KEGG   Oncorhynchus keta (chum salmon): 118366871
Entry
118366871         CDS       T09424                                 
Symbol
snf8
Name
(RefSeq) vacuolar-sorting protein SNF8
  KO
K12188  ESCRT-II complex subunit VPS22
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118366871 (snf8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118366871 (snf8)
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118366871 (snf8)
Membrane trafficking [BR:oke04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-II complex
    118366871 (snf8)
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   118366871 (snf8)
SSDB
Motif
Pfam: EAP30 MarR_2 AbiEi_4 CDK5RAP3 MarR DUF4896
Other DBs
NCBI-GeneID: 118366871
NCBI-ProteinID: XP_035605564
LinkDB
Position
3:13048536..13054812
AA seq 258 aa
MHRRGVGAGAIAKKKLAEAKYKERGTVLAEDQIVQMSKQLETFKSNLEEFASKHKQEIRK
SSQFRVQFQEMCATIGVDPLASGKGFWSEMLGVGDFYYELGVQIIEVCLALKHRNGGLIT
LDELHHRVLKGRGKFAQDVSQDDLVRAIKKLKVMGNGFGMIPVGGSYLVQSVPAELNMDH
TVVLQLAEKKGYVSVSEIRESLKWERERACHVLDHLLKEGLAWLDSQASREPQYWLPALF
SELTSRDVTPEEANQITP
NT seq 777 nt   +upstreamnt  +downstreamnt
atgcataggagaggagtaggtgcgggagctatcgccaaaaagaagcttgcagaggccaaa
tataaagagagggggacagtgttagctgaggatcaaattgttcagatgtcaaaacagctg
gagaccttcaaatctaaccttgaggaatttgccagcaagcacaaacaagagattcgtaag
agttcccagttccgggtccagtttcaggagatgtgtgccaccattggagttgacccactt
gcctctggaaaaggcttttggtctgagatgcttggtgtgggtgacttctattacgagctg
ggtgtgcagatcattgaagtatgcctggcactgaaacacagaaatggaggacttattacc
ctggatgaactccatcacagagtgttgaagggaagggggaaatttgctcaggatgtgagc
caagatgacttggtgcgggccataaagaagctgaaagtcatggggaatggctttgggatg
attcctgttggaggctcttacctcgtgcagtcagtgccagcagagctcaacatggaccac
actgtggtacttcagctggctgagaagaagggctacgtttcagtgagtgagatcagagag
agtcttaagtgggagcgagagcgagcctgtcatgtgctggatcacctattgaaagagggc
ttggcgtggttggattcccaagcttctagagagccacagtattggctgccagccctcttt
tctgagctgacttcccgtgatgtcacacctgaggaggccaatcagataacgccttaa

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