Oncorhynchus keta (chum salmon): 118367295
Help
Entry
118367295 CDS
T09424
Name
(RefSeq) nuclear factor of activated T-cells, cytoplasmic 1-like isoform X1
KO
K04446
nuclear factor of activated T-cells, cytoplasmic 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04010
MAPK signaling pathway
oke04020
Calcium signaling pathway
oke04148
Efferocytosis
oke04218
Cellular senescence
oke04310
Wnt signaling pathway
oke04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
118367295
04310 Wnt signaling pathway
118367295
04020 Calcium signaling pathway
118367295
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
118367295
09143 Cell growth and death
04218 Cellular senescence
118367295
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
118367295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118367295
Transcription factors [BR:
oke03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) NF-AT
118367295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RHD_dimer
RHD_DNA_bind
TIG
Pput2613-deam
Motif
Other DBs
NCBI-GeneID:
118367295
NCBI-ProteinID:
XP_052350061
LinkDB
All DBs
Position
34:complement(54461015..54550337)
Genome browser
AA seq
942 aa
AA seq
DB search
MQDTSCLRLSSKFNFGPVFPAALGKERGLHFLTSLATEMKSAEEDAYSYTPNVSLSLPLG
MGNPCLATQYHTMQSSPIISVSSCHQTGYGLHDHNNHNPAQGYYMSHGLRPNGAPALESP
RIEITAYHQYPEEEVEESSTMDHIVHHKRGVNSIVTLTLPNADGYRDPSCLSPASSVSSR
SCNSDASSYESGFYNYDNSPQNSPWQSPCVSPKGSSSLLSCPHAPLGPPSTSPRHSPSTS
PQIGAQAEEGWAGQGPCGSSRPNSPACSGGGGGVGVGKRKYSFNSTTYRQPTYSPNQSST
PSPRGSPRVSVTDDSWLANTNQYTNSAIVAAINALTTDGVVDMGEGIPVKARKTNLDHSP
TMSLKTEPGGEEMGPGSELLQEDYISRLPFKKENYCGGFLDVPQQPYSWSKPKPYLSSLP
ALDWQLPSCSGPYSLQIEMQPKSHHRAHYETEGSRGAVKAPSGGHPVVQLYGYMESEPLT
LQLFIGTADDRLLRPHAFYQVHRITGKTVSTASHEALQSNTKVLEIPLLPENNMRAIIDC
AGILKLRNSDIELRKGETDIGRKNTRVRMVFRVHINQPNGRTISLQASSNPIECSQRSAQ
ELPLVEKQSLDSYPATGGKKILLNGHNFLPDSKVVFVEKAQDGHHLWETEAKVDKDSFKS
TALVAEIPPYRNQRISSPVQVNFYVCNGKRKRSQYQRFTYLSPNVPTIKTEPNDEYEPLG
AHSKSYHGQPRLTPIIPVGDADTCLVGVYPPCPPCHGSIGSMPTSSPCSSPTLHDLSPVA
YPKCLSTSPTHAHNGLLASAIQETQGQCPAPLVCPSSPDQAPLGMLHSQGSSPHHLGSPG
PHGYHPLYPNSSPSTSPGSLPSTPGGAAESPFAQASPYSPTQGQSQTQARISPPSLLPVD
ASPPSLAVTVKREPQDLDQMYLDDVNEIIRNDLSSISVHLST
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atgcaggacaccagctgtttgagactcagctccaaattcaactttggtccagtcttccca
gcggctttgggaaaggaaagaggattgcactttctcacctctctcgctacggagatgaag
tctgcagaagaagatgcatatagctacactccaaatgtcagcctgtccctgccactgggc
atgggaaacccctgtctggccacccagtaccacacgatgcagtccagccccattatctcc
gtgtcctcctgccaccagacagggtacggtctccacgatcacaacaaccacaacccagcc
cagggctactacatgtcccacggcctgaggcctaacggggccccggccctggagagtcct
