Oncorhynchus keta (chum salmon): 118366095
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Entry
118366095 CDS
T09424
Name
(RefSeq) transcription intermediary factor 1-alpha-like isoform X1
KO
K08881
tripartite motif-containing protein 24 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
oke01001
]
118366095
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118366095
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118366095
Protein kinases [BR:
oke01001
]
Serine/threonine kinases: Other
TIF1 family [OT]
118366095
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118366095
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bromodomain
zf-B_box
ANCHR-like_BBOX
PHD
zf-RING_UBOX
zf-C3HC4
Trypan_PARP
zf-C3HC4_2
zf-RING_5
PHD-1st_NSD
PML_CC
DUF1351
Trm112p
PRANC
ParB
DUF5054
Motif
Other DBs
NCBI-GeneID:
118366095
NCBI-ProteinID:
XP_035604356
LinkDB
All DBs
Position
33:complement(5713559..5725625)
Genome browser
AA seq
1220 aa
AA seq
DB search
MDESPEAAVDNDDLVIIVENEAESLPAEEERAKQLGGSLGLMDTCPVCKLNFHNREPKLL
PCLHSFCNKCLPPPSRNLVNTEQRRDPQLQVDSSKPREILNVIRCPVCRQECWEVEVLDN
FFVKDSVEVPSSTVEKTSQVCMSCDDNTEATGFCVECVEFLCVTCIEAHQRVKFTRDHTI
RQKEEMSPEAVGASTQKPVFCDIHKQEPLKLFCETCDRLTCRDCQLLKHKDHNYQFLEDA
YRNHRQHLENMTHQLQEKRKAIEEVSNCINNGLQQVDENRKSVTNEIKKSICNLIMEINR
KGKILVNQLETLTKDHEVGLKKQQEDVSHLTRHLDHVINFTKWATASHSGTALLYCKRLI
LCQIHYLMRANCNASIVPQSSVRFQCRSGFWASNVDLGSLAVERIPGRQPSSMQQGFPPG
HPSQPGPGPRGEGPPGAFPPGSTAHQRGSTLAQLQLQVEKLAQHPNRAGQPPPNHWSWYQ
QGLKLPGPGPGGPPPQRPHQGGSPSQGPPNMVQIQQPGRSYGPPGPQTHPNPRSPTSMLQ
NAGFPPQSLRDLIHNSSFPPKPMDVLQGTSRYSHAPPNTGPISTQASIHQRNMMEAAQLR
RSDPSGSSSLSMPNPRASYAPSLATAFPDRHAQGRQNSPMSKSSSSEANIGSASWKRTEP
HAAAPPSAKRRRRSSPGPIIVIKDEPEDDDEVSFVQSSVGASASLPDSSTGIQPKPQQQS
LPAPMLEPQLEPEPQPEPQLEPEAWPGPQLEPQLEPEPQLEPEPQLEPEPQLEPEPQLEP
ESQLEAEARPESQLEAEARPESQLEAEARPESQLEAEARPESQLEAEAQPETQVELEADP
QPDREKAPGVSEDDPNEDWCAVCQNGGELLCCDRCPKVFHLNCHIPSLKESPSGEWFCSF
CRDLASPEMEYNPDSQGESPAMKEEPGSERFPPVDKRKCERLLLCIYCNEFSTDFQEPAS
PLSIPEYKELIETPMDLSIVKSRLESKESPRYCSAEEFVKDVRLIFRNCAKYYQADTEVG
GAGLSLEEYFEEQLKLLYQDRSFSGGREEGMIPPVEDEMEEGMEDDGMAPNEGDMPPVED
DLTPVEEGMPSMEKEGTEEAPVEGGMAEEGIPPIEESMEEEGEETSPVKGDSPPSDATEP
VDPSTRGASSPNLPSKDAPQPLSSTPDNPPCEEAPQPLSDTPDNPPDTSPADSQDTSPAA
GLAIENEGTTEEVRDEAEEE
NT seq
3663 nt
NT seq
+upstream
nt +downstream
nt
atggatgagagcccagaagctgctgtggacaacgatgaccttgttattattgtggaaaac
gaggcagagagcttgccagctgaagaggagagggcgaaacagctaggaggtagcctcggt
ctcatggacacttgccctgtctgcaagttgaatttccataacagagagccgaaacttctg
ccatgcctccactctttctgcaataagtgtcttccacctccttcaaggaacttagtcaac
actgaacaacggcgcgacccgcaacttcaagtggacagttcgaaaccacgtgagatcctc
aatgtgatccgctgcccagtgtgtcgacaagaatgctgggaggtggaggtgctcgataac
ttctttgtgaaggactctgtggaggttcccagcagcacagtggagaagaccagtcaggtg
tgtatgagttgtgatgacaacacagaggccacggggttctgtgtggagtgtgtggagttc
ctgtgtgtgacatgtattgaggcccaccagcgagtcaagttcaccagggatcataccata
cggcagaaggaagagatgtccccagaggctgttggtgcatccacacagaagccagtgttt
tgtgacatccacaagcaggagcccctcaagctgttctgtgagacctgcgaccgtctcaca
tgcagagactgtcagctgctcaagcacaaagaccacaattaccagttccttgaggatgcc
tacagaaaccacaggcaacacctggaaaacatgacacatcagctccaggagaagaggaaa
