Oncorhynchus keta (chum salmon): 118366702
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Entry
118366702 CDS
T09424
Name
(RefSeq) protocadherin-17-like
KO
K16499
protocadherin delta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
oke04515
]
118366702
Cell adhesion molecules [BR:
oke04515
]
Cadherins
Protocadherins
118366702
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
PRIMA1
Motif
Other DBs
NCBI-GeneID:
118366702
NCBI-ProteinID:
XP_035605189
EnsemblRapid:
ENSOKEG00005011853
LinkDB
All DBs
Position
34:complement(7753594..7776822)
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AA seq
1105 aa
AA seq
DB search
MRLPVICFLLFWAKARTLKNLNYSVPEEQGPGTVIGNIAKDAGFGPVEKGTKSNFRVLEN
SAPHLIDVDSESGLLFTKQRIDRETLCKRNPKCQLSMEVFANDKEICMIKIDVVDINDNS
PSFPSDHINIDISENAAAGTRFPLTIAHDSDSGQNGIKTYQVTRDDYNTFSLDLKLRGDG
TIYPELVVQRPLDREDQSHHTLLLTAIDGGEYPRSGSMQINVRVTDSNDNSPVFDKPSYM
LELPENSPPGRMLIDVNATDQDEGSNGQVVYSFSGYASDRVQELFSIDPKTGVIKIQGEI
DYEDNPTIEFDVQAMDLGPNPIPGHCKISVKVLDKNDNWPVISFVSVRQGAISEAAPPES
VIALVRVTDKDSGRNGQLQCRVLGNVPFRLQENNDNFYTLLTDRPLDRELKDEYNVTIVA
RDNGIPSLNYTKSFTVKILDENDNAPRFTKTVYVLQVPENNIPGEYLGSVLAHDPDIGQN
GTVSYSILPSHIGDVSVHTYVSVNPTNGAIYASRSFNYEQTKFFEFKVQAKDAGSPHMEG
SATVRVSVLDVNDNLPVIVLPLLINDTVEIMVPRNVGLGYIVTTVRAVDQDHGESGRLTY
EIWEGNEEHLFEMDPVAGEVRTAHAVWEDVAPAVELVVKVTDHGKPPLSAVAKLIIKANT
GAMAAGESSASGEQQHWDMSLPLIITLCIISLMLLAVMTTIAVKSKHQDKEAGNYNCRMA
EYSNPPVGNGKKKRINKSDIMLVQSEVEERDSVSRMSVVSSPSLITSPICFDYQATSPLP
LTLPRSEVMYLKTTFNSLTVPRAGCHSSFAGLTTETPMDRMSVIQTDNFPSEPNNVANRQ
PFAQSSSTFKDAERASLRDSGHGDSDQADSDLDTNKGCACNTSARGALKMKATAVNGQPL
DQGQGRSVHCTDECRALGHSDRCWMPKLRVGGQADSGDNRTDLFIPVGMEATAETEIYGS
LNRSAARKTLSTFGKEQRDSTILVANIKPYFKSQSARSPLLQECSSGSSSPTKGNTPLDS
HTKGPREEVGRDGEGGSDSSAYGPPDGQCSPPHTELEEPSYMACGLTPKSLSNSLIHSSE
IRSGIISQECVGMECVSPNQRDSGD
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcttcctgtcatatgtttccttctcttctgggctaaagcccggacactgaaaaat
ctaaattattctgttccggaggagcagggacctggaactgttatcggaaacattgctaag
gatgccggatttggaccggtggagaaaggaaccaaatcgaactttcgagttctggagaat
tctgctccacatctcattgatgtggattcggagagtgggctgctttttaccaaacagcgg
attgacagggagacattgtgcaaacgcaaccctaagtgtcagctctctatggaagtgttt
gccaacgacaaggaaatatgcatgatcaagattgatgtagtggatataaacgacaactcc
cccagtttcccttcagatcacatcaatattgatatttcagagaacgcagctgctgggaca
cggttccctttaacaattgcacacgactcagattctggacaaaacggaataaagacttat
caggtcaccagagatgattacaatacattttctttggacttgaaattgagaggtgatgga
accatatatcctgaattggtggttcagcgccctctagatagggaggatcagtctcatcac
accctccttttgacagccattgatggaggggagtatccgagatcagggtccatgcaaatc
aacgtgagagttactgattcaaacgataatagcccagtatttgacaaacccagctacatg
ctggagcttcctgaaaactcaccgcctgggagaatgctgatagatgtgaatgcaactgat
caagatgagggcagcaatggacaggtagtctattctttcagtggatatgcatccgataga
