Oncorhynchus keta (chum salmon): 118367434
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Entry
118367434 CDS
T09424
Name
(RefSeq) nuclear receptor subfamily 1 group D member 2 isoform X1
KO
K08531
nuclear receptor subfamily 1 group D member 2
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118367434
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118367434
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118367434
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1D. Rev-Erb
118367434
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Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
118367434
NCBI-ProteinID:
XP_035606803
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All DBs
Position
34:complement(60895973..60905668)
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AA seq
648 aa
AA seq
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MIDAFNLSLLQCNHCATKDNRTLQSLKSNWRVIDNTFSQHRLLDPNIHGIEAPADMGSIK
TGGVITYISSGSASSPESCLSDSCSSSYLCSSPPHPSLPSRAVGIMVDIARTTTAKHPRS
HGTEKTGRSTSAKSSITKINGMVLLCKVCGDVASGFHYGVHACEGCKGFFRRSIQHSIRY
KKCLKMENCTVIRINRNRCQQCRFKKCLAVGMSRDSVRFGRIPKREKQRMLLEMQNAMNN
MMMNNNSQLRSILHGTQSPPCPMEGLPNDGSSSSSASSSSSSSSSSGSNPSSPRSVQDSL
ETSSSSASSCSSDSGDDEVPPSRVCHQGTFTYRREQQQSIKEEAEESPSQVAGETVKDRR
DRRMEELQESWNRCNDDARGYQPSCNSHQQVSNVPYREERVVYQQQPAQLDGAPSGGMPE
DSCSLHHRSDNTMHNVQTVSNDYSGPSYSLQDHKTNLVIPSLYVDTSQRSQEIWEEFSLS
FIPAVREVVGFAKRIPGFRDLPEYDQVSLLKNGTFEVLMVRFASLFDVSERTVTFLTGKC
YSLELLRAGELLTSMCDFSEKLAALQLDKDEMSLFIAVVLVSADRSGIQDLKSVEALQDT
LIRALQSLIMKNHSNETTTFTKLLLKLPELRSLNNIHSEELLAFKVHL
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacgcttttaatttgagtttgttacagtgtaaccactgtgctactaaggacaat
agaactttgcaatccttaaagtcaaactggcgagttattgacaatacatttagtcagcat
aggttgcttgatccaaatattcacggaatcgaggcgcctgcagacatgggatcaatcaag
actggtggtgtaataacttacatctcctctggctccgcctccagcccggagtcttgtttg
agtgacagttgcagcagcagctacctgtgctcctctccacctcatccctcactgccaagc
cgggcagtaggaatcatggtggacatcgcccgcactacaacagccaagcacccacgtagc
cacggcacagagaagactgggcgatctacctccgctaagagcagcatcaccaagatcaac
ggcatggtgttgttgtgtaaggtgtgcggtgacgtggcctcagggttccactatggcgtc
cacgcctgcgagggctgtaagggtttcttcaggaggagcatccagcatagcatccggtat
aagaagtgcctgaagatggagaactgcaccgtcataaggatcaacaggaaccgctgtcag
cagtgccgcttcaagaagtgtctggctgtgggcatgtctagagactctgttaggtttggc
cgcatcccaaagagagagaagcagcgcatgctgctggagatgcagaacgccatgaacaac
atgatgatgaacaacaacagccagctccgcagtatactccacggcacccagagtccaccc
tgccccatggaagggctccccaatgacggcagctcctcttcctctgcctcttcttcctca
tctagctcgtcttcatcaggctccaacccttcctcaccccgttccgttcaagactccctg
gagaccagctctagctccgcctcttcctgttcgtcggatagcggtgatgacgaggttcct
ccttccagggtgtgtcaccagggcacattcacgtaccgccgtgagcagcaacagtccatc
aaagaggaagcggaggagtcaccttcgcaggtcgccggggaaactgtaaaagacaggaga
gacaggcgcatggaggaactgcaggagagctggaaccgctgcaacgacgatgccaggggc
taccagcctagttgcaacagtcatcaacaagtctccaacgttccctaccgggaagagaga
gttgtttaccagcaacagcctgcgcagctagacggcgcccccagtggtggcatgccagaa
gactcctgcagcctccatcacaggagcgacaacacaatgcacaacgtacagaccgtctcc
aatgactacagtggaccatcatacagcctacaggaccacaagacaaacttggtcattcct
agtctctatgtggacaccagccagcgcagccaggagatctgggaggagttctccctgagt
ttcatcccggccgtgcgcgaggttgtggggtttgccaagaggatcccgggcttccgagac
ctccccgagtacgaccaagtcagcctgctcaaaaacggaacgtttgaggtgcttatggtg
cgcttcgcttctctgttcgatgtgtccgagcgcactgtgaccttcctgacggggaagtgt
tacagcttggagctgctgcgggccggggagctgctcacctccatgtgtgacttcagcgag
aagctggccgctctgcagctggacaaggatgagatgagcctcttcattgccgtcgtcctc
gtttctgccgatcgttcggggatccaggacttgaagtcagtggaggcgctgcaggacacg
ctgatccgagcgctgcagagtctgatcatgaagaaccactccaacgagactaccaccttc
accaagctgctgctgaagctgcccgagctgcgctccctcaacaacatacactctgaagaa
ctgctggccttcaaagtgcacttgtaa
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