KEGG   Oncorhynchus keta (chum salmon): 118366164
Entry
118366164         CDS       T09424                                 
Name
(RefSeq) transportin-3-like isoform X1
  KO
K15436  transportin-3
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03013  Nucleocytoplasmic transport
oke03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    118366164
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    118366164
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:oke03016]
    118366164
Transfer RNA biogenesis [BR:oke03016]
 Eukaryotic type
  tRNA transport factors
   tRNA import factors
    118366164
SSDB
Motif
Pfam: TPR_TNPO3_IPO13_4th TPR_TNPO3_IPO13_3rd TPR_TNPO3_IPO13_2nd Xpo1 IBN_N KAP122_middle HEAT_MROH2B_C
Other DBs
NCBI-GeneID: 118366164
NCBI-ProteinID: XP_052347764
LinkDB
Position
33:8644294..8662020
AA seq 921 aa
MEKPTVALVYQAVQALYHDPDPAGKERASVWLGELQRSMYAWELADQLLQLKQDVESCYF
AAQTMKMKIQMSFFELPPETHIALRDSLLSHIQSLKDLSPIIVTQLALAIADLALQMASW
KGCVHTLIEKYSNDVSSMTFLIEILTVLPEEVHSRSLRIGANRRTEIIEDLAYYSSTVVT
LLMTCVEKSGSNEKMLIKVFRCLGSWFNLGVLDSNFMANNQLLMVLFQVLQRDETSTNLH
EAASDCVCSALYAIENVDTHMPLAQQLFQGVLTLETAYHMAVAREDLDKVLNYCRIFTEL
CETFLETTVRSPGQGMGDLRTLELLLICAGHPQYEVVEISFNFWYRLGENLYKTNDPALH
GIFRPYIQRLLHGLARHCQLDPDHEGIPEDTDDFGEFRMRVSDLVKDVIFLVGSMECFSQ
LYSTLKEGNPPWEVTEAVLFIMAAIAKSVDPENNPTLTEVLEQVVLLPETVHIAVRYTSI
ELVGEMSEVVDRNPRFLDPVLNYLMKGLREKTLASVAAKAIHNICSVCRDHMAQHFQGLL
DIARALDSFALTTEAAVGLLKGTALVLARLPLEKIAECLSDLCAVQVMALKKLLSQDPRN
GKAADPTVWLDRLAVIFRHTNPIVENGQTHPCQKVIQEIWPVLSETLNTHQADNRIVERC
CRCLRFAVRCVGKGSASLLQPLVTQMVSVYQVYPHSCFLYLGSILVDEYGMEEGCRQGLL
DMLQALCMPTFQLLEQTNGLRNHPDTVDDLFRLATRFVQRSPITLLSSGIIVHIIQCAIA
ATTLDHRDANCSVMKFVRDLIHTGVSNDHEDDFELRKQLIGQAMGQHGQQLVTQLMHTCC
FCLPPYTLPDVAEVLWEIMVFDRPTFCRWLENALKGLPKETSGGAVTVTHKQLTDFHKQV
TSAEECKQVCWAIREFTRLFR
NT seq 2766 nt   +upstreamnt  +downstreamnt
atggagaaaccgacagtcgcacttgtgtatcaagctgttcaagctctttatcatgatccg
gaccccgccggcaaagagcgagcctctgtgtggctgggggagctacagagatcgatgtac
gcgtgggagttggcagaccagctcctccagctgaaacaggatgtggaatcttgttacttt
gccgcccagaccatgaagatgaagatccagatgtcgttctttgagcttcccccagagacc
catatcgccctccgagactccctgctctcgcacatacagagcctcaaagacctctccccc
atcatcgtcacccagctcgctctggccattgcagacctcgccctacagatggcctcctgg
aagggctgtgtccacaccctcattgaaaagtatagcaatgacgtcagctccatgacgttt
ctgatagagatccttacagtgctccccgaggaggtccacagccgctccctacgcatcgga
gccaatcgcaggacagagatcatcgaggacctggcctattactccagtactgtggtcacc
