KEGG   Oncorhynchus keta (chum salmon): 118366474
Entry
118366474         CDS       T09424                                 
Name
(RefSeq) probable ribonuclease ZC3H12C
  KO
K18668  ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118366474
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA degradation factors
   Other degradation factors
    RNases
     118366474
SSDB
Motif
Pfam: RNase_Zc3h12a Regnase_1_C UBA_6
Other DBs
NCBI-GeneID: 118366474
NCBI-ProteinID: XP_035604998
LinkDB
Position
34:20421211..20443654
AA seq 873 aa
MGLKDHLEDETGRILNLGLDLDYLHVEGTDRQASLSATVGTHSGALEGDETEVGGTHSSV
SSSSISSSSSCSNSSEESAASDSEDERGVQHGSGSDAQTTHPHPCHPAGQGPAQSPHSRD
PKHSTNPFTEFRSKMEFALKLGYSEELVLLVVRKLGPDALINDILGELVKLGTKSEMDQA
GVSATSHSPSSSSLSSSSLDSCRLDCSSQLLLDDKENIRPVVVDGSNVAMSHGNKEVFSC
HGIQLAVDWFLERGHRDITVFVPAWRKEQSRPDTLITDQEILRHLEKDKILVFTPSRRVQ
GRRVVCYDDRFIVKLAYESDGIIVSNDNYRDLANEKPEWKKFIDERLLMYTFVNDKFMPP
DDPLGRHGPSLENFLRKRPVIPEHRKQQCPYGKKCTYGHKCKFFHPERGSQPQRAVADEL
RAKNSSSSSTSSSKMVGEALMVKSHSMSSSSRVDGMPDPHQAPPKRQSDPSLCVPSYNDL
LEERLGRRTKAEARRGSSSSSSSSSSLLASAPGEPPSSHDFSLRDWGNTSSRAPGLSGLG
HSKSYSTCESPELNYHSLMGAYSSLSLVVPRSPDRLFPADLRTGSMVSDCSSEGSVSSDS
FSPDPLLDDSLKCHYPHPHHHHHHCPTCYPHHPNHPPPGLTQHPHGGSHHGFPLAQGSLE
DLPSSLHHFKAQLSYLPPHIQQPSVGSHSGCSGNYPPQPLSQTSSPHSHSHNSPLGHNLG
GSTWQDNNSLYKQSPVHPRRIYPGPGQEQRLAKWDPHYKHPPQACYEPFTFQSLPEGRKL
PWHSPWLRGTHSPHPQSLSSSHLPPLTHHSTAPQHQEPPALGRYQNVRENVFVNLCNIFP
PELVRVVMVRNPHVMDAQQLAAAILAEKSQAGY
NT seq 2622 nt   +upstreamnt  +downstreamnt
atgggcctgaaggaccatctggaggatgaaacaggccgcatcctcaacctggggctggat
ttggactacctccacgtggaaggcaccgaccgccaggccagcttgagtgccacagttggc
acccactcaggagccttggagggggacgagacggaggtaggaggcacccatagcagtgtc
agtagtagcagcatcagcagtagtagtagttgtagtaactcctctgaagagagtgctgcg
tcggacagcgaggatgagcgaggggtccaacatggttctggttctgacgctcagaccacc
cacccacacccctgtcacccagctgggcagggcccggcacagagcccccattctagagac
ccaaaacactccaccaaccccttcacagagtttcgctccaagatggagtttgccctgaag
ctgggctactctgaggagctggttctgctggttgtgcggaagctagggcccgacgccctc
atcaatgacatactgggagaactggtcaaactgggcaccaagtcagaaatggatcaggct
ggggtgtcagccacctcccactcaccctcctcctcctccttatcctcctcctctctggac
tcctgcaggctggactgctcctcccagctgctgttggatgacaaggagaacatcaggcct
gtggtggtggatgggagtaatgtagccatgagccatgggaataaggaagtgttctcctgt
cacggcatccagctggctgttgattggttccttgagcgcggtcaccgtgacatcactgtg
tttgtgcccgcctggagaaaggaacagtccagaccggacacccttatcacagaccaggag
atattgcggcatctggagaaagacaagatccttgtgttcactccctctcgtcgggtccag
ggccgccgggtggtctgctacgacgaccgcttcatcgtcaagctggcctatgagtccgac
ggcataatcgtctctaacgacaactaccgggacctggccaatgagaagccagagtggaag
aagttcattgatgagcggttgctcatgtatacgttcgtcaatgacaagttcatgcctcct
gatgatcctctgggtcgccatggtcccagtctggagaacttcctgaggaagagaccagtt
atcccagaacacaggaagcagcaatgtccctatgggaagaagtgcacttacggccacaag
tgtaagttcttccaccctgagagaggcagtcagccccaacgcgctgtggccgacgagctg
cgtgccaagaactcctcttcatcctctacgtcttcctccaaaatggtgggtgaggctctg
atggtgaagagtcacagcatgtccagcagctccagggtagacgggatgccagacccccac
caagctcccccaaagagacagtcggaccccagcctttgcgtcccctcctacaacgacctc
ctggaagagcgtctgggcaggaggactaaagcagaggcccgcagagggagtagcagcagc
agtagcagcagcagcagcctcctggcttctgctcctggggaacctccttccagccacgac
ttttctcttcgggactgggggaacacctcctccagagctccagggctgtcggggcttggt
cactcaaagtcatactccacctgtgaatccccggagctaaactaccactccctgatgggg
gcttactccagcctaagcctggtagtgccgcggagccccgatcggctgttcccagctgat
ctacggacgggctcaatggtgtctgactgcagcagcgagggcagcgtgagctcagactcc
ttctcccctgatcccctgctggatgacagcctcaagtgccactatccccacccccatcac
caccaccatcactgccctacctgctacccacatcaccccaaccacccaccccctggtttg
acccagcacccccatggaggctcccaccatggcttccctctagctcagggcagcctggag
gatcttccctcctccctccaccacttcaaggcccagctctcctaccttcctccccatatt
cagcaaccgtctgtggggagccactctggctgttctgggaactaccctccccaacctcta
tcccagacctcaagcccccactcccactctcacaactctcctctggggcataacctgggg
ggctccacctggcaggacaacaacagcctctacaagcaatcccctgtccacccaaggagg
atctaccctgggccaggacaggagcagcgactggccaaatgggacccccactacaagcat
cccccccaggcctgctacgagcctttcactttccagtccctgcctgagggccgcaaacta
ccctggcactcgccctggctcagggggacacactctccccatcctcaatccctttcctcc
tcccatcttccacctcttacccaccactctacggccccccagcaccaggagccccctgca
ctgggcagataccagaacgtcagggagaatgtgtttgtcaacctgtgtaacatcttcccc
ccagagctggtaagggtggtgatggtgaggaacccccatgtgatggatgcccagcagctg
gctgcagccatcctggctgagaagtcccaggctggctactga

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