Oncorhynchus keta (chum salmon): 118367435
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Entry
118367435 CDS
T09424
Name
(RefSeq) retinoic acid receptor beta-like isoform X1
KO
K08528
retinoic acid receptor beta
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118367435
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
oke03310
]
118367435
Transcription factors [BR:
oke03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
118367435
Nuclear receptors [BR:
oke03310
]
1. Thyroid hormone like
1B. Retinoic acid receptor (RAR)
118367435
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
DNA_ligase_A_N
Motif
Other DBs
NCBI-GeneID:
118367435
NCBI-ProteinID:
XP_035606805
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Position
34:complement(60867741..60885778)
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AA seq
453 aa
AA seq
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MFDYMDFLAVGPGEMLDFYTASPCMLQEPSVTACFTGLTETEWQVHRVAQSAVETQSSSS
EDQFASPLSPLPPPRTYKPCFVCQDKSSGYHYGVSACEGCKGFFRRSIQKNMVYTCHRDS
NCIINKITRNRCQYCRLQRCFAAGMSRECVAHKGNHTRAVRNDRSKRKEKKETPKMTIIE
TYELTAELGCIVEKICRAHRETFPSLCQLGKYTTNSSSDTRIQLDLGLWDKFSELATKCI
IRVVEFAKRVPGFTGLTITDQITLLKAACLDILILRICTRYTPDQDTMTFSDGLTLTRTQ
IHNAGFGPLTDQVFTFAGQLLPLEMDDTESGLLSAICLVSGDRQDLEEPSKVEVLQEPLL
EALKIYSRKRRPSMPLMFPKVLMKITDLRSISAKGAERVVTLKMEIPGSMPPLIQEMLEN
LENLEKQKHSEEEQRADKNITPTHTHSPCPHST
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgtttgactatatggattttctcgcagttggtccaggggaaatgctggacttctatact
gcaagtccttgtatgctccaggaaccatctgtaaccgcatgcttcactggactgacagaa
acggaatggcaagttcatcgggtcgcgcaatcagctgtggaaacccagagctccagctca
gaggaccagttcgccagtcctctctcacctctgccccctcctcgcacctacaaaccctgc
ttcgtgtgccaagacaagtcctcaggctaccattatggcgtcagtgcttgtgagggctgt
aagggtttcttccgtagaagtatccagaagaacatggtttacacgtgccaccgggacagt
aactgcatcatcaataagatcaccaggaaccgctgtcagtactgccggctacagaggtgc
ttcgccgcgggcatgtccagggagtgtgttgcccacaagggaaatcacaccagagctgtc
aggaatgaccggagtaagaggaaggagaagaaggagactcccaagatgaccatcatcgag
acatatgagctgacagcagaactgggctgtatagtagagaaaatctgtagggctcataga
gagaccttcccttccctctgccagttgggcaaatacactacaaactcaagctcagacact
aggatccagttggacctggggctgtgggataagttcagtgagctggccaccaaatgtatc
atcagggttgtggagtttgccaaacgggttcctggtttcaccggcctgactataactgac
cagatcaccctcctcaaagcggcctgtctggacatactgattctgcggatctgtacaagg
tacactcctgaccaggacactatgaccttctcagacgggctgaccttgacccgtacacag
atccacaacgctggctttggcccgctcacagaccaggtgttcaccttcgccggccagctg
ctgcccttggagatggatgacacagaaagtggcctcctcagcgccatctgcctggtgtct
ggagaccgccaggacctggaggagccgtctaaggtggaggtcctgcaagagcccttactg
gaggccttgaagatctactcccgtaaacgccggcccagcatgcccctcatgttccccaag
gtcctcatgaagataaccgacctgcgcagcatcagcgccaaaggagctgagcgagtggtg
acgttgaagatggagatcccaggttccatgcctcctcttatccaggagatgctggagaac
ctggagaacctggagaagcagaagcattctgaggaggagcagagagcagacaagaacatc
acacccacacacacacactctccatgtccacacagtacatag
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