Oncorhynchus keta (chum salmon): 118366740
Help
Entry
118366740 CDS
T09424
Name
(RefSeq) POU domain, class 2, transcription factor 1 isoform X5
KO
K09364
POU domain transcription factor, class 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
118366740
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118366740
03021 Transcription machinery [BR:
oke03021
]
118366740
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain POU
118366740
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase III system
Other transcription-related factors
Octamer transcription factors
118366740
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
POU2F1_C
Pou
Homeodomain
Homeobox_KN
T6_Ig_like
Motif
Other DBs
NCBI-GeneID:
118366740
NCBI-ProteinID:
XP_035605267
LinkDB
All DBs
Position
34:12242030..12282258
Genome browser
AA seq
693 aa
AA seq
DB search
MADGGAASQDESSGPDSRMSNASERSKCGMESQSGDGNTEIQTNGLDFQRQTLQTTSAIT
NAHTQALLQQLTLSPAQQQLLLQQAQAQLLAAAMQQQSASQQSSTTGASISASAATPITQ
LPLSQPIQITSLQQLQQQNLTMPQFVLVQPGHHIATQLQPGQFIISQSPQGQQSLLQGQS
LLTQLPQSQANLLQTHPSITLSTQPATPTRTIAATPIQPLAHSQTSPPKRLATPSLEEPS
DLEELEQFAKTFKQRRIKLGFTQGDVGLAMGKLYGNDFSQTTISRFEALNLSFKNMCKLK
PLLEKWLNDADNLSSDQALSSPSALGSPGLGMEGLNRRRKKRTSIETNIRLALEKRFLEQ
NQKPTSEEITMIADQLNMEKEVIRVWFCNRRQKEKRINPPSGGYSNTGTGSSPIKTIFTP
TIPLVASTASLVTSNTPTTLTVNPVMPLNSTSVSGLTFTGTTIGATTNTASVISTAPMVT
AVTSSPSLSPSPTAPQATAAETGGTQEHTVVTQAPSSLATTLGTGQVMVAGLGLSAALQG
AAQLPTSASFAAMAGLNQGLMASSQFTPGGALLSLAPGGLGGALNPAMLSNSTLATIQGL
WSALASGGALPITSLDGSGNLLFANTSAGSTPNLMQPLFLNPQNLSLLTTNPVNLVSAGA
AGGGALQVSADHQVTTATVPVPASTITTASRAQ
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggcggacggaggagcagcgagtcaagatgagagttcaggaccagattctagaatgagt
aatgcgtcagaaaggagtaaatgtggaatggagagtcagagtggggacggcaacacagaa
atccaaacgaatggactggactttcagaggcagacgcttcagaccacaagcgcaatcacc
aatgctcacacacaggctctcctccaacagttgaccctgtctccagcgcagcagcagttg
ttgttgcaacaggcccaggcccagctcctagcagcagccatgcagcagcagtcagccagc
cagcagagcagcactacgggggccagcatctctgcctctgcagccacccctatcacacaa
ctgcccctgtcccagcccatccagatcacctctttacaacagctgcagcagcagaacctg
accatgccccagtttgtcctggttcagcctggccaccacatcgctacccagctgcagcct
ggccagttcatcatctcacagtcaccacagggccagcagagtctcctgcaaggccagagt
cttctaactcaactacctcaaagccaagccaacctcctgcagactcatcccagcatcacg
ctctccacacagccagcgactccaacccgcacgatagcagccacgcccatccagcctctg
gcccacagccagacctcgccccctaaacgcctggccacgcccagtctggaggagcccagt
gacctggaggagctggaacagtttgccaagaccttcaaacagagacgcatcaaactgggc
ttcacacagggagatgttggcctggctatgggcaagctgtacggtaacgacttcagccag
accaccatctcccgcttcgaggccttgaacctgagctttaagaacatgtgcaagctgaag
ccactgctggagaagtggctcaacgatgcagacaatctgtcgtctgaccaggccctgtcc
agccccagcgccctgggctcccctggcctgggtatggaggggctgaaccgccgacgcaag
aagaggaccagcatcgagaccaatatccgtttggcattagaaaagagatttctggaacag
aaccaaaaacctacctctgaggagatcaccatgatcgccgaccagctcaacatggagaag
gaggtgatccgggtgtggttctgtaaccgccggcagaaagagaagaggatcaacccccct
agcggtggatatagcaacaccgggacaggaagcagccccatcaaaaccatcttcacccct
acgatccccctggtggccagtacggccagccttgtgaccagtaacacaccgaccacactg
actgtaaacccagtgatgcctctcaacagcaccagcgtgtctggcctgaccttcacaggc
acgaccataggagcgaccacaaacacggcatctgtcatctccacggcacccatggttact
gcggtgaccagctccccatcgctaagcccctcccccacggccccccaggctacggcggcg
gagaccggcggaacccaggagcacacggtggtcacgcaggcaccgtcgtccctagcgacc
actctggggacgggtcaggtgatggtggctggactaggcctgtcggccgccctgcaaggc
gccgcccagttacccaccagcgctagtttcgccgccatggccgggcttaaccaaggactt
atggcgtcgtcgcagttcactcctgggggggccttgctgagcttggctccaggggggctg
ggaggggctctgaaccccgccatgttgagcaacagcaccctggccaccatccaaggtctg
tggagcgctctggcatcaggcggtgctctccccatcacctcgctggatgggagcggtaac
ctgctgttcgccaacacctccgccggcagcacccccaacctgatgcaacccctcttcctg
aacccccagaacctgtccctgctcaccaccaaccctgtcaacctggtgtcagccggagct
gctgggggaggggccctgcaggtctcagctgaccaccaggtcaccacggcgactgtacca
gttcccgcctccaccatcaccactgcctccagggcccagtga
DBGET
integrated database retrieval system
