Oncorhynchus keta (chum salmon): 118366770
Help
Entry
118366770 CDS
T09424
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
oke
Oncorhynchus keta (chum salmon)
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
118366770
NCBI-ProteinID:
XP_035605318
LinkDB
All DBs
Position
34:15402405..15432624
Genome browser
AA seq
750 aa
AA seq
DB search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NT seq
2253 nt
NT seq
+upstream
nt +downstream
nt
atggttgtacctcccttctccgcccccctccctctcctagtggctctgcttcagcttgca
gtactacctcttgtccacacgggggcgtactacagacacaagcagcacccgcagcagcat
cagcccacgccacacctgtcccacatgggcataggaggtaaggagcagcaccctcagcag
cattggccgggaaaagagatgccccacatgcagtacccccagtacagaaaagagatccca
cagatgtccatgcacatgggcaagacgaacccccacaagggtggagtagtcaacagtgga
caggataaaggtcaaaccatccccagtggggcagtgggaggtctccctgggggtctgcca
ggagagcagggcccagctgggcctcccggacctgagggtccctctgggcctccaggacct
cccggggaaggaaagccaggaggggaaggaaaaccaggccacgctggtcccccaggattc
cctggagtaggaaaaccaggactcccaggaattccaggcaagccaggcagcatgggaggg
ccaggagtacctggagaattgggccgcagcgggagggagggtccgatggggcagccaggg
cctcaggggtcccctggtccttcaggtcttccagggataggaaaattaggggctgggggg
ttgccaggacaaccaggatccagaggagagccaggacacaaaggcctgccgggactacca
ggattaccaggacccaagggtgacaaggggattggacagccaggacagccaggccacaaa
ggactagcaggacctcctggacctccaggacagggagggatgcctggtgtgggcaagcct
ggaatgaatggcatgtcagggccaccaggaggaccagggaaaccaggtctccctggagag
caggggctggctggaccagcaggagagggcggagagcccggtccaccagggctgccaggt
cagggaaaacctggccagaatggtctgctgggacaaccaggaatgcctggtgggaaaggg
cacccaggccctccaggttttccagggaagcctggattgcctggattcggaaaaccagga
ttcccaggacccaaaggagataaggggatgggtgggatgcctggaggcccaggaccaaag
ggagacaagggccatggaggactgcctggtatgctaggacagcctggatcaattggacca
gctggtccccttggccctatgggaccccctggaggtctgggtcaaccagggccaaaagga
gaggctggagaaggaggtcataaggggttccctggtgggcaaggggagcctggtcctact
ggaatgactggtcagaatggcttccctggagagggaggagagcctgggccaaggggtccc
actgggcctgtaggaccccaaggggaaggcggacacaaagggttaccaggtggccctggc
attccagggctacctgggccaaagggagagggaggacttccaggtgagaagggtccccaa
ggtcctaagggcattccaggtctgggaggtgcaggtgggccgatcggacctcctggtgct
cctgggtctaaaggtgacagcggacctcctggtcttcccggcgttgatggtaagggaaac
gcaggtgtccctggtcctcttggacctccaggtaaagaaggtcctggaggaccaccggga
agcccaggccagccaggtccacctggtcccccagggcctcccggacccactgacatggga
gcagtcctccctgagatgggttttcctcctgggctggacggagtcaagactgccagttat
ggcaagaagggaaaatatggaggaaacggaggagaagtgatgggccccaacggcctggag
atgcccgcgttcacggctctggtgaccacgcccttcccacctgtgggcacggctgtggtg
tttgacaaaatcctgtacaacggccgtcagaactacaacccccagacaggcgtgttcacc
tgcgacatgcccgggatctactactttgcctaccacatcagctgcaaaggggccaacgtg
tgggtggcgctgatgaggaacgatgagcctgtgatgtacacatatgatgagtataaaaag
ggcttcctggatcaggcatcggggagcgcagtgttgcctctacagcccggggacactgtg
tacctccagctaccctcggaccaggccgcaggactatacgctggccaatatgtccactcc
tccttctctgggtacttgttgtaccccatgtaa
DBGET
integrated database retrieval system