Oncorhynchus keta (chum salmon): 118367135
Help
Entry
118367135 CDS
T09424
Name
(RefSeq) thyroid hormone receptor alpha-B isoform X1
KO
K05547
thyroid hormone receptor alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04080
Neuroactive ligand-receptor interaction
oke04081
Hormone signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
118367135
04081 Hormone signaling
118367135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118367135
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118367135
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118367135
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1A. Thyroid hormone receptor (THR)
118367135
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
zf-ANAPC11
Motif
Other DBs
NCBI-GeneID:
118367135
NCBI-ProteinID:
XP_035606109
LinkDB
All DBs
Position
3:13790605..13950947
Genome browser
AA seq
453 aa
AA seq
DB search
MRERERVFSELKHGWQQVHCTVDVSPICQLFERPATLLTMHILHSHCVIRWIDGPKRKRK
SSSCSVKSMSEMKGYGQTGSENTGYIPSYLEKDEPCVVCGDKATGYHYRCITCEGCKGFF
RRTIQKNLHPAYSCKYDGCCIIDKITRNQCQLCRFKKCIAVGMAMDLVLDDSKRVAKRRL
IEENREKRKKEEMVKTLQNRPEPTGSEWELIRMLTEAHRHTNAQGSHWKQKRKFLPEDIG
QSPVAPTSDGDKVDLEAFSEFTKIITPAITRVVDFAKKLPMFSELPCEDQIILLKGCCME
IMSLRAAVRYDPESETLTLSGEMAVKREQLKNGGLGVVSDAIFDLGKSLAQFNLDDTEVA
LLQAVLLMSSDRSGLTNIDKIEKCQETYLLAFEHYINYRKHNIPHFWPKLLMKVTDLRMI
GACHASRFLHMKVECPTELFPPLFLEVFEDQEV
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgagagagagagagagagtattttcagagctgaaacatggctggcagcaggttcactgt
acagtagatgtctctccaatttgccagctgtttgagaggccagccactcttttgacaatg
catattctacactcacactgcgttataaggtggatcgatggcccgaaaaggaaaagaaag
agcagctcatgttcggtgaagagcatgtctgaaatgaagggatacggacagactggatca
gagaatacagggtacatccccagctatctggaaaaggatgaaccgtgtgtggtgtgtgga
gacaaggccactggctaccattaccgctgcatcacctgtgagggctgcaagggtttcttt
cggcggacgattcagaagaacctccaccccgcctactcctgtaagtacgatggctgctgc
atcatcgacaagatcacccgcaaccaatgccagctgtgccgcttcaagaagtgcatcgca
gtgggcatggccatggaccttgtcctggacgactccaagcgggtggccaagcggcgtctg
atcgaggagaaccgggagaagaggaagaaggaggagatggtgaagaccctgcagaaccgg
ccagagcccaccggctcggagtgggagctgatccgcatgctgaccgaggcccaccgccac
accaacgcacagggctcccactggaaacagaaacgcaagttcctgccggaggacataggt
cagtctccggtggcccccacgtcggacggagacaaggtggacctggaggccttcagtgag
tttaccaagattatcacccctgccatcacccgcgtcgtcgactttgccaaaaaactgccc
atgttctcggagctgccttgtgaggaccagatcatcctattgaaaggctgctgtatggag
atcatgtcgctgcgcgccgccgtgcgctacgacccagagagcgagacgctgacccttagc
ggcgagatggcggtcaagcgggagcagttgaagaacggcggcctgggcgtggtgtcggac
gccatcttcgacctgggcaagagcctggcgcagttcaacctggacgacacggaggtggcg
ctgctgcaggccgtgctgctcatgagctcagaccgctcgggcctgacgaacattgacaag
atcgagaaatgccaggagacctacctgctggcgtttgaacactacatcaactaccgcaag
cacaacattccccacttctggcccaagctgctgatgaaggtgacggacctgcgcatgatc
ggggcatgccacgccagccgcttcctccacatgaaggtggagtgtccgacggaacttttc
ccccctctcttcctagaggtcttcgaggaccaggaagtgtga
DBGET
integrated database retrieval system
