Oncorhynchus keta (chum salmon): 118365929
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Entry
118365929 CDS
T09424
Name
(RefSeq) laminin subunit beta-1-like isoform X1
KO
K05636
laminin, beta 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04510
Focal adhesion
oke04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
118365929
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
118365929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
OVT1
DUF2205
Motif
Other DBs
NCBI-GeneID:
118365929
NCBI-ProteinID:
XP_052347785
LinkDB
All DBs
Position
33:9190972..9230865
Genome browser
AA seq
1781 aa
AA seq
DB search
MLILLIASLLTLWWRSFAQLPEFGDVCTEGSCYPATGDLLIGRAHQLTASSTCGIEKPER
FCIVGHLEEEKKCFVCDSREMYDERLNHTTSHSIENLVTTFAPNRLKTWWQSENGVENVT
IQLNLEAEFHFTHLIMTFKTFRPATMVIERSMDFGKKWQVYRYYSYDCESAFPGISVGPM
VKVDGIICDSRYSDIEPSAEGEVIFRVLDPAFEIEDPYSPRIQNMLKITNLRVQFSKLHT
LGDNLLDSRDEVTEKYYYALFDMVVRGNCFCYGHASKCAPVDGIHVGTEGMVHGHCMCNH
NTEGLNCEHCKDFYNDLPWRPAEGHNTNACKMCECNHHSRSCHFDMAVYLSTGNVSGGVC
DECQHETTGRQCEQCRPFYYQHPERHLRDPNICEPCSCDPAGSLQGGACDGRTDVSAGLI
AGQCRCKTSVEGERCDHCRQGHYGLGQGPNGCLQCTCNPLGTLPGGSPCDMDTGNCFCKR
LVTGRNCNQCLPRHWGLSNDMDGCRPCDCDQGGAVNNDCSPISGQCQCREHMYGRRCDQL
ESGYYFISLDHYTYEAEDAKHGPGVTVVPRPYPLNRSPTWTGAGFVNVPEGAHLEFHINN
LPDSMDYDVLIRYEPQLPEQWEQVEIRVIRPYSMRVGQPVSPCENTLPGGDQQSVSLPPG
SRHVMLLRPVCLDKGRNYTLRLSLPLYSSLSDVQSPYTLIDSLVLIPRVHELELFEGSQG
EEAWDTFQRYRCLESSQSVIKSPMTDICNDYIFSVSALLHQGAMACQCDSQGSLSAVCDP
RGGQCRCRPNMAGRNCDRCAPATFQFSPSGCRPCECNPVGSVNAFCHEATGQCECVPGAS
GRQCAHCLPGYWGFPQCRPCQCNGNSDFCHPQTGECQGCRASTTGHMCERCLDGYHGDPV
LGLGGHCRPCMCPDGPGSGRQYADGCYQTANNYQLVCVCSPGYRGARCDECAPGHYGNPQ
VPSGRCLPCQCSDNIDQLDPGSCDARTGVCLKCLHHTEGYGCQRCKLGYYGNAATQSCRR
CMCYSVGTTSEACPFPVECHCDLQTGQCPCRPNVIGQNCDRCAPDTFNIGSGQGCQTCDC
DPTHSFGTSCNELSGQCSCRPGFGGRKCNECRDKFWGDPEVKCQACDCDLRGIASEQCHR
SSGQCVCVEGVSGPRCNQCARGYHGEFPACQRCHQCFDEWDSVVGELTNQVQRLKDHVTE
LQTNGVTAPYTDTVSSLEISANAISGIVENNPAIQKMEDVQQMMQQVTEMVADLNERLNV
SEDSLSRLVVNANYTEASLDTLREQAQELERTVKDIGDRIKTVKNSNIEGAMDTITDAHL
ESKSAEIRVNQTTSYPDNTLEQSATLRREAEARLSQNQAEFDLRQQKHTERLERLSMELE
TLDLSELSKQTCGAAGGGEGCAASPCGGVGCVSEDGTHRCGGDGCDGLVTQTQSTLKTVK
DFDQEILSTMQEVDKLSRMVWEVKVHADEAKLSAREVLLKSNQSRDVVEHTNEQLRSLIK
EIRDLLTNDRANVEVIEAVSNEVLALKMPTSPGQLEALTKEIRDRVGTLTSVEDILSQSA
NDIHTTEKLLEQARTASQEASEVKETAALVKEALDTTKHAQNAAIDAVKQVYNNTRGTLD
LITSVESETAESELRLSNATLRLLQLERDVTLLRESSLDTSHRTQNTERLSETAKQDAEW
ALQEFDSEVKGQYSIVEGLVVTKAVGVSDAKKRAELLQQEAKELLTQTSGKLQRLRELER
SYAANQRTLEAKAGQLAGLEKTARQLLDDISQKVMIYSTCS
NT seq
5346 nt
NT seq
+upstream
nt +downstream
nt
atgttgatattgctcatcgcatcacttttgaccctctggtggcggtcctttgcgcagctg
ccggagtttggggatgtgtgcactgaggggagctgctaccccgccaccggggacctgctg
atcggccgtgcgcaccagctcacagcctcttccacctgcggcattgagaagcctgaacgc
