Oncorhynchus keta (chum salmon): 118366303
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Entry
118366303 CDS
T09424
Name
(RefSeq) transcription termination factor 1-like isoform X1
KO
K15225
transcription termination factor 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118366303
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase I system
Other transcription-related factors
Transcription termination factors
118366303
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_6
Pertactin
Motif
Other DBs
NCBI-GeneID:
118366303
NCBI-ProteinID:
XP_035604756
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All DBs
Position
33:complement(17731342..17738274)
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AA seq
786 aa
AA seq
DB search
MPKKICTFPAMSLWSPRFHFPHVSNQIEKIGYAAATMLGTPTSTKKGARENSMLFEMSRI
SPLLFEDTPELISSVAPDTVEGCKKNKKKKKKTKALSEQGSEELAIEHNQKDGHQLTVEK
RGEEPKHKEQTVTVVEKERKKLKKGKQEKQLNVVHSEMEVPDPEEQTGGKTKKKSKNLQT
QHVGAEGVTADEKNMNSRKNKRKNNDIEPERVIDSVLSKAEVDISAVTAPDEARKSKKKH
KNRQTELEEGGESCLTVSRTAEDPEIIELHTETVKSGERMVTEAAENVKEKRKQNKKKHR
ESELNDCPDKADLPGIKEQTERKLKSKRSKTDGGSTAVEGSGRKKKHRRESDKGMDSVHS
AADVLDLAVPNDNRTHDAGTNGETEEGAHSVIVETGTQHNNPCLKEETLSVDDWQALKDL
KDFIPNVESKSVGEIHKMIKYDLDRFKEFRRQGISLRSGRFNVQENERLRSNVYDFLSLT
GIQSGSELFHPQRFKEEEANIKTLKRQHRFHERIGEGIPRPWHQVYIRGRKMFDGSNYKG
RFTKEELHSLKKLQTLHGNKWAKISQLTGRSESSLEKRFAQMSANRGVWTEEELKRLMEA
VRKHLVGQAEPGSGPATVRKDHLYNNIPWTDVCQEVETRHWSQCRIKWLTVLKHKMACGQ
PVFSGGTQSLQGKVDLIKALNAMQIEDAADIDWEEIAYTIGDVTPRYIQTHYYRLKVASV
PMWQSMSFCEIIDFLNSRVLPNFEERLQVLRNSGEMVSRNDPQELFLLSEIFDNEDSDYY
SEVQNS
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgccgaagaagatatgtacatttccggctatgtcgctttggtcgccacggttccacttt
ccacacgtgtccaaccagatagagaaaataggatatgctgcagccaccatgctagggact
ccaacatccaccaaaaaaggggcacgtgagaattccatgttgtttgagatgtctcgaata
tcccctcttctatttgaagacactcctgaattaatctcatcagtggcacctgatacagtc
gagggatgcaaaaaaaacaaaaagaagaagaaaaagactaaagcactatctgaacaggga
tcagaagaactggcaattgagcataatcaaaaggatggtcaccagttgacagtagagaaa
aggggtgaagaacctaaacataaagagcaaacagtgaccgtggtggagaaggagaggaag
aaactcaaaaaaggaaagcaagagaagcagctaaatgttgttcacagtgaaatggaggta
ccagatcctgaggaacaaactggtgggaaaacaaagaaaaagtcaaagaatcttcaaaca
caacatgtgggagcggagggagtgactgctgatgagaagaatatgaatagccggaagaat
aagagaaaaaataatgacattgagccagaacgggtgatagacagtgtcctctcaaaggct
gaggtagacatttcagctgtaactgcaccagatgaggccagaaagagtaagaagaagcac
aagaacagacaaacagaacttgaggagggaggggaaagctgtctgacagtttcaagaaca
gcagaggatccagaaatcatagaactgcacactgaaacagtcaagagtggtgaacgtatg
gtaactgaggcagcggagaacgtaaaagagaagaggaaacaaaataagaaaaaacacaga
gagagtgaactgaacgattgtccagataaagcagaccttccaggtataaaagaacaaact
gaaagaaaattaaagtcaaagaggtcgaaaacagatggagggtctacagctgtggagggc
agcgggagaaagaaaaaacaccgcagagagtcagacaagggaatggacagtgtccactct
gcagcagatgttttggatttagctgttccaaatgacaacaggactcatgatgctggaaca
aacggtgagacagaggagggtgcccattcagtcattgttgagacagggacccaacacaac
aacccctgcctaaaggaagaaactctaagtgtggacgactggcaggctctgaaggatctc
aaagacttcattcccaatgttgagtcaaagtcggttggcgagatccataagatgataaag
tatgatcttgatcgattcaaggaattccgaagacaaggcatttccctgcgaagtggaaga
ttcaatgtgcaggagaacgaacgactcaggagtaacgtctacgacttcctgtctctcact
ggaattcagagtggctctgagctcttccatccacagcgcttcaaagaggaagaagcaaat
atcaagacattgaagaggcagcacagattccatgaaagaataggtgaaggaatacccagg
ccttggcatcaagtctatattcgtgggaggaaaatgtttgatggcagcaactacaagggc
aggttcaccaaagaagagcttcactctttgaaaaaactgcagacgttgcacggcaacaag
tgggcgaagatctcgcagttgactggccgaagcgaatcgtccctggagaaacgtttcgct
caaatgtctgcaaaccgaggcgtgtggactgaggaagaactgaaaagactaatggaagct
gtgcggaagcacctggtgggacaggcagagcctggcagtggaccagccaccgtcaggaaa
gaccatctgtacaacaacatcccctggacagatgtgtgccaggaggttgaaacgcgccac
tggtctcagtgtcgaataaaatggttgactgttttgaagcacaaaatggcatgtggacaa
ccagtattcagtggcggcacacaatccttacagggcaaagtggatttgatcaaagcgttg
aatgcaatgcagatagaagatgctgcagatatcgactgggaagaaattgcttacacaatt
ggggatgtcacgccgcgctacattcagacacactactacaggttaaaggtagccagcgtt
ccgatgtggcagagcatgtccttctgtgagatcatcgacttcctcaacagtagagttctc
cccaattttgaagagcgcctccaagttctgagaaactcaggagagatggtgtccagaaac
gatcctcaagagctctttctcctctctgagatctttgataatgaggacagtgactactac
agtgaggttcagaacagttaa
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