gtccaagagttgttttctattgatcccaaaacaggtgtcattaagattcagggagaaatt
gactatgaggataatccaaccattgaatttgacgtgcaggccatggacctggggcctaac
cccatacctggccattgtaagatttcagtcaaggtgcttgacaagaatgataactggccc
gttataagttttgtctccgtccgccagggagcgatcagtgaggcagcgcctccagaatct
gtcatcgccctggtgagagtcactgataaggattctgggaggaatggccagctccagtgc
agggtgcttggcaatgtaccattcaggctgcaggaaaacaatgataatttttacactttg
ctcacagacagacctctagacagggaactgaaagacgaatataatgtgaccatagtggcc
agagacaacggaataccctcgttgaattacaccaaatcatttacagtgaaaatcttagat
gagaatgataatgcaccgcgtttcaccaagacagtgtatgtgctccaggtgcctgagaac
aacatcccaggggagtacttaggctcagttctggctcatgatccagatataggtcagaat
ggaactgtgtcttactccattttaccgtcgcacatcggagacgtgtcagttcacacctac
gtgtctgtgaaccctaccaacggagccatttacgcctcaaggtctttcaactacgaacaa
actaagttctttgagttcaaagttcaagctaaagacgcaggttctcctcatatggagggc
agtgccacagtcagagtcagtgtgcttgacgtcaatgacaatctaccagttattgtatta
cccctcctgataaatgacactgtggaaatcatggtccctagaaatgtaggtctggggtac
atagtgaccacggtgagagcggtcgatcaggaccacggggagagcggtcgtctgacctac
gagatctgggagggtaatgaggagcacctgtttgagatggaccctgtggccggcgaggtg
aggactgcccatgctgtgtgggaggacgtggccccagctgtggagctggtagtgaaggta
accgaccacggcaagcccccactgtctgccgtggctaagctgatcattaaggccaacaca
ggagccatggcagcaggggagtccagcgccagcggggagcagcagcactgggacatgtcc
ctgcccctcataatcaccctctgcatcatctccctcatgctcctggctgtcatgactacc
atcgccgttaagtccaagcatcaagataaggaggcagggaattataactgccgtatggcc
gagtactccaaccccccggttggaaacggcaagaagaagaggatcaacaagagcgacatc
atgctggtgcagagcgaggtggaggagagggactctgtgagcaggatgagcgtggtgagc
agcccgtctctcatcacctcacctatctgtttcgactaccaggcgaccagccccctgcct
ctcacgctgcccaggtcagaggtcatgtatctgaaaaccactttcaacagcctgacggta
cctcgggctggctgtcactcaagctttgcggggcttaccacagagactcctatggataga
atgtcagtgatacagacggataattttccttcggagccgaataacgtggccaacaggcaa
ccatttgctcaaagcagctcaacttttaaggatgcagagcgagcgagcctccgagacagt
ggccatggtgatagtgaccaggctgatagtgacctggatactaataaaggctgcgcctgc
aacacatctgccaggggggccctcaagatgaaagccacagcagttaatggccagcctctt
gaccagggacaaggcagatctgttcactgcacagatgaatgtcgtgcgctgggccattct
gacagatgctggatgccaaagctacgtgtaggaggccaagcagacagcggcgataatcgc
accgaccttttcatcccagtgggaatggaggccacggctgagacagagatttatggcagc
ctcaaccgcagcgcagccagaaaaaccctcagcacgttcggcaaggagcagcgggacagc
accatcctagtggccaacatcaaaccctacttcaagtctcagagtgcccgcagtcccctg
ctgcaggagtgctcttctgggtccagcagccccaccaaagggaacacacccctggactcc
cacaccaaagggcctagggaggaggtggggagggacggggaggggggctcagacagcagt
gcctatggacccccagacggccaatgttcaccgccccatacggaattggaggagccgtca
tatatggcttgcggcctcacgcccaagtccctgtcaaacagccttatccacagctctgag
atcagatctgggatcatcagccaggaatgtgtggggatggagtgtgtcagtccaaaccag
cgggactctggggactga
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integrated database retrieval system