaggtgggggacttccccgacctctttgaggaccagatgtcctctgcaggctcccta
cagaacggtgctggggccaccccacgcccaccccctcaagccccacagacaccccagacc
actaccacagtttaccagcacagcaacgtgaccctcacccccacccaaacactggcccaa
cagtccctgcccctcaccccaccacagaccccagtccagacgttctcttcagggcagcat
cagatccgcgcccctcccctgctccagccccggccccagatgcaggccatccagccccag
ccccagatgcaggccatccagccccagatgcaggccatccagccccagatgcaggccatc
cagccccagatgcaggccatccagccccagatgcaggccatccagccccagatgcaggcc
atccagccccagatgcaggccatccagccccagatgcaggccatccagccccaaatgcag
gccatccaaccccagatgcaggccatccagccccagcagcaacccaccatccaggtccac
agccagagcatccccatgcagacgcatagcttccctgtgcacaccctggtccagacccac
aaccaggctctgcccatccagtcccaggcccagacagtgatgatcacatctagcggtggc
cagtcccgcttcatccagaaccctgtcatctgccaccagagtcccactacaagcttccaa
gtcctccaaccgcagatgcagagcataatgacatcaccacaggttcaacccatgaccatc
cagcaccagagactactgcagactggccagaccatccagactctctccaccgcgcctaca
gtccacaccatgcaacagcaggttcaacagctaccccttctggtccaccagcctcagatt
ctgaagacagagaatctggttctgaccaccctgaagcctgatgggacacaggttctgtcc
accatgcagaaccctgggatcaccaccttgacccatcctatccagacacagactctacag
gtaccgactctgatgggcagtaacatcctgaccactgtgcctgtcatgatggggggcgga
gacaagctgccaatcaaacagctgtcgtcaggcacctcccactgtgtaggtgggaacagg
caggtgatggaccacgggatgggaatggtgatgggtccagggggggtgatgaaggaggga
gagaggagaaccacccacaacatcatcgagaagaggtaccgctcctccatcaatgacaag
atcctggagctgagggacctggtcatgggcggcgacgccaagatgcacaagtcaggagtg
ctgaggaaagccatcgactacatcaaatacctgcagcaggtcaaccacaaactacggcag
gagaacctggcccacaagatgaacaagtcggtggtgctgtctgacgatgtggagatgaaa
ccagagatgctgatgatgtcacctccagcctcagagtctggttcaggatctcctcgtgag
ttctctccatactgcatcgactcagagcctggcagtcccttactggaccatgagcaggtg
aagagtgagcctggctcaccctcttccgtgggtgtgatggatcgctctcgtctcctcctc
tgtgccctcaccttcttctgcctctccctcaaccccctgccctctctcctgggatctgag
gcccagagcagctctggcttgacctctgcacacagagcctccaggacactgttctcatta
cccagccagacccacaactttgcgacctggctttggtgcctgttgccatggttgacggtg
tggatgttgagcggtgttggggcagtgtggggctgtgttagggtcctctacctctgggag
cctgtcacccccctccactcgcccaaatctgtctccttctggaggcagcgtaaacaagca
gacctacatctcaacagaggtgactatacagcagctatggccagtttgaaaacctgcctg
tcagtcttgaccagagccctgcccaccaccagttgggacctcctcttctcactctcctgg
aacctgattcgctactgtctgcatcaccccacccctctgggctggctggttcgccaggtt
ggtgggaagcaaaagggggaggagtccaagaccagctcccgggacgcagctctggtctac
cataggctgagccagctgcagctcacagggaagcttccccagcgcagtggcctgtgggct
ctgtctctgtctatgagtgccgtcaacctcagtgagagcgcccaaagcaagatggcccct
gcccagcaggcccagatctatgtcaccgcggcaacagctctgcgcactgtactgggccac
cacctctcctgcctgcctggttacctgttgagctgtgctgagggtgtggccagccaatca
gactccaagcccatccctgactgtctgcactggctcttcaccccattgggcaggcagttc
ttccttagctgtgattggtctgtgaagtctgagagcagagagggtgtgtacacttcccag
agagacccagctgaccccatcgcccagctgcatcgttgtttctgtgagaagctgctggag
agagctgtgcactccctcatccagccccacactgacagggaggcaggcaagcccaagaac
gactcgggggagttctccagtgccttggagtttctccacctattgaacagctgcacagag
gagtcctcttctcctcccttcccagccccacctaatcacaccaccatgccagtggcagac
ccagtgagtcgctggtgggcattggtcctaaaggctgctgcccattggctgcaaggagat
gatgtcgctgtgaggtcactgctggcagaggcagagcgcatgcccagagctctccatacc
ctcgatcatccgttgcccaaggctgtgctgctgctgtgtaaggcggtgcagatgagcctt
tctcctctgaagggagagggggcggtggcctgtctgtctcactgcgacagggccagcagc
tacctgcgcaccagcatctctgttcccctgtccgcccagtctggaaatggcctcaacaag
ggggtggagctcctggtctgtgacctcttgctgaccctcaggaccagcctatggcaaaga
ggaagcagcagcaatggggagccaggccccgcccctggctcccaattggctggattccag
cgggacctgagttcattgcgaagactgggccaatgctacagacaggcacaacacaaggtc
ttcctgcatgagaccacagtgaggctgattgctggagccagtcccacccgcacacaccag
ctactggagcacagcctccgacgcaggaccaacaaccctgggtacaccacggcagagggt
gactgtgttctgggtgagcgtgaaagggctcatgccatcctgctggcgtgccgccaccta
cccttacccctgctgaccccaccagggcaccgcgcccgcctactggccgaggccaagcgc
acccttgagcgtgtgggtgaccgccgctccctacaggactgccagcagatcctgctccgc
ctcagtgggggcaccaccatcgcggcctcctga
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