KEGG   Oncorhynchus keta (chum salmon): 118367383
Entry
118367383         CDS       T09424                                 
Name
(RefSeq) DNA repair protein XRCC1-like
  KO
K10803  DNA-repair protein XRCC1
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    118367383
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:oke03400]
    118367383
DNA repair and recombination proteins [BR:oke03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     118367383
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT F5_F8_type_C
Other DBs
NCBI-GeneID: 118367383
NCBI-ProteinID: XP_035606676
LinkDB
Position
34:59580995..59604722
AA seq 632 aa
MPEIKLMQIVSCSTEDNTHKADNLLSSDTYRKWKAAKAGEKQTSVIIQFEKEEQVYSIDI
GNEGSAFIEVLVGHSTSVKDQDYEVLLVTSSFMSPTESRNSTNTNRVRFFGPTQLVKAQA
QEKWDRVKIVCSQPYNKSIAYGVAFVKFHSPSEKSDLPTTTTPKLTKLGQFRVKDEAPSA
CPSLQPGSLFFNRESTSKGSPALKVSPQTEKLSYAAATLQSGSGSGHSSAPPSSSSPPPQ
APVKRKFEFSKERRSALAPPPSKKPGPMGSPELGTTTPKPKVKPSTASTPSPSTDKASPA
QNTPDTKKKESLPKPEAKSRPKPSKAQSSSSEAPVPLNKIMEGVVFVLSGFQNPFRGDLR
DKALAMGAKYHSDWTPDATHLICAFSNTPKYSQVKSAGGVIVRKEWVLDCHKRKQKISFK
QYLMDGAESSSEGSDDEESEEEKERKTPQKRREEERQPTPRKTPIKKEEEDLYGGSTDAD
EPGDESGMDTEDELKRVESESRQKKGEKERKGVEEEDPFGGSTDENTDAEAVEDEPIPEL
PDFLTGKRFFLYGKFPNNDRRLLLRYIIAFNGAVEDYMSEKVQFVVTSEGWHDSFEDALM
ENGNLSFVKPTWIFAINDRQKTLPYQPYTVVP
NT seq 1899 nt   +upstreamnt  +downstreamnt
atgccggagataaaactcatgcaaatcgtgtcttgcagcactgaagacaatactcacaag
gctgacaacctgctgagctcggacacatacagaaaatggaaagcagcaaaggcaggggag
aaacaaacctcagtcattatacagtttgagaaagaagagcaggtgtacagcatagacata
ggaaatgaagggtctgcttttattgaggtgctggtgggacactcaacctctgtcaaagac
caggactatgaggttctgctggtcacgtcgtccttcatgtcccccacggagagccgtaac
agcaccaacaccaaccgtgtgcgcttcttcggccctacccagctggtgaaggctcaggcc
caggagaagtgggaccgcgtgaagattgtgtgtagccagccatacaacaagagcatagca
tacggagtggccttcgtgaagttccattcaccatcagaaaaaagtgatctaccaaccaca
acaacaccgaagttgaccaagcttggccagtttcgggtgaaggatgaggccccctcggct
tgccctagtcttcagccaggcagcctcttcttcaacagagagagcacctccaaaggcagc
ccagcgctcaaggtttcgccacagactgagaagctcagctatgcagctgccaccctgcag
tctgggtctgggtctggccactcctcagccccaccgtcctccagctctccaccaccacag
gcaccagtgaagaggaagtttgagttcagtaaagagcgccggtctgccctcgctccgccc
ccctcaaagaaacccggccctatgggctcccctgaactgggcactaccaccccgaaaccc
aaggtgaaacccagcacagccagtactcccagccccagtactgacaaagcctcccctgcc
cagaataccccagacaccaagaagaaggagagcctgcccaaaccagaagccaagtccaga
cccaaaccctccaaagcccagtccagctcttctgaggcccctgttcccctcaacaagatc
atggagggggtggtgtttgtgctgagcggcttccagaaccccttccggggggacttgagg
gacaaggccctggccatgggggccaaataccactctgactggacccctgacgccacacac
ctcatctgtgccttctccaacacccccaagtacagccaggtgaagtcagcagggggcgtc
atcgtccggaaggagtgggtgctggactgtcacaagaggaagcagaagatttccttcaaa
cagtacctgatggacggagcggagtccagctcggaggggagcgacgatgaggagagtgag
gaggaaaaagagaggaagactccacaaaagaggagagaagaagaacggcaacccactccc
agaaagacccccatcaagaaagaggaggaggatctgtatggtggttccacagacgcagat
gaaccaggagatgagtctggcatggacacggaggatgagctgaagagggtggagagcgag
agtcggcagaagaaaggagagaaggagagaaaaggagtggaggaggaggacccttttgga
gggtcgactgacgagaacactgacgctgaggccgtggaggacgagcccatccctgagcta
ccagatttcctaactggaaagcgatttttcctttacggcaagttccccaacaatgacaga
cgcctactcctgcgttacatcatcgccttcaacggggcggtggaggactacatgagtgag
aaagtccagtttgttgtcaccagcgagggatggcacgactcctttgaagacgcactgatg
gagaatggtaatttaagctttgtcaaacccacatggatttttgccatcaacgatcgacag
aagacgctgccatatcagccctacactgttgtcccttga

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