Oncorhynchus keta (chum salmon): 118367332
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Entry
118367332 CDS
T09424
Name
(RefSeq) replication protein A 32 kDa subunit-like
KO
K10739
replication factor A2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03030
DNA replication
oke03420
Nucleotide excision repair
oke03430
Mismatch repair
oke03440
Homologous recombination
oke03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
118367332
03420 Nucleotide excision repair
118367332
03430 Mismatch repair
118367332
03440 Homologous recombination
118367332
03460 Fanconi anemia pathway
118367332
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
oke03032
]
118367332
03400 DNA repair and recombination proteins [BR:
oke03400
]
118367332
DNA replication proteins [BR:
oke03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
118367332
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
118367332
MMR (mismatch excision repair)
118367332
DSBR (double strand breaks repair)
HR (homologous recombination)
118367332
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
TFA2_Winged_2
Motif
Other DBs
NCBI-GeneID:
118367332
NCBI-ProteinID:
XP_035606578
LinkDB
All DBs
Position
34:complement(56360323..56371437)
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AA seq
278 aa
AA seq
DB search
MWNQGGSYGESNMGGGYTQSPGGFASPAASQGGEKKGRQRAQQIVPCTVSQLMSAAQAED
VFKVGEVEVAQVTIVGIIRTTDKSMTNIQYKVDDMTGAPMDVKQWVDTEDPSVDSTVIPP
GTYVKVSGNLRSFQNHRSVVAFNVRPLQDMNEITSHMLEVVQAHMLLSKPQTIMMGGGGG
MNTSMVPMSRPGMGGNMGGGYSGANDMSTNGLSPSQNQVLSLIRSCPDAQGISTQNLKQS
LSGMSLAVIKQAVEFLSNEGHIFSTIDEDHFKSTDNDD
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgtggaaccaagggggatcatacggtgaatcaaacatgggaggtggatacactcagtcc
ccgggaggattcgcatcacctgctgcctcccagggaggagagaagaaagggagacaacgt
gcccaacagattgtcccctgcacagtgtcccagctcatgtctgctgcccaagcggaggat
gtcttcaaagtgggagaggtagaggttgcccaggttacaattgtgggcatcatcagaacc
actgacaaatccatgaccaacatccagtacaaagttgatgacatgacaggggcccctatg
gacgtgaaacagtgggtagatacagaggatcccagtgtagacagcactgtcatcccccca
ggcacttacgtcaaggtctctggcaatttgcgctccttccagaaccacaggtccgtggtg
gcgttcaacgtccggccccttcaggacatgaacgagatcacctcccacatgctggaggtg
gtgcaggcacacatgctgctcagcaaaccacagactattatgatgggcggaggaggggga
atgaacactagcatggtgcccatgtcacggccgggaatgggtggcaacatgggaggtgga
tactcgggtgctaacgacatgtccactaacggcctgagcccaagccagaaccaggtgctg
agcttgataaggagctgtccagacgcacagggtatcagcacacagaacttgaagcagagt
ctcagcggcatgagcttggctgtcatcaagcaagcagtggagttcctcagcaacgaagga
cacatcttctccaccatcgacgaggatcacttcaagtctacggacaatgacgactaa
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