Oncorhynchus keta (chum salmon): 118366296
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Entry
118366296 CDS
T09424
Name
(RefSeq) neuroepithelial cell-transforming gene 1 protein-like isoform X1
KO
K20683
Rho guanine nucleotide exchange factor 3/8
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118366296
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118366296
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH_5
PH
PH_13
Motif
Other DBs
NCBI-GeneID:
118366296
NCBI-ProteinID:
XP_035604746
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Position
33:17558976..17596974
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AA seq
621 aa
AA seq
DB search
MEETGEAQVQISIPEKQNDRPKRKANMKRMFTIDDETSPERNNNSKSRPGLRRGSSFTFL
TPGPQWDFSLKRKCREKDESDAVSLCSFDFKEPSNKRVRPLGRVTSLANFISPVRNGAVR
RFGQTIQSISFRGDGNGGKTPGVPQKPCSKAAAPTPPKRRNSTLWSETLDVHQKGTFSTK
EIKRQEAIFELTRGEQDLIEDLQLARKAYHDPMLKLSIMSEEELSHIFGDLDAYIPLHED
LLAQLARATGPDGTVGQIGQIVVSWLPGLNAYRDYCSNQVAAKALLDQKKQDRRVQDFLQ
RCLESPFSRKLDLWSFLDIPRSRLFKYPLLLKEILKHTAPEHPDTPHLELAITIIQGVLS
DINMKKGESESQYYIDKLEYLDDRQRDPRIDQCKSLLCHGELRNKSGTKLHVFLFTELLV
MTRPVTRNEHHCFQVYRQPIPVQDLVLEDLQDGDVKMGGSFRGAFSNSDKAKNIFRVRFH
DPSRGQSHTLQVNDVFHKQQWLNCLRSAISVHHPADVTTPTSSPAADAHSKRHSSKISSV
IHTEEADENCPLTPAGATSASSSLCGDETPSPTSTSPSSSSPSSRSSSSSSSPLSSPSPK
HKTKKDKRSLCALGKRKETMV
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaccggtgaagcacaggttcaaatttcgataccagagaagcagaatgacaga
ccaaagagaaaggcaaacatgaagaggatgttcaccatagatgatgagacatcccccgag
agaaataacaatagcaaatcaaggcctggactgagaagagggagctccttcaccttcctc
acccctggacctcaatgggacttcagtctgaagcggaagtgcagagagaaggatgagtct
gatgcagtcagcctgtgcagctttgacttcaaggaacccagcaacaagcgtgtccgtcct
ctcggcagagtgacctcgctggctaacttcatctcccccgtgaggaatggggccgtccgg
cgcttcggccagaccatccagtccatatccttccggggcgatggcaatggtggcaagacg
ccgggcgtgccccagaagccatgcagtaaggcggcggcgcccacgccgcccaagagacgc
aacagcacgctgtggtcggagaccttagacgtccaccagaagggcaccttctccaccaag
gagatcaagagacaggaggccatatttgagttgactcgcggagaacaggacctgattgag
gacctccagctcgcacgcaaggcgtaccacgaccccatgctgaagctgagtatcatgtcg
gaggaggagctgagccatatcttcggggacttggatgcctacatccccctccacgaggac
ctgctggcccagctggccagagccaccggccccgacggcaccgtgggacagataggacaa
atcgtcgtcagctggttgccagggctgaatgcataccgagactactgcagtaaccaggtg
gcagccaaggccctgttggaccagaagaaacaggaccggagggtgcaggacttcctgcag
cgctgcctggagtctcccttcagcaggaagctggacctgtggagcttcctagacatcccc
cgctcccgcctgttcaaataccccctcctgctcaaggagatcctcaaacacacggcgccc
gagcaccctgacacgccccacctggagctagcgatcaccatcatccagggtgtgttgtct
gacatcaacatgaagaagggtgagtcagagagccagtactacatagacaagctggagtat
ctggacgacaggcaaagagacccgcgcatcgaccagtgcaagagtctgttgtgtcacggc
gagctacgcaacaagagcggaacaaagctgcatgtgttcctgttcacagagctgttggtg
atgacccggcctgtgacgcggaacgagcaccactgtttccaggtgtaccggcagccaatc
ccggtgcaggacctggtgctggaggacctgcaggatggagacgtcaaaatgggtggctcc
ttcagaggagcattcagtaactcagacaaagccaagaacatcttccgtgtgcgtttccat
gacccgtctcggggccagtcccacacgctgcaggtcaacgacgtcttccacaagcagcag
tggctcaactgcctgcgcagcgccatctccgtccaccaccccgccgatgtcaccacgccc
acttcctcccctgcagccgacgcccactccaagcggcattcctccaaaatctcctccgtc
atccacacggaggaggccgacgagaactgccctttgacgcccgcaggtgcaacgtccgcc
tccagttctctatgcggggacgagacccccagtccgacctcaacgtctccctcctcatcg
tctccctcctcccgctcctcatcctcctcttcatcaccactatcctccccatcgcccaaa
cacaaaaccaaaaaggacaagcgctccctctgtgctttagggaagaggaaggagaccatg
gtgtaa
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