KEGG   Oncorhynchus keta (chum salmon): 118366035
Entry
118366035         CDS       T09424                                 
Name
(RefSeq) high mobility group-T protein-like
  KO
K10802  high mobility group protein B1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03410  Base excision repair
oke04140  Autophagy - animal
oke04217  Necroptosis
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118366035
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    118366035
  09143 Cell growth and death
   04217 Necroptosis
    118366035
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:oke03036]
    118366035
   03400 DNA repair and recombination proteins [BR:oke03400]
    118366035
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118366035
Chromosome and associated proteins [BR:oke03036]
 Eukaryotic type
  Nucleosome assembly factors
   HMG (high mobility group) proteins
    118366035
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     118366035
   MMR (mismatch excision repair)
    Other MMR factors
     118366035
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of colorectal cancer cells
   118366035
SSDB
Motif
Pfam: HMG_box_2 HMG_box HMG_WDHD1 HMG_box_5
Other DBs
NCBI-GeneID: 118366035
NCBI-ProteinID: XP_035604247
LinkDB
Position
33:complement(2212687..2215491)
AA seq 193 aa
MGKDPRKPRGKMSSYAYFVQTCRAEHKKKQPEASVNFAEFSKKCSERWKPMSPKEKGTFE
DMAKQDKVRYEREMKNYIPPNGQKKKRFKDPNAPKRPPSAFFIFCADFRAKIKSEHPGLS
IGDTAKKLGVMWNSSAAEEKKPYEKKAATLKEKYDKDIASYRTNGRVDTASSAAADDDDD
EDDDEDDDEDDDE
NT seq 582 nt   +upstreamnt  +downstreamnt
atggggaaagatcctaggaagccgagaggcaagatgtcctcatatgcttacttcgtgcag
acctgcagggcggagcacaagaagaaacagcccgaagccagcgtcaacttcgcggagttc
tccaagaaatgctcagagcgatggaagcccatgtctcctaaagaaaaaggaacgtttgag
gacatggcaaagcaagacaaggtccgctacgagagagaaatgaagaactacatcccaccc
aatggccagaaaaagaagaggtttaaggatcccaatgcccccaagagaccaccgtctgcg
ttcttcatcttctgtgctgacttccgggccaagataaagagcgagcacccaggcctgtcc
attggagacactgctaagaagctgggagtgatgtggaacagctctgcagctgaggagaag
aagccgtatgagaagaaggcagccacgctgaaggagaaatacgacaaggatattgcatca
taccgcaccaatggtagagtggatactgcctcctccgcagctgctgatgacgacgatgac
gaagatgatgatgaggatgacgatgaggatgatgatgagtag

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