Oncorhynchus keta (chum salmon): 118366852
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Entry
118366852 CDS
T09424
Name
(RefSeq) TBC1 domain family member 8-like isoform X1
KO
K19951
TBC1 domain family member 8/9
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118366852
Membrane trafficking [BR:
oke04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
118366852
Endosome - Golgi transport
Rab GTPases and associated proteins
118366852
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RabGAP-TBC
GRAM
RabGap-TBC_2
PH-GRAM_MTMR6-like
EF-hand_1
Ty3_capsid
Motif
Other DBs
NCBI-GeneID:
118366852
NCBI-ProteinID:
XP_035605504
LinkDB
All DBs
Position
34:complement(24921778..24948790)
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AA seq
1150 aa
AA seq
DB search
MWLNPEEVLLKNALKLWVTEKSNEFFLLQRRRGHGDTGGKFTGLLVGALDSVLDSNARVT
PFRILLQMPGSQVSWTIACGAAVGEMNRHWDWLVQNLLHSLSVFENKEDVASFVKGKVKG
LIAEEVRGRQAAQEEEPEKFREALLKFELCFGLPSSEKLVTTYSCCCWKGRVPRQGWLYL
SINHMAFYSFLLGKEVKFVIPWAEVTRLERVSTGLMTDMVRVMTRRCQLDFSMFLSLDEA
FGVIGQLADIALRRLLDSEGLELDRVLQQSSNITKRVLEEQALRTYVLALFRLPRGERLQ
EVALCSVWTPHARCHTTGTLFTTDSYLCFASREEGHCSLLIPLSEVISIEKAESTSLLPN
PVIVSVRSKKAFQLIELQDRDSLVDGLTSRLRALQWKHSMFRSKKSLTSSSPYYTFCYDT
MYCDGEDIEERALRQTVNTEALMACYHHSQPDPNNSTATMEQVKERLWEDHFPEYGRGVH
MFRTEKIQKLVAMGIPESLRGELWMTFSDASSELASHPGYYSGLVTESMGQSSLATEEIE
RDLHRSLPDHPAFQNVKGIAALRRVLTAYAHRNPKIGYCQSMNILASVLLLYTKEEEAFS
LLVAVCERMLPDYFNRRVIGAQVDQSVFEELIRDRLPELAEHIPDLSPLSSISLSWFLTL
FLSVLPFRSAVCVVDCFFFHGIKAIFQLGLAVLDANATALCASADDSQALMILTGFLDQV
KYDEDPSPPTPTPHPLSSQSGEEEGRPPVKQHTLITDLIADSYEKFGDLTVRQIEKLRCR
HRIQVLQAHEDTTKENALRVVTPDVSLSPENLADVYDLFKTEHFINLYWGDGGTTLALQH
HDPGRPYVEQYRVDRVQFKSLYMLLVPWLCGFHTDTVAHRTFTLLDQDRDSLITFREFAG
WLDTLYFEELNEKVRLLYRLHIPPALTESEDDPSPLKSPQLSTTRPLHVELPNAPDVCVH
VEGEMRDFQEQLKQMLKDLAKEKEKDVEQPVPPMNQREFIQFCKTLYSMFHGNPDENELF
QAIATVTSLVLQIGEVGHRSRCSGSEVSSEGGDEVEDDHREGSQEDHPVFSTEEEEEEGE
RKEGTSKSSGSESQSEWAVSYAQILASLLTEQQLVNFFEKPMDLSAKVAEAKVKQYHERA
GLLMLQQGTS
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtggttgaatccggaggaagttttgctgaaaaatgcattgaagctttgggttaccgaa
aaatctaacgaattcttccttttgcagcgcagaagagggcatggggacacaggggggaaa
tttacaggtctactggtgggagctctggactcagtgctggactccaatgcccgggtcaca
ccgttccgtatcctactacagatgcctgggtcacaggtcagctggacaatagcttgtggt
gctgctgtcggagagatgaacagacattgggactggctggtccagaacctactccactct
ctctcagtgtttgagaacaaggaggatgtcgccagcttcgtaaaagggaaagtcaagggt
ctgatagcggaggaggtaagggggaggcaggcggctcaggaggaggagcctgagaagttc
cgggaggcgctgctgaagtttgagctatgtttcggcctgccctcctcagagaagctggtc
accacctactcctgctgctgctggaaggggcgggtcccccggcagggctggctctacctc
agcatcaaccacatggccttctactccttcctgttgggaaaggaagtgaagtttgtgatc
ccgtgggcggaggtgacgaggctggagcgggtctctacgggtctcatgacggacatggtg
cgtgtgatgacgcggcggtgccagttggacttctccatgttcctgagcctggatgaagca
tttggggtcattggtcagctggctgacatcgccctgcgacgcctgctggacagtgaaggc
