Oncorhynchus keta (chum salmon): 118366474
Help
Entry
118366474 CDS
T09424
Name
(RefSeq) probable ribonuclease ZC3H12C
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118366474
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
118366474
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
Regnase_1_C
UBA_6
Motif
Other DBs
NCBI-GeneID:
118366474
NCBI-ProteinID:
XP_035604998
LinkDB
All DBs
Position
34:20421211..20443654
Genome browser
AA seq
873 aa
AA seq
DB search
MGLKDHLEDETGRILNLGLDLDYLHVEGTDRQASLSATVGTHSGALEGDETEVGGTHSSV
SSSSISSSSSCSNSSEESAASDSEDERGVQHGSGSDAQTTHPHPCHPAGQGPAQSPHSRD
PKHSTNPFTEFRSKMEFALKLGYSEELVLLVVRKLGPDALINDILGELVKLGTKSEMDQA
GVSATSHSPSSSSLSSSSLDSCRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSC
HGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDTLITDQEILRHLEKDKILVFTPSRRVQ
GRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYTFVNDKFMPP
DDPLGRHGPSLENFLRKRPVIPEHRKQQCPYGKKCTYGHKCKFFHPERGSQPQRAVADEL
RAKNSSSSSTSSSKMVGEALMVKSHSMSSSSRVDGMPDPHQAPPKRQSDPSLCVPSYNDL
LEERLGRRTKAEARRGSSSSSSSSSSLLASAPGEPPSSHDFSLRDWGNTSSRAPGLSGLG
HSKSYSTCESPELNYHSLMGAYSSLSLVVPRSPDRLFPADLRTGSMVSDCSSEGSVSSDS
FSPDPLLDDSLKCHYPHPHHHHHHCPTCYPHHPNHPPPGLTQHPHGGSHHGFPLAQGSLE
DLPSSLHHFKAQLSYLPPHIQQPSVGSHSGCSGNYPPQPLSQTSSPHSHSHNSPLGHNLG
GSTWQDNNSLYKQSPVHPRRIYPGPGQEQRLAKWDPHYKHPPQACYEPFTFQSLPEGRKL
PWHSPWLRGTHSPHPQSLSSSHLPPLTHHSTAPQHQEPPALGRYQNVRENVFVNLCNIFP
PELVRVVMVRNPHVMDAQQLAAAILAEKSQAGY
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
atgggcctgaaggaccatctggaggatgaaacaggccgcatcctcaacctggggctggat
ttggactacctccacgtggaaggcaccgaccgccaggccagcttgagtgccacagttggc
acccactcaggagccttggagggggacgagacggaggtaggaggcacccatagcagtgtc
agtagtagcagcatcagcagtagtagtagttgtagtaactcctctgaagagagtgctgcg
tcggacagcgaggatgagcgaggggtccaacatggttctggttctgacgctcagaccacc
cacccacacccctgtcacccagctgggcagggcccggcacagagcccccattctagagac
ccaaaacactccaccaaccccttcacagagtttcgctccaagatggagtttgccctgaag
ctgggctactctgaggagctggttctgctggttgtgcggaagctagggcccgacgccctc
atcaatgacatactgggagaactggtcaaactgggcaccaagtcagaaatggatcaggct
ggggtgtcagccacctcccactcaccctcctcctcctccttatcctcctcctctctggac
tcctgcaggctggactgctcctcccagctgctgttggatgacaaggagaacatcaggcct
gtggtggtggatgggagtaatgtagccatgagccatgggaataaggaagtgttctcctgt
cacggcatccagctggctgttgattggttccttgagcgcggtcaccgtgacatcactgtg
tttgtgcccgcctggagaaaggaacagtccagaccggacacccttatcacagaccaggag
atattgcggcatctggagaaagacaagatccttgtgttcactccctctcgtcgggtccag
ggccgccgggtggtctgctacgacgaccgcttcatcgtcaagctggcctatgagtccgac
ggcataatcgtctctaacgacaactaccgggacctggccaatgagaagccagagtggaag
aagttcattgatgagcggttgctcatgtatacgttcgtcaatgacaagttcatgcctcct
gatgatcctctgggtcgccatggtcccagtctggagaacttcctgaggaagagaccagtt
atcccagaacacaggaagcagcaatgtccctatgggaagaagtgcacttacggccacaag
tgtaagttcttccaccctgagagaggcagtcagccccaacgcgctgtggccgacgagctg
cgtgccaagaactcctcttcatcctctacgtcttcctccaaaatggtgggtgaggctctg
atggtgaagagtcacagcatgtccagcagctccagggtagacgggatgccagacccccac
caagctcccccaaagagacagtcggaccccagcctttgcgtcccctcctacaacgacctc
ctggaagagcgtctgggcaggaggactaaagcagaggcccgcagagggagtagcagcagc
agtagcagcagcagcagcctcctggcttctgctcctggggaacctccttccagccacgac
ttttctcttcgggactgggggaacacctcctccagagctccagggctgtcggggcttggt
cactcaaagtcatactccacctgtgaatccccggagctaaactaccactccctgatgggg
gcttactccagcctaagcctggtagtgccgcggagccccgatcggctgttcccagctgat
ctacggacgggctcaatggtgtctgactgcagcagcgagggcagcgtgagctcagactcc
ttctcccctgatcccctgctggatgacagcctcaagtgccactatccccacccccatcac
caccaccatcactgccctacctgctacccacatcaccccaaccacccaccccctggtttg
acccagcacccccatggaggctcccaccatggcttccctctagctcagggcagcctggag
gatcttccctcctccctccaccacttcaaggcccagctctcctaccttcctccccatatt
cagcaaccgtctgtggggagccactctggctgttctgggaactaccctccccaacctcta
tcccagacctcaagcccccactcccactctcacaactctcctctggggcataacctgggg
ggctccacctggcaggacaacaacagcctctacaagcaatcccctgtccacccaaggagg
atctaccctgggccaggacaggagcagcgactggccaaatgggacccccactacaagcat
cccccccaggcctgctacgagcctttcactttccagtccctgcctgagggccgcaaacta
ccctggcactcgccctggctcagggggacacactctccccatcctcaatccctttcctcc
tcccatcttccacctcttacccaccactctacggccccccagcaccaggagccccctgca
ctgggcagataccagaacgtcagggagaatgtgtttgtcaacctgtgtaacatcttcccc
ccagagctggtaagggtggtgatggtgaggaacccccatgtgatggatgcccagcagctg
gctgcagccatcctggctgagaagtcccaggctggctactga
DBGET
integrated database retrieval system