gccattgaagaagtgtccaattgcatcaacaatggactccagcaagtcgatgaaaaccgc
aaatctgtcaccaatgagataaagaaatcaatttgcaacttgatcatggagatcaacaga
aagggaaaaatcttggtcaatcaacttgagacactgactaaggaccatgaggtcggactg
aagaaacaacaagaagatgtcagccacctgaccagacatctagatcacgtcatcaacttc
accaagtgggccacagccagtcacagtggcacagctctgctgtactgcaagagactgatt
ctttgccaaatccattacctaatgagggccaactgtaacgcatccatcgtccctcagagc
tcagtccgcttccagtgtcgctccggtttctgggcctcaaatgtcgaccttgggtctttg
gcagtagagagaatccctggtcgtcagcccagttccatgcagcagggcttccctcctggc
caccccagccagcctggccccggccctagaggagagggccctcccggggcctttcctcca
ggctccaccgcccaccagcgtgggagcaccctggcccagctccagctgcaggtagagaag
cttgctcagcaccccaacagggctggacagccccctcccaatcattggtcctggtaccag
cagggtctgaaactcccggggccaggtccagggggcccacctccacagaggccccaccag
gggggttctccatcacagggtccccccaatatggtccagatccagcagccaggccggagt
tacggaccccccggcccccaaacccatcccaaccccaggagccccacctctatgctgcaa
aacgcaggcttccctcctcagtctctaagggatctcatccacaactccagcttccctccc
aaaccaatggatgtgctacagggtacctcccgctactctcatgcacctcctaacacagga
cccatcagcactcaagcctctatacaccagcgtaacatgatggaagccgcacaactgagg
aggagtgaccccagtggatcttcatcattatccatgcccaaccccagagctagttatgct
ccgagcctagccactgccttcccagacagacatgcacaaggaagacagaattcccccatg
tccaaatcttcctcctctgaagccaacatagggtctgcttcctggaagcgtacagagcct
catgctgcggctcccccctcagctaagcggaggcgaaggtcgtcccccggaccaatcatc
gtcatcaaggacgaaccagaggacgatgacgaagttagctttgtgcagtctagtgttgga
gcctcagccagcctgccagacagcagtacaggcatccagcccaagccccagcagcagtct
ctcccagcacccatgttggagccccagctagagccagagccccagccagagccccagcta
gagccagaggcctggccagggccccagctagagccccagctagagccagagccccagcta
gagccagagccccagctagagccagagccccagctagagccagagccccagctagagcca
gagtcccagctagaggcagaggcccggccagagtcccagctagaggcagaggcccggcca
gagtcccagctagaggcagaggcccggccagagtcccagctagaggcagaggcccggcca
gagtcccagctagaggcagaggcccagccagagacccaggtagagctagaggctgacccc
caaccagaccgagaaaaggccccaggtgtctctgaagatgacccgaatgaagactggtgt
gccgtgtgtcagaatgggggagaactgctctgctgtgacagatgtcccaaagtcttccat
ctgaactgtcatataccttcacttaaagagtctcccagtggtgagtggttctgttcgttc
tgtcgtgacctggccagtcctgagatggagtataacccagatagccagggagaatcacca
gccatgaaggaagagccaggatcagagagattccctccagttgataagaggaaatgtgag
agactgttgctctgcatctactgcaacgagttcagtacagatttccaggagcctgcctca
ccgttgtcaatcccagagtataaggagctgattgagactccaatggacctgtctatagtg
aagagcaggctggagtctaaggagagcccacgttactgcagtgctgaggagtttgtcaag
gatgtcaggctcatattcaggaactgtgcaaagtattaccaggcagacactgaggtggga
ggtgcaggactgagcctggaggagtactttgaagagcagctcaagctcctctaccaagac
aggagcttctctgggggcagagaggagggaatgataccccctgtggaggatgagatggaa
gaagggatggaagatgacgggatggctcctaacgaaggggatatgcccccggtcgaggac
gatctaacacctgttgaagaagggatgccttctatggagaaagaaggaacggaagaggct
cctgtagaaggagggatggcggaagaagggatacctcctatagaagagagcatggaagag
gaaggggaagagacttctccagtgaaaggagactcaccaccttctgatgctacagaacca
gtagatccatcaacaaggggtgcatcatcacccaaccttcccagcaaggatgctcctcaa
cccctctcctcaaccccagacaaccctccctgcgaggaggccccccaacccctctcagat
accccagacaaccctcctgacaccagccctgctgactcccaggacaccagccctgctgca
ggcttagccatagaaaatgaggggacgactgaagaagtgcgagacgaagcagaagaggaa
tga
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integrated database retrieval system