ttttgcattgttggtcacctggaggaggagaagaagtgttttgtgtgtgactccagggag
atgtatgatgagaggctgaaccacacgaccagccacagcatcgaaaacttggtcaccacc
tttgcccccaaccgcctcaagacctggtggcagtctgagaatggtgtggagaatgtgacc
attcaactgaacctggaagctgagttccacttcacacatctcatcatgacctttaagacg
ttccgtccggctaccatggtgatcgagcgttccatggattttgggaagaagtggcaggtg
taccgttactatagctacgactgtgagtccgccttccctgggatatccgtgggacccatg
gtcaaagtggacggcatcatctgtgactcacgctactctgacatagagccgtccgcagag
ggagaggtgatattcagggtgctggacccagcgtttgagattgaagacccttacagtccc
aggatacagaacatgctgaagatcactaacctgcgtgtccagttcagtaagctccacaca
ctgggtgacaacctgctggactccagagacgaggtcacagagaaatactattatgccctc
ttcgacatggtcgtccgcggcaactgcttctgctacggacatgcctccaagtgtgcccct
gtcgatgggatacatgtaggcacagagggcatggtccatggtcactgcatgtgtaaccac
aacacagagggtctgaactgtgagcactgtaaggacttctacaacgacctgccctggagg
cctgcagagggacacaacaccaatgcctgcaagatgtgcgagtgtaaccaccactccagg
tcatgtcacttcgacatggctgtgtatctgtctacggggaacgtgagtggaggagtgtgt
gatgagtgtcaacacgagaccacggggcgtcagtgtgagcagtgcagacccttctactac
cagcaccccgaaagacacctgagagaccccaacatctgtgaaccatgtagctgtgacccg
gcgggctccctgcagggtggtgcgtgtgacggccggacagacgtgtctgctggtctgata
gcaggacagtgtcgctgtaagaccagtgtggagggagagcgctgcgaccactgtagacag
ggacactatggcctgggacagggcccaaacggctgcctgcagtgtacctgtaaccctctg
ggaacgctacctggaggaagcccatgtgacatggacacaggaaactgcttctgcaaacgc
cttgtcaccggcaggaactgtaaccagtgtctgccgcgtcactgggggctgagcaatgac
atggacggctgcagaccatgtgactgcgaccagggcggagccgtcaacaatgattgttct
ccgatatcaggccagtgtcagtgtcgagaacacatgtatgggaggcgttgtgaccagctg
gagtcaggatactacttcatctccctggaccactacacctacgaggccgaggacgccaag
cacggccctggtgtgactgtggttcccaggccctatcctctgaaccgtagtccgacctgg
acaggggcagggtttgtcaacgtacctgagggagcccacctggagttccacatcaacaac
ctacctgactccatggactacgacgtgctgatccgctatgaaccacaattgcctgagcag
tgggagcaggtggagatcagagtgatacgtccgtactcaatgagagtggggcagccagtc
agtccttgtgaaaacacgctaccaggaggagatcagcagtcggtgtctcttcctccagga
tccagacatgtgatgctcttgaggcctgtgtgtctggacaagggacggaactacaccctg
cgcctcagtctgcctctctactcctctctcagtgacgtccaaagcccctacacactcatc
gactctttggtgttgattccgcgggtacatgagctggagttgtttgagggttctcagggc
gaggaggcgtgggatacgttccagaggtaccgctgtctggagagcagccagagcgtcatc
aagagccccatgacggacatctgtaacgactacatcttcagtgtgtctgccctgctacac
cagggggctatggcgtgccagtgtgactcccagggctcgctcagtgcggtgtgcgacccc
agaggcgggcagtgccggtgtcggcccaacatggcgggcaggaactgtgaccgctgtgcc
cccgccaccttccagttcagcccctcaggatgccgaccctgtgagtgtaaccctgtgggt
tctgtgaacgctttctgccacgaggccacaggtcagtgtgagtgtgtgccaggggcatca
gggcgtcagtgtgcccactgcctgccaggctactggggcttccctcaatgccggccctgc
cagtgcaacggcaacagcgacttctgccaccctcagactggggagtgccagggctgccgc
gcctccaccaccgggcacatgtgtgaaaggtgtctggatggttaccacggcgacccagtg
ttgggtttggggggtcactgccgcccctgcatgtgtccagatgggccagggagcggacgc
