Oncorhynchus keta (chum salmon): 118366705
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Entry
118366705 CDS
T09424
Name
(RefSeq) E3 ubiquitin-protein ligase Midline-1-like isoform X1
KO
K08285
midline 1 [EC:
2.3.2.27
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
118366705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118366705
Enzymes [BR:
oke01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
118366705
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118366705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COS
SPRY
zf-B_box
ANCHR-like_BBOX
RING_XB3-XBAT31
zf-RING_UBOX
fn3
PRY
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-C3HC4_3
FN3_DSCAM-DSCAML_C
zf-RING_2
TRIM_CC
zf-RING_5
Pur_ac_phosph_N
Spectrin_Anc-1_2
Motif
Other DBs
NCBI-GeneID:
118366705
NCBI-ProteinID:
XP_052348837
LinkDB
All DBs
Position
34:complement(8010737..8044811)
Genome browser
AA seq
691 aa
AA seq
DB search
METLESELTCPICLELFEDPLLLPCAHSLCFNCAHRILISHCSPNEPVQSISAFQCPTCR
YAITLNQRGLEGLKRNVTLQNIIDRFQKASVSGPNSPSETRRERVAPNGTAMTSPSERVQ
CQFCEQDPPQDAIKTCVTCEVSYCDECLKATHPNKKPFTSHRLIEPMPDCHIRGLMCLEH
EDEKVNMYCVTDEQLICALCKLVGRHRDHQVAALSDRYEKLKRTPDCYLSERSEQEEADQ
EISTQTLDSNLSNLIKRNNELETLMGKLIQICQHVEGNASRQENKLLEECDLLMDVVQQR
RQIIATKINEGKAIRLRKLAQQIATCKQIIERSSSLITQADHTLREGDHARFLQTAKSIC
ERVSMATASSQILIPEINLNDTFDTFALDFTREKKMLEGLDYLTAPNPPIIREELCTASY
DTITAHWTSDDEFCVVSYELQYAIFTGQANVVSLCNSADSWMIVPNIKQNHYTVHGLQCG
TKYIFMVKAINQAGSRSSVPGKLKTNSQPFKLDPKSAHKKLKVSHDNLTVERDETSSKKS
HNQDRFTSQGSYGVTGNVYIDSGRHYWEALIGGSTWFAVGVAYKSAPKHEWIGKNSASWV
LSRCNNSWVVRHNSKEMPIEPSPHLRRVGVLLDYDAGSLAFYDGAGSQHLYTFDITFAQP
VCPVFNVWNKCLTVLTGLPIPDHLEGTDCQD
NT seq
2076 nt
NT seq
+upstream
nt +downstream
nt
atggaaacactggagtcggagttgacctgcccaatctgtctggagctcttcgaggacccc
ttgctcttgccctgcgctcacagcctgtgtttcaactgtgcccaccgcatcctgatctcc
cactgcagccccaacgagcctgtgcagtccatcagcgccttccagtgcccaacctgtcgc
tatgccatcaccctcaaccagaggggcctagagggactgaagcgtaacgtcactttgcag
aacatcatcgaccgcttccagaaggcttccgtgagcgggcccaactcccccagcgagact
cgccgtgagcgggtcgccccgaacggcacggccatgacctcccccagcgagagggtgcag
tgtcagttctgtgagcaagaccctccccaggatgccatcaagacctgtgtcacctgtgag
gtgtcctactgcgacgaatgcttgaaggccacccaccccaataagaagcccttcaccagc
caccgtctgatcgagcccatgccggactgccacatcaggggactcatgtgtctggagcac
gaggacgagaaggtgaacatgtactgtgtcacagatgaacagttgatctgtgccttgtgc
aaactggtcggtcggcatcgggaccaccaagttgccgccctcagcgaccgctatgagaaa
ctcaagagaactccagactgctatctcagtgagaggagcgaacaagaggaagcagaccag
gagatatctacgcaaaccttggactccaacctcagcaatctgattaagaggaacaacgag
ttggaaactctgatgggcaagttgatccagatctgccaacatgtggaggggaatgcatcc
agacaagagaacaagctcctggaagagtgtgacctcctgatggacgtggtacagcagaga
agacagatcatagccaccaagataaacgagggcaaggctatccgtctgcgaaagctagcc
cagcagatcgccacctgcaagcagatcatcgagagatcgtcatccctcatcactcaggca
gatcacaccctgagggagggagaccacgcccgcttcctgcagacagccaaaagcatctgc
gagagagtgtccatggcgacagcatcctctcagatcctgataccagagatcaacctgaat
gacacctttgatacgtttgcgttggactttacaagggaaaagaaaatgctggaaggcttg
gattacctcacagcaccaaatcccccaataatccgggaggaattatgtacggcatcgtac
gacaccatcactgctcactggacatcagatgacgagttctgtgtggtctcctatgagctg
cagtatgccatcttcactggacaagccaatgtcgtcagtttgtgtaactcagctgacagt
tggatgattgtgcccaacatcaagcagaaccactacacagtgcatggactccagtgtggc
accaagtacatctttatggtcaaagctatcaaccaggcagggagtcgcagcagtgtacct
gggaagctcaagaccaacagtcagccgttcaagttggacccaaagtctgctcacaagaag
ctgaaggtctcccacgacaacctgacggtggagcgagacgagacgtcgtccaagaagagc
cacaatcaggaccgcttcaccagccagggcagctacggcgtcactgggaatgtgtacatc
gacagcgggcgccactactgggaggccttgataggagggagcacatggtttgctgtgggc
gttgcttacaagtcagcaccgaaacacgagtggatcggcaagaactcggcctcgtgggta
ttatctcgatgcaacaactcctgggtagtacgtcacaacagcaaggagatgcccatcgag
ccgtccccccacctgcgtcgcgtgggggtgttgttggactacgacgccggttccctggcc
ttctacgatggcgccggctcacagcacctgtacacgttcgacatcaccttcgctcagcca
gtgtgtcccgtgttcaacgtgtggaacaagtgtctgactgttctcacggggctgcccatc
ccagaccacctcgaggggacagactgccaggattaa
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