Oncorhynchus keta (chum salmon): 118366930
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Entry
118366930 CDS
T09424
Name
(RefSeq) 60 kDa heat shock protein, mitochondrial
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
118366930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118366930
03110 Chaperones and folding catalysts [BR:
oke03110
]
118366930
03029 Mitochondrial biogenesis [BR:
oke03029
]
118366930
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118366930
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
118366930
Messenger RNA biogenesis [BR:
oke03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
118366930
Chaperones and folding catalysts [BR:
oke03110
]
Heat shock proteins
HSP60 / Chaperonin
118366930
Mitochondrial biogenesis [BR:
oke03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
118366930
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118366930
Exosomal proteins of other body fluids (saliva and urine)
118366930
Exosomal proteins of breast cancer cells
118366930
Exosomal proteins of colorectal cancer cells
118366930
Exosomal proteins of bladder cancer cells
118366930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Gag_p15
AcnX_swivel_put
Motif
Other DBs
NCBI-GeneID:
118366930
NCBI-ProteinID:
XP_035605678
LinkDB
All DBs
Position
34:complement(31553060..31560760)
Genome browser
AA seq
573 aa
AA seq
DB search
MLRLPTVMRQMRPVSRALAPHLTRAYAKDVKFGADARAMMLKGVDLLADAVAVTMGPKGR
TVIIEQSWGSPKVTKDGVTVAKAIDLKCKYQNIGAKLVQDVANNTNEEAGDGTTTATVLA
RAIAKEGFDSISKGANPVEIRRGVMLAVETVINELKRMSKPVTTPEEIAQVATISANGDV
EIGTIISNAMKKVGRKGVITVKDGKTLYDELEIIEGLKFDRGYISPYFINTAKGQKCEFQ
DAYVLLSEKKISSVQSIVPALELANQHRKPLVIVAEDVDGEALSTLVLNRLKVGLQVVAV
KAPGFGDNRKAQLHDMAVATGGTVFGDEAVGIALEDIQAHDFGKVGEVSVTKDDTMLLKG
KGDTAAIEKRQAEIVEQLENTTSDYEKEKLNERLAKLSDGVAVLKVGGTSDVEVNEKKDR
VTDALNATRAAVEEGIVPGGGCALLRSIPALDALVPINTDQKIGFDIIRRALRVPAMTIA
KNAGVEGSLVVEKILQAAGEIGYDAMEGEYVNMVEKGIIDPTKVVRTALMDAAGVASLLS
TAECVVTELPKDEKEAGMPGGMGGMGGMGGGMF
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgttgcgtctacccacagtgatgagacagatgaggccagtcagcagggccctggccccc
cacctcacccgggcttacgccaaggacgtcaagtttggagccgatgctcgggccatgatg
ctgaagggagtggatctgctggctgatgctgtcgctgtcaccatgggacccaagggtcgc
acagtcattatcgagcagagctggggcagccccaaggtgaccaaggacggcgtcactgta
gccaaggccatcgacctgaagtgcaagtaccagaacattggtgccaagctggtccaggac
gtggccaacaacacgaacgaggaagcgggagatggcaccaccactgccaccgtgctggcc
agagccatcgccaaggagggctttgacagcatcagtaaaggagctaaccctgtggagatc
cgccgtggcgtcatgctggctgtggagaccgtcatcaatgagctgaagaggatgtccaag
ccagtcaccacccctgaggagattgcccaggtggccaccatatctgctaatggagacgta
gagatcggcaccatcatctctaacgccatgaagaaagtgggccgcaagggggtcatcact
gtcaaggatggcaaaaccctttatgatgagcttgagatcattgaggggctgaagttcgac
cgcggatacatctccccttacttcatcaacacagccaaaggccagaagtgtgagttccag
gatgcctatgtgttgctgagtgagaagaaaatctcttctgtccagagcatcgtccctgcc
ctggaattggccaaccagcaccgcaaacctctggtcatcgtggccgaggatgtggacgga
gaggccctcagcaccctggtcctcaacaggctgaaggtgggactgcaagtggtggcagtc
aaggccccaggctttggagacaacaggaaggcccagctgcatgacatggccgttgccacc
gggggcactgtgtttggtgatgaggcggtgggcattgctctggaggacatccaggcccat
gactttggtaaggttggcgaggtgtctgtcaccaaggacgacaccatgctgctgaagggg
aagggagacactgcggccattgagaagcgccaggcagaaatcgttgagcagctggagaac
accactagcgactatgagaaggagaagctcaacgagaggctggccaagctgtctgacgga
gtggctgtgctcaaggtaggaggaacgagtgatgtggaggtgaacgagaagaaggaccgt
gtgaccgatgccctgaatgccaccagggccgctgtggaggagggcattgttcccggaggt
ggctgtgccctgctgcgctccatccctgccctggatgccctcgtgcccattaacactgac
cagaagattggatttgacatcatcagacgagccctgcgtgtgccagccatgaccattgcg
aagaacgctggtgtggagggctctctagtggtggagaagatccttcaggccgcgggggag
ataggatacgatgccatggagggagaatacgtcaacatggtagagaagggcatcatcgac
cccaccaaggtggtaagaacggcactgatggacgctgcaggtgtggcttctctgctctcc
accgccgagtgtgtggtcacagaactgcccaaggatgaaaaggaggctggcatgccaggg
ggcatgggtggtatgggtggcatgggaggtggcatgttctaa
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