cagtatgcagacggctgctaccagaccgccaacaactaccagctggtctgtgtctgcagc
cctggatacagaggagccaggtgtgacgagtgtgccccaggacactatggtaacccccag
gtgcccagcgggcgctgtctgccctgccagtgtagcgacaacattgaccagctggacccg
gggtcctgcgacgctcgcacaggcgtctgcctcaaatgcctgcaccataccgagggctat
ggctgccagcgctgcaagctgggttactacggcaatgccgccacccagagttgcaggagg
tgtatgtgttattcagtgggcacgacgtcggaggcgtgtccattcccggtggagtgtcac
tgtgacctgcagactggccagtgtccctgccggcctaacgtgattggccagaactgtgac
cgctgtgcccctgatacgttcaacataggaagcggacagggctgccagacctgtgactgt
gacccaacccactcctttgggacatcgtgcaacgagctgtcggggcagtgctcatgcagg
cctggtttcgggggaagaaaatgcaacgaatgccgagataagttctggggagatcctgag
gtcaaatgtcaagcgtgtgactgtgacctgcgtggcatcgccagcgagcagtgccaccgt
tcgtccggccagtgtgtgtgtgtggagggtgtgtctggaccccggtgtaaccagtgtgcc
agagggtaccatggggagttccccgcctgccaacgatgccaccagtgcttcgacgagtgg
gacagcgtggtaggggaactgaccaaccaggtgcagcgtttgaaggatcacgtgacagag
ctccagaccaatggggtgacggcgccgtacacagacaccgttagcagtctggagattagt
gctaatgctatcagtgggatagtagagaacaaccctgctatacagaagatggaagatgta
caacagatgatgcagcaggtcactgagatggtggcagacctgaacgagaggctgaacgtc
tcagaggattccctgtcccgtctcgttgtcaatgccaactacaccgaggccagtctggac
acactgagagagcaggcccaagagctagagagaacagtcaaagacattggagaccgcata
aagactgtgaagaactctaacatagagggagcgatggacaccatcaccgatgcccacttg
gagtctaagagtgcggagatccgtgtcaatcagaccaccagttaccccgacaacactttg
gaacagtcggctacgctacggcgcgaagcggaggccagactgagccagaaccaggcggag
tttgacctgagacaacagaaacacacagagagactggagaggcttagcatggagcttgaa
actcttgacctatcagagctcagcaagcagacatgtggagcggctggtgggggggagggg
tgcgctgcgtcaccctgtggcggggtggggtgtgtgtcggaggacggcacccatcgctgt
ggtggagacgggtgtgacggtctggtcacacagacacaaagcactctgaaaacagtcaag
gacttcgaccaggaaatcctgtccaccatgcaggaagtggataagctctctagaatggtg
tgggaggtgaaggtgcatgcggacgaggccaagctgagtgctcgggaggtgctgctgaag
tccaaccagagccgagatgtcgtggagcacaccaacgagcagctccgcagcctcatcaag
gagatacgagacctactcactaacgaccgtgccaacgtggaggttatcgaagcggtgtcg
aacgaggtgttggccctgaagatgcccacgtcgcccgggcagctggaggccctgaccaag
gagatcagagacagggtgggaaccctcaccagcgtggaggacatcctcagtcagagtgcc
aacgacatacacactacagagaagctgctggagcaggctcgcactgccagtcaggaggcg
tctgaggtgaaggagacagctgccctggtgaaggaggctctggatacaactaagcatgct
cagaatgctgccatcgacgccgtcaagcaggtctacaacaacaccaggggtacacttgac
ctcatcacgtctgtggagtcggagactgcggagtcagagctgcgtctgagtaatgccaca
ctgcgtctgctgcagctggagagagacgtgactctgctgagagagagcagcctggacacc
agccaccgcacacagaacactgagagactgtctgagaccgccaagcaggacgcagagtgg
gccctgcaggagtttgactcggaggtgaagggtcagtacagtattgtggagggcttggtg
gtgacaaaggcagtgggcgtgtctgatgccaagaagagagcggagctactccagcaggag
gccaaggagctgctcacccagaccagcggaaaactacagagactcagagagttggagagg
tcgtatgcagccaaccagcgtactctagaggccaaggcaggtcagctggccgggctggag
aaaacagcacgccaactgctcgatgacatcagccagaaagtcatgatctacagcacctgt
tcttag
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