Oncorhynchus keta (chum salmon): 118366881
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Entry
118366881 CDS
T09424
Name
(RefSeq) sorting nexin-4 isoform X1
KO
K17919
sorting nexin-4
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
118366881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118366881
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
oke04990
]
118366881
Membrane trafficking [BR:
oke04131
]
SNARE
SNARE associated proteins
Others
118366881
Protein recycling
Rab GTPases and associated proteins
Rab4 associated proteins
118366881
Autophagy
Cytoplasm to vacuolar targeting (CVT) pathway
Other Cvt associated proteins
118366881
Domain-containing proteins not elsewhere classified [BR:
oke04990
]
Phox homology (PX) domain-containing proteins
Sorting nexins
118366881
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PX
Vps5
OB_YrrC
Motif
Other DBs
NCBI-GeneID:
118366881
NCBI-ProteinID:
XP_035605579
LinkDB
All DBs
Position
34:26606595..26620724
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AA seq
437 aa
AA seq
DB search
MMADSGPEEIAVIGNTDLTSAELENNIKNTMVEIEKWTSLLRKMEISVGEAEKRTGKNTV
NMQEIYTVYLIETRPVDAVTEGIIPAPDSLWRRYSEFELLRNYLLVTYPFVVVAPLPEKR
AEIVWHKLSADNMDPDFVERRRVGLENFLLRLASHPVLCNDKIFYIFLTEEKGWKEMVYE
TGFQAKADSRLKAMNAAFRVKNPDKRFTELKHYSDELQTVVSQLLRVRARVADRLYGVYK
VHGNYGRVFSEWSAIEKEMGDGLQSAGHHMDAYAASVDDILEEEEHYADQLKEYLFYTEA
LRAVCRKHELTQFELEMAAQDLASKKQQKEELVTGTVRTFSLKGMTSKLFGQETAEQREV
KLQVLEQQIEEGEEAVKEKNAESDEFVKTAWIDIEHFKDQKDRDLKEALISYAIMQISRC
KKGIQVWTNAKECFNKM
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgatggcagactcgggacccgaggaaatagcggtgatcgggaacaccgacctcacatcg
gcagaactagagaacaacattaaaaacacgatggtcgagattgagaaatggactagtctt
ctaagaaagatggagatcagcgttggagaggcagagaaaaggaccgggaagaatacagtc
aacatgcaggagatatacactgtttacctaattgagacacggccggttgatgctgtgaca
gaaggtataatcccagccccagactccttatggaggagatacagcgagtttgagctacta
agaaactacttgttggtcacttatccctttgtcgttgttgccccgttacccgagaagagg
gcagagattgtgtggcacaagctgtcagcggacaacatggacccagactttgtggagaga
aggagggttggactggagaacttcctgctccgattagcctcccacccagttctctgcaac
gacaagatcttctacatcttcctcactgaggaaaaaggatggaaggaaatggtgtacgag
acaggatttcaagcaaaggctgattccaggttgaaagctatgaatgcagcattcagggtg
aagaatccagacaaacggtttacagagctgaaacactacagcgacgagctacagactgta
gtctcccagctgctgagagtacgggcaagggtagcagatcgactgtatggggtgtacaaa
gtgcatggaaactatggacgagtcttcagtgagtggagtgccatagagaaagagatggga
gatggactacaaagtgctggtcatcacatggatgcgtatgctgcttctgtagatgatatt
ctggaggaagaggagcactatgctgatcagctgaaggagtacctattctatactgaggca
ctaagggcagtgtgcaggaagcatgagttgacacagtttgagctggagatggctgcacag
gacttagcctctaaaaaacagcagaaggaggagctggtcacagggactgtgcggacgttc
tcactgaaggggatgaccagtaagctgtttggccaggagactgcagagcagagggaggtt
aagttacaagtgttagaacagcagatagaggagggagaggaggctgtgaaagagaagaac
gccgagagcgatgagtttgtgaagactgcctggatagacattgagcactttaaagaccaa
aaggaccgggacctgaaggaggccctgattagctatgcaatcatgcagatcagcaggtgt
aaaaagggaatacaagtgtggaccaacgcaaaggagtgtttcaacaagatgtga
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