KEGG   Oncorhynchus keta (chum salmon): 118367439
Entry
118367439         CDS       T09424                                 
Name
(RefSeq) ras-related protein Rab-5A
  KO
K07887  Ras-related protein Rab-5A
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke04137  Mitophagy - animal
oke04144  Endocytosis
oke04145  Phagosome
oke04148  Efferocytosis
oke05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:oke00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    118367439
   04145 Phagosome
    118367439
   04137 Mitophagy - animal
    118367439
   04148 Efferocytosis
    118367439
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    118367439
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:oke04131]
    118367439
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:oke04147]
    118367439
   04031 GTP-binding proteins [BR:oke04031]
    118367439
Membrane trafficking [BR:oke04131]
 Endocytosis
  Rab GTPases and associated proteins
   Rab GTPases
    118367439
 Endosome - Lysosome transport
    118367439
Exosome [BR:oke04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   118367439
  Exosomal proteins of other body fluids (saliva and urine)
   118367439
  Exosomal proteins of colorectal cancer cells
   118367439
  Exosomal proteins of bladder cancer cells
   118367439
GTP-binding proteins [BR:oke04031]
 Small (monomeric) G-proteins
  Rab Family
   Rab5/17/22/31 [OT]
    118367439
SSDB
Motif
Pfam: Ras Roc Arf GTP_EFTU Gtr1_RagA MMR_HSR1 RsgA_GTPase AAA_16 MCR_beta DUF1327
Other DBs
NCBI-GeneID: 118367439
NCBI-ProteinID: XP_052350197
LinkDB
Position
34:complement(61074891..61082960)
AA seq 216 aa
MASRGGATRPNGPNTGNKISQFKLVLLGESAVGKSSLVLRFVKGQFHEFQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNKESFARAKNWVKELQ
RQASPNIVIALAGNKADLANKRALDFQDAQSYAEDNSLLFMETSAKTSMNVNEMFMAIAK
KLPKNEPQAAGANSGRNRGVDLTETAQPASRSCCST
NT seq 651 nt   +upstreamnt  +downstreamnt
atggcaagtaggggtggcgcaacacgacccaatgggccgaacacaggcaacaagatctcc
cagttcaaattagtactcttaggggagtccgctgtgggaaagtccagtctggtacttcgt
tttgtcaagggccagtttcatgaattccaagagagcacaattggagctgccttcctgact
cagacagtatgtttggatgacacaacagtcaagtttgagatctgggacacagctggtcag
gagcgctaccacagcctagcacccatgtactacagaggtgcccaggctgccatcgtggtc
tacgacataactaacaaagagtcctttgcacgagcaaagaactgggttaaggagcttcag
agacaagccagtccaaatattgtaatagcgttggctgggaacaaagctgaccttgcaaac
aaacgagcattggattttcaggatgcccagtcatacgcagaggataacagtttactgttc
atggaaacatcagcaaagacctctatgaacgttaatgagatgttcatggctattgcaaag
aaattacccaagaacgagcctcaagctgccggagcgaacagtggacggaaccggggagtg
gatcttacggagacagctcagccagccagccgctcctgctgcagtacctaa

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