ctactgatgacgtgtgtggagaagtctggcagcaatgagaaaatgctgatcaaggtgttc
cgctgtctgggcagctggttcaacctgggagtcctggacagcaactttatggccaacaac
cagctcctcatggtccttttccaagttctgcagagagacgagacgtccaccaacctgcac
gaggccgcgtccgactgtgtgtgttcagcgctgtacgccatcgagaacgtggacacgcac
atgcccctggcccagcagctcttccagggcgtcctcacgctggagacagcctaccacatg
gccgtggcacgggaggacctcgacaaagtgttaaattactgtaggatcttcactgagttg
tgtgagacgtttctggagacgacagtcaggagtccaggccagggcatgggagacctgcgg
acgcttgagctactgctcatctgtgcaggacaccctcaatatgaggtcgtggagatctcc
tttaacttctggtatcgtctgggagagaacctgtataagaccaacgaccctgccctccac
ggcatcttcagaccctatatccagagactgttgcacggcctggcccgccactgccaacta
gaccccgaccacgagggcatcccagaagatactgatgactttggggagttcaggatgagg
gtgtctgatcttgtgaaggatgtaattttccttgtgggctccatggaatgtttctcccag
ttgtactctactctaaaagaagggaaccctccctgggaggtgactgaggctgttctcttc
atcatggccgccatcgccaagagtgtagaccctgagaacaaccccaccctgacagaggtg
ttagagcaggtggtgctgctgccagagactgtccatatcgccgtgcgctacaccagcatt
gagctggtgggggagatgagcgaggtcgttgaccgcaacccgcggttcctagaccccgtg
ctgaactacctgatgaagggcctgagggagaagaccctggcttccgtggcggccaaggcc
atccataacatctgctctgtgtgtcgggaccacatggcccagcacttccagggcctgctg
gacatcgcccgtgccctcgactccttcgccctgacgaccgaagccgccgtaggcctcctc
aaaggtacagccctggtcctggctcgcctgcccctggagaagatcgccgagtgtttaagt
gacctgtgtgctgtgcaggtcatggccctcaaaaagcttctctctcaggaccccaggaat
gggaaagctgctgaccccactgtctggctggacagactagccgtcatcttccgacacaca
aaccccatcgtagagaatggacagacacacccatgtcagaaagttatccaggagatctgg
ccggtcctatcagagactctgaacacacaccaggctgataaccgcatcgtggagcgctgt
tgtcgctgcctgcggtttgctgtgcgctgcgtgggcaagggctctgcctctctactacag
ccactcgtcacacagatggtcagtgtgtatcaggtgtatccccactcctgcttcctgtat
ctgggcagcatcctggtggatgagtacggcatggaggagggctgcagacaaggtctactg
gacatgttgcaggctctttgtatgcccaccttccagctattggagcagaccaacggcctc
cgtaaccacccagacacagtagatgacctcttcagactcgctaccaggtttgtccagcgt
agtcccatcaccctgctcagcagtggcatcatcgtccacatcatccagtgtgccatcgcg
gccacgacactggaccaccgggatgccaactgcagcgtcatgaagtttgtcagagacctc
atccacacgggcgtcagcaacgaccacgaggatgactttgagctgcggaagcagctaata
ggccaggccatggggcagcacgggcagcagttggtcacccagctcatgcacacatgctgc
ttctgcctgccaccttacacactccccgatgtggctgaggtgctctgggagatcatggtg
ttcgacaggccgacgttctgccgctggctggagaatgcgctgaaggggcttcctaaagag
acgtcagggggggcggtgaccgtcacacacaaacagctcacagacttccacaagcaggtc
accagtgcagaggagtgtaagcaggtgtgctgggctatccgggagttcaccagattgttc
cgatag

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