cgcatcgagatcacagcctaccaccagtaccctgaggaggaggtggaggagagcagcacc
atggaccacatcgtccaccacaagcggggggtcaactccatcgtgaccctgacgctgcca
aatgccgatggctaccgcgaccccagttgcctcagcccggccagcagcgtgtcatcacgt
agctgcaactcggatgcgtcgtcctacgagtccggcttttacaactatgacaactcaccc
cagaactcgccatggcagtctccttgcgtctctccgaaaggctcgtcctctctcctctcc
tgcccacacgctcctctcggccccccatcgacctccccccgccactcaccttccacctcc
ccccagatcggggcccaagctgaggagggctgggcggggcaagggccctgtggaagctcc
aggcccaactctccggcttgcagtggaggaggtggcggcgttggcgtggggaagaggaaa
tacagcttcaacagcaccacctacagacagccaacctactcgcccaaccagtcgtccaca
ccttccccgcgtggctcgcccagggtcagcgtcacagacgacagctggctggccaacacc
aaccagtacaccaactctgccatcgtggcggccatcaacgccctcaccaccgacggagtg
gtcgacatgggcgagggaatccccgtcaaggcccgcaaaaccaacctagaccacagcccc
acgatgagcctgaagacggagccgggaggagaggagatgggccctgggagcgagctcctc
caggaggactacatctcccgcctgcctttcaagaaggagaactactgtgggggctttcta
gacgtgccccagcaaccctactcctggtccaagccaaagccctacctcagctccctgcct
gccctggattggcagctgccgtcttgctctggcccgtacagtctgcagatcgagatgcag
cccaagtcccaccaccgtgcccactacgagacagagggcagccgcggggcagtcaaagct
ccgtccggaggtcatccggtcgtacagctctacggttacatggagagcgagccccttacc
ctgcagctgttcatcgggaccgcagacgaccgcctcctgcgaccgcacgccttctaccag
gtccaccgcatcacgggcaagactgtctctaccgccagccacgaggccctgcagtccaac
accaaggtgctggagatccctctgctgcccgagaacaacatgcgagccatcattgactgt
gcagggattctgaagctgcggaactctgacatcgagctgcgtaagggcgagacggacatc
gggcgcaaaaacacgcgtgtgaggatggtgttccgtgtgcacatcaaccagcccaatggc
aggaccatctccctacaggcctcctccaaccccatcgagtgctcccagcgctcggcacag
gagctgcccctggtagagaagcagagcctggacagctaccccgccacggggggaaagaag
atcctccttaacggacacaactttctgccagactcaaaggtggtgttcgtggagaaggcc
caagatggacaccacctatgggagacagaagccaaagttgacaaggactccttcaagtct
acggcgctggtggctgagatccccccctacaggaaccagagaatatccagcccagtgcag
gtcaacttctacgtctgcaatggcaagagaaagaggagccaataccagcgcttcacctac
ctttccccaaacgtcccgacaataaagacagaaccgaatgatgaatatgagcctctgggg
gctcattccaagtcttaccatggccaacccaggctcactcctatcatacctgtgggggac
gctgacacctgcctggtcggggtttatcctccctgcccgccttgccatggcagcattggc
agcatgccaacttcctccccctgttccagcccaacactgcacgacctgtcccccgtggct
taccccaagtgcctctccaccagccctacgcacgcccacaacggtctcttggcgtccgcc
atccaggagacgcaagggcagtgcccagcgccactggtctgcccttcctcacctgaccaa
gctccgctgggcatgctccactcccagggcagcagcccgcatcaccttggtagccccggt
ccccatggctaccacccactctaccccaacagcagcccctccacctcccctgggtccctc
ccctccactccagggggggcagcagagagcccgttcgcccaggcatcaccttacagcccc
acccagggacagagccagacccaggccaggataagtcctcccagcctgctgccggtagat
gccagccccccctccctagccgtcaccgtcaagcgggaaccccaggatctggaccagatg
tacctggacgatgtcaatgagatcatccgaaacgacctgtccagcatctcagtgcatctc
agtacataa
DBGET
integrated database retrieval system