ctggagctggaccgagtcctccagcagtcctccaacatcaccaagagggttctggaggag
caggcgttaaggacgtatgtcctggctctatttcggctaccacggggcgaacgtcttcag
gaggtggcgctgtgttcagtgtggacgccccatgcccgctgtcacacgacaggaacactc
ttcaccaccgacagctacctatgcttcgccagccgagaggagggccactgcagcctgctt
atccctctctcagaggtgatctccatagagaaggcggagagcaccagcctgctgccgaac
ccagtgatcgtcagcgtgaggagtaagaaagccttccagctgatcgagctgcaggacaga
gacagcctggtggacggcctgacatcacgcctcagagccctccagtggaaacactccatg
ttccgcagcaagaaatctctgacctcctcgtctccctactacaccttctgctatgacacc
atgtactgtgacggggaggatatcgaggagagagcactacgtcaaacagtgaacacagag
gctctgatggcatgctaccatcactctcaacctgaccccaacaacagcacggctaccatg
gagcaggtgaaagagcgtctatgggaggaccacttcccggagtacggtcgaggcgtccac
atgttccgcacagagaagatccagaagctggttgccatggggataccagagtcgctacgg
ggagagctatggatgaccttctctgatgcttcatcagagttggcatcccacccaggctac
tactcggggctggtgacagagtctatggggcaaagcagtctggccacggaggagatcgag
agagacctgcaccgctctctgccagaccaccctgccttccagaacgtcaaaggcattgcc
gcgttgcgccgtgtcctcaccgcatatgcccaccgcaaccccaagattggctactgccag
tcgatgaatatcctggcatctgtgctgctgctgtacactaaagaggaggaggccttctca
ctgctagtggctgtgtgtgagagaatgctacctgactacttcaaccgcagagtcataggt
gctcaggtggaccagtcagtgtttgaagagctgatccgggatcgtcttcccgagctggcc
gagcacattcccgacctctcccccctctcttccatctccctgtcctggtttctcaccctc
ttcctcagcgtgcttcccttccgcagcgctgtctgtgtggtagactgcttcttctttcac
ggcatcaaagccatcttccagctggggctagctgtgctggatgctaatgctacggcactg
tgtgctagtgcagatgacagccaggcactcatgatcctcactggttttctggaccaggtg
aagtacgatgaggatccatctccccctacccctacccctcaccctctctcgtctcagagt
ggggaagaggagggcagaccgcctgttaaacaacacaccctgatcactgacctcatcgct
gactcctatgagaaatttggagacctgacggtgagacaaatagagaagttgcgatgcaga
caccggatccaggttctccaagcacacgaggacaccaccaaggagaatgcgctcagggtg
gtgaccccagatgtctctctctcccctgaaaacctggctgatgtctacgacctcttcaag
acagagcacttcatcaacctgtactggggcgatgggggcaccacattggccctccagcac
catgacccaggccggccctatgtagagcagtacagagtggaccgggtccagtttaagagc
ctgtacatgctgctggttccctggctttgtggctttcatactgacaccgttgcccaccgg
accttcacgctactggaccaggacagagactcactcatcaccttcagagagttcgctggg
tggctggatacactatactttgaggaactgaatgaaaaggtcagactactgtatcgtttg
cacatacctccagctctgactgagagtgaggatgacccatctccactgaagagccctcag
ctgtccactaccagaccactccatgtagagctgcccaatgctcctgatgtgtgtgttcat
gttgaaggggagatgagagactttcaggaacagttgaaacagatgttgaaagacctggct
aaagagaaggagaaggatgtggagcaacctgtacctccaatgaaccagagggagttcatc
cagttctgtaagaccctctacagcatgttccatggcaacccagacgagaatgagctcttt
caggccatcgctacagtgaccagcctggtgctgcagatcggcgaggtcgggcaccgcagc
cgctgttcagggtcagaggtcagcagcgagggtggggacgaggtagaggacgatcacagg
gaggggagtcaagaagaccatcctgtcttcagcactgaagaagaagaagaagaaggagag
agaaaggaggggaccagcaagagttcagggtctgagagtcagagcgagtgggcggtcagc
tacgctcagatcctggcttctctcctcacagaacagcagctagtcaacttctttgagaaa
ccaatggacctgtcagcaaaggtggctgaggcaaaagtgaaacagtaccatgaaagggct
ggtctgcttatgctccagcaagggaccagctga
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