Oncorhynchus keta (chum salmon): 118366812
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Entry
118366812 CDS
T09424
Name
(RefSeq) tripartite motif-containing protein 45-like
KO
K12021
tripartite motif-containing protein 45
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
oke04121
]
118366812
Ubiquitin system [BR:
oke04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
118366812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filamin
zf-B_box
ANCHR-like_BBOX
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-RING_5
Apolipoprotein
Snapin_Pallidin
Motif
Other DBs
NCBI-GeneID:
118366812
NCBI-ProteinID:
XP_035605419
LinkDB
All DBs
Position
34:20758590..20769925
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AA seq
600 aa
AA seq
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MSHCDQILEKDVDSSPTATTNSSSKNGDNGDAVINARAVCRVCKCLYREPKIMQCLHTFC
ADCVRQLEPFSVSSGVHNGKAVPLEGEPPSAVTVLCPECDSEVDIPLSGVDGLTTDHLAL
DEVFLETMMSKNSVVCDLCSDGDAEKRCEVCSVNLCEFCIQAHRRQKRTSSHTVQCLEDL
KTQGCLSRPVLCSLHPAQELRLFCEPCDLPVCLECAATFHRDHRCLPTRDVIDRHGGRIR
DLVTGRLRPRLDQLEESLRKVDLSQETLQTRVDAAVDEVRSFARGYASAVESHCLLLLRR
LEELGLQRRSHLHLQRAQLQQALSDTRGGVEFAERLLTCGSDAEILSAKDVTLRRLAALM
ETGYNPPPEAVCPDEGSSICFLPQESAGEVAGYPMVGVIHTKTLELSRCTIEGEGLQRGR
EGQRGEFTLVCRDFAGEQMGRGGEAVLVSMVHKEKKDCRVEAAVVDNNDGSYSVSYTPME
PGPYSVWVCVKALHVKGSPFVLNVRRQVRWHRGTFHCCSFCSSGGSKEARCGCMGTMPGG
FQGCGHGHKGHPGKPHWSCCGSTVEASECLPQSVITAVGGTITAVGGTGSPRGHLRTVEL
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgtcacactgtgaccaaattttggaaaaagatgtggattcctcgccaaccgcgaccaca
aactcgagctctaaaaacggagataacggggacgccgttatcaatgcgagggcagtgtgc
cgcgtttgtaaatgtttatatcgcgagcctaaaattatgcagtgtttacacaccttctgc
gcggactgcgttcgtcaactggaaccattttcggtgtcttcgggagtacacaatggtaaa
gcggtccctctggaaggcgagccgccctctgccgtcaccgttctctgtccggagtgtgac
tccgaggtggacatcccgttgtccggagtggacgggctgaccactgaccacttggccctg
gacgaagtgtttctggagacgatgatgagcaagaactctgtggtatgcgacctgtgcagc
gacggggacgcagagaagcgttgtgaggtgtgcagtgtcaacctgtgtgagttttgtatt
caagcacacaggagacagaagaggacgtcgtctcacaccgtccagtgtctggaggacctg
aagacccagggttgtctctctcggcctgtcctgtgctccctccaccctgcccaggagctg
cgtctcttctgtgagccctgtgacctacctgtctgcctggagtgtgccgccaccttccac
cgcgaccaccgctgcctccccacacgtgatgtcatcgatcgccatgggggccgtatccgg
gatttggttaccgggcgcctgcggccacggctggaccagctggaggagtcactgcggaag
gtggacctatcccaggagaccttgcagaccagggtggatgcggcggtggacgaggtgcgt
tccttcgcacgaggctatgctagcgctgtggagtcgcactgcctgttgctgctacggcgc
ttagaggagctgggtctgcagcgcaggagtcatctccatctgcagagggcgcagctgcag
caggccctgtcggacacccgcgggggggtggagtttgcagagcggctgctgacgtgcggg
tcggacgcagaaatcctcagtgctaaggacgtgaccctccgcaggctggctgccctgatg
gagactggttacaacccccccccagaagccgtctgccccgatgaagggagcagtatttgc
ttcctgccacaggagagtgcaggcgaggtggcggggtacccgatggtgggggtgatccac
accaagaccctggagctcagcaggtgcaccattgaaggggaaggtctgcagcgtggcagg
gaaggccaaagaggggagttcaccctggtgtgtagagactttgctggggagcagatgggt
cgtggaggggaagctgtcctggtcagtatggtccacaaggagaagaaagactgcagagtg
gaggcggcggtggtggataacaatgatggctcctattctgtctcctacacccccatggag
ccagggccctactctgtgtgggtgtgtgtcaaggccctacacgttaagggttcccccttt
gtcctgaatgtgaggagacaggtccggtggcaccgtggaacattccactgctgttccttc
tgctccagtgggggttctaaagaggcccgttgtggctgcatgggaaccatgccaggaggg
ttccagggctgtggtcacggccataagggtcaccccggtaagccccactggtcgtgctgt
ggaagtacggtggaggcctcagagtgcctgccacagagtgtcataacggcagtgggtgga
acaataacagcagtgggggggacaggctcgcctcggggccacctcaggacagtggagctc
tga
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