Oncorhynchus keta (chum salmon): 118366261
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Entry
118366261 CDS
T09424
Name
(RefSeq) caprin-2-like isoform X1
KO
K18744
caprin-2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118366261
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
118366261
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Gene cluster
GFIT
Motif
Pfam:
C1q
Caprin-1_dimer
Caprin-1_C
Motif
Other DBs
NCBI-GeneID:
118366261
NCBI-ProteinID:
XP_035604688
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Position
33:14401677..14409785
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AA seq
959 aa
AA seq
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MVQLSPSPARDASPSPECSERGRQGSPKTGSPKMGSHGGLSPLQLALGTSIPNYQGYESY
IEDGLICLKHKIRNLEKKKIKLEDYRKRLKHGDSLNQDQIDAVEKYDEVIHNLQFAQELH
KTLGSLTQELLKAQKKALRKEQMAKQEVEKRRLCVVLQVKFLLQTLLQHEHIRKDLLSAR
NPQLKVAELQSLLELAELLGVKRDNNVSLEEQMESAALVYLDLLEGNNKAVAGTTYKVLK
AKLAKLMDCGYFDCVPPPPSKSPKEVEDPMTKKTVSETASLSTLMMSNKKDVPSREFLNR
HYLPDTDPNGCRDTPVTPNWKAEFQAMKEQEPPDSWDMESDSTQPVVQKPWRGAAVFISK
VPVTTKKENAEPKQRRAKSKRERDATAALRVDTPVEVFNSQSSLPKDPILPKDPILRKQQ
LEDLMTKIRGSFSFMQDSLLDGEGSSTNGHPRLGRQASGSPSPLGSLPQQIQRESRRSPV
DLLPKTLHSTPLPSKLLPVDDEPNMTNGDGGCLESCDLDLTTEDLAHVIAIDPFLLLSES
ETACPSPTAPPPFYRRESSITLDEKTSARTPISESGKQSPCNGVVPPCTPTPTQGQPFST
PPSRRTLSMAPSVPFQTMHSVFKVNAPLLPTGDFKSDIIPYSDSGNDLCYVTTSTQTPPD
FAPLEDEHLQSVNQSECLVGGGGQIFLSPSQSGGTMGRSDQSYYRGSVRGIARGGKGLAH
SYFRSPGGHRGGSFIPQAHLYGARDTGYQHSYRRGGGNAGQRHNNSGWSDSSQVSSPDRE
GNYSLVDSAHGDSLQGVGMDLTPQVTPHAPHTLMHVPMYPLPQHPQPLRVAFTAARTANY
TPGTLDQPITFDQLHSNLGEMFNTNVGRFICPANGTYVFLFHILKLAVNVPLYVNLMRND
EVMVSAYANDGAPDHETASNHSILQLYQGDQVWLRLHRGSIYGSSWKYSTFSGFLLYQD
NT seq
2880 nt
NT seq
+upstream
nt +downstream
nt
atggtgcagctgtctccatccccagcccgggatgcgtctccttcacctgagtgctccgag
agggggaggcaggggagcccaaagacaggtagccccaagatgggctcccacggtgggctg
agtcctctccagctagcactgggaacctccatccccaactaccagggctacgagagttac
atcgaggacggcctcatctgcctcaagcacaagatccgcaacctggagaaaaagaagatt
aaattggaagactacaggaagcgtttgaaacatggggattcactcaatcaagaccagata
gatgcagtggagaagtatgacgaagtgatccacaacctgcagtttgcccaggagctgcac
aagaccctggggagcctaacacaggaactgctaaaagcccagaagaaggcgttgaggaag
gagcagatggccaagcaggaggtagagaagaggaggctgtgtgtagtgctgcaggttaag
ttcctcctgcagaccctgctgcagcacgagcacatcaggaaggacctcctctctgcccgc
aacccccagctcaaggttgcagagctacaaagcctgcttgagctcgctgaactactgggg
gtgaagagggacaacaatgtgagtttggaggagcagatggagagcgcagccctggtctac
ctggacctgctggaggggaataataaagctgtagctggaaccacctacaaggtcctgaag
gctaagttggcgaagctgatggattgtgggtactttgattgtgtaccgccgcctccgagc
aagagtcccaaggaagtggaggatcccatgaccaagaagactgtgtctgaaacagccagc
ctctctaccctaatgatgtcaaacaaaaaagacgtgcctagcagagagtttcttaacaga
cactacctgcctgacacagaccccaatgggtgtcgagacactcccgttactccgaactgg
aaggctgagttccaggccatgaaggaacaggagccaccggactcgtgggatatggagtct
gactccactcagcctgtagtccagaaaccatggagaggggcggctgtgttcatctccaaa
gtgccggttactaccaagaaagaaaatgctgaacccaaacagagaagagcgaagtctaaa
agggagcgagacgccacagctgcacttcgtgtggacacccctgtggaggtgttcaactcc
cagtcttccttgcccaaggaccccatcctgcccaaggaccccatcctgcgcaagcagcag
ctggaggacctgatgaccaagatcagaggctccttcagcttcatgcaggattctcttctg
gatggagaaggatcatccactaacggccatcctagactgggccggcaagcctctggatcc
ccctctccactcggtagcctaccacaacaaatacagagagagtcaaggagaagcccagtg
gaccttctccctaaaacactgcattccactccattgccttctaaactcctccctgttgat
gacgaacccaatatgaccaatggagacgggggttgtctagagagctgtgacctggacctg
actacagaggacctggctcatgtcatagccattgatccatttctgctgctgtctgagagt
gagactgcctgcccctctcctacagctcctcctcccttctaccgtagggagtcctccatc
accctggacgagaagacctctgctcggactcccatctctgaatctgggaagcaatccccc
tgtaacggggtagtgcctccttgcaccccaacccccacccaggggcagccgttttctacc
cctcccagcagacgtacactcagcatggccccctctgttcccttccagaccatgcattca
gtattcaaggtgaatgcccccttacttccgactggagactttaaatctgatattatcccc
tattcggactccggcaacgacctgtgctatgtcaccaccagcacccagaccccaccggat
tttgctcccctggaggacgaacacctacagtcggtgaaccagtcggaatgtctggtgggt
ggtggtgggcagatcttcctgtcccctagccaatcaggtggcaccatgggccgttctgac
caatcatactacagaggatctgttagaggtattgcacgtggtggcaaggggctggcacac
tcctactttcgctctcctggtgggcacagaggaggaagcttcatcccccaggctcacctg
tacggcgctcgggacactggctaccagcacagctacaggcgtggtggaggcaatgcagga
caaaggcacaataatagtggttggagtgactcctcccaggtgagcagcccagaccgggag
ggcaactactccctggtggactccgcccacggcgactcgctgcagggtgttggcatggac
ctcaccccccaggtgacccctcatgccccccacaccctgatgcacgtacccatgtacccg
ctcccccagcatccccagcccctccgcgtggccttcacagcagcccgcacagccaactac
accccgggcaccctggaccagcccatcaccttcgaccagctccacagcaacctgggggag
atgttcaacaccaacgtgggtcgtttcatctgcccagccaacggcacctacgtcttcctc
ttccacatcctcaagctggcggtcaacgtgccgctctacgtcaacctgatgcgcaacgac
gaggtgatggtgtctgcgtatgccaacgacggggctccggaccacgagacggccagcaac
cactccatcctgcagctgtaccagggagaccaggtgtggctgcggctgcaccgcggatcc
atctatggcagcagctggaagtacagcacattctctggcttcctgctctaccaggactga
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