Oncorhynchus keta (chum salmon): 118367172
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Entry
118367172 CDS
T09424
Name
(RefSeq) integrin beta-2-like
KO
K06464
integrin beta 2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04145
Phagosome
oke04514
Cell adhesion molecules
oke04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
118367172
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
118367172
09142 Cell motility
04810 Regulation of actin cytoskeleton
118367172
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118367172
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
oke04147
]
118367172
04515 Cell adhesion molecules [BR:
oke04515
]
118367172
04090 CD molecules [BR:
oke04090
]
118367172
Membrane trafficking [BR:
oke04131
]
Endocytosis
Phagocytosis
Integrins (complement receptors)
118367172
Exosome [BR:
oke04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
118367172
Cell adhesion molecules [BR:
oke04515
]
Integrins
Integrin beta subunits
118367172
CD molecules [BR:
oke04090
]
Proteins
118367172
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
Integrin_B_tail
PSI_integrin
EGF_integrin
vWA_SIBA-E
I-EGF_1
EGF_2
Motif
Other DBs
NCBI-GeneID:
118367172
NCBI-ProteinID:
XP_035606174
LinkDB
All DBs
Position
34:complement(42385228..42411725)
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AA seq
777 aa
AA seq
DB search
MYKCVSLLLLLMGRGVISQEVEVCSKTVINSCSDCIRSGAYCTWCKQLNFTKPGEQEAAR
CDTRAQLEERGCMGNDIISPMNTLTVTKNTALSTNAFVKDEPIQLRPQEVNLKLRPGLPR
TFKLDFRRVEGYPVDLYYLMDLSYSMEDDLRSIKTLGNELFKALQGITKQGRIGFGSFVD
KTVLPFTNTNPEKLKKPCEEKELFCQPAFGYRHVLSMTENKADFNREVDKQRISGNLDSP
EGTLDAIMQAAVCGDRIGWRNSSTRLIVLTTDDGFHMAGDGKLAGILEPNDERCYMDKQL
YTKSNDMDYPSVGQVASQLEKNNIQPIFAVTKNMENVYRELSRMIPKSEVGVLSEDSRNV
VELIQAAYNRLSSKVTVTHDALPDNVRVTYTPLCPGGGPAGDKGVCDNVKVGELVSFNVT
VTADECIDRERSFLIGPLGIKDKLKVSLSTRCECECDDPKEENHKDCDGKGKVNCGMCSC
NAGFVGQKCECAIGEKDESSLRAACRKDNGTECEGRGDCVCGICQCYAQQGGSTYYGTHC
ECENESCEKFQNKLCGGNGKCRCKICECNPEYEGTACQCKKSDEQCRTPSGSVCSGRGTC
QCNQCKCTEGYQRPYCLTCPACQTPCITKGKCIECLGFQTGPFSKNCSQTCKSINTFEMV
ETLPPGKPCDVRDTENCRVFFIIKQLDGEDNYSAQILKTRECPELPNIYAIIGGSIAGVA
LIGLLILLIIKAILYMRDVKEFRRFENEQKKGKWSPGDNPLFMNATTTVANPTFTGE
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atgtataagtgtgtgtctctcctactcctgctgatgggcagaggagttatctcccaggaa
gtggaagtatgttccaaaacggtgatcaactcctgcagcgactgcatcagatcaggagcg
tactgcacgtggtgtaaacaactgaacttcaccaagccaggtgagcaagaagcagctcgc
tgtgacacccgggctcagctagaagagaggggctgcatgggaaacgacatcatatccccc
atgaatacccttactgtgactaagaacaccgccctgtccaccaatgcatttgtcaaggac
gaacccatccagctgcgtcctcaggaggtcaatctgaagctcagaccagggctgcctcgg
acgttcaagctggactttcggagagtggagggctatcctgttgatctctactacctgatg
gatctctcctactccatggaggacgatctgaggagcatcaagactctgggaaacgagcta
tttaaagctctgcaaggaatcacaaaacaagggcgaataggcttcggctctttcgtagac
aagactgtcctgcctttcactaacaccaacccagagaagctgaagaagccatgtgaagaa
aaggagctgttctgtcaacctgcctttggctacagacatgttcttagcatgacagagaac
aaagctgactttaatagggaggtagacaagcagcgcatctctgggaacttggactcccct
gaagggacgctggacgccatcatgcaggctgcagtatgtggggacaggattggctggagg
aatagcagcactcggctaatcgtcctgaccaccgacgatgggttccacatggcaggggat
ggcaagctggctggcatactggagcccaacgacgagagatgttacatggacaagcagctg
tacactaagagcaatgacatggactacccatctgttggtcaagtggcttcacagttagag
aagaacaacattcagccaatctttgctgtgacaaagaacatggagaatgtatacagggaa
ctcagtagaatgatccccaagtctgaggtgggagtactgtcagaggactccagaaatgtt
gttgaattgatccaagctgcctacaataggctctcctccaaagtgacagtgactcatgat
gctctccctgacaatgtgagagtcacttacactccactctgccctggagggggacccgca
ggggacaagggggtctgtgataacgtcaaagtaggagaattggtgtctttcaacgtaaca
gtgacggcagatgaatgtatagacagggagaggtcttttctgattggcccattgggcata
aaagacaagctgaaggtgagcttgtcgactcgctgcgagtgtgaatgtgatgaccccaag
gaggagaatcacaaggactgcgacgggaagggcaaagtcaactgtggcatgtgcagttgc
aatgccggcttcgtgggtcagaagtgcgagtgcgccatcggggagaaggacgagagctct
ctgagggcggcatgccggaaggacaacggcacggagtgcgaaggacgaggggactgtgtg
tgtggcatttgccagtgctatgcccaacaaggcggcagcacctactacggcacgcactgc
gagtgtgaaaacgagagctgcgagaagtttcagaacaaactgtgtggagggaacgggaaa
tgccgttgtaaaatttgtgaatgcaaccccgagtacgaaggcaccgcctgccaatgcaag
aagtcggacgagcagtgtcgcacaccaagcgggagcgtgtgcagcggcaggggcacatgc
cagtgtaaccagtgcaagtgtaccgagggctaccagcggccctactgtctgacctgtccc
gcctgccagactccctgtataaccaaggggaagtgcatcgagtgtctgggctttcagaca
ggcccgttcagcaagaactgctcccagacctgtaagagtattaatacatttgagatggtg
gagacattgccacctggtaagccttgtgacgtgagggatacggagaactgccgggtgttc
tttatcattaaacagttggatggagaggacaactactccgcccagatactaaagaccaga
gaatgtccggagttgccaaacatctacgccatcattggaggctccattgcgggcgtggcc
ctgatcggcttactgatcctgctcatcatcaaagccatcctctacatgagagacgtgaag
gagtttcgcaggtttgagaatgagcagaagaaaggaaagtggtcgccgggagacaatcca
ctattcatgaacgcgaccaccaccgtggctaaccctaccttcactggagaataa
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