KEGG   Oncorhynchus keta (chum salmon): 118367458
Entry
118367458         CDS       T09424                                 
Name
(RefSeq) RNA-binding protein 8A-like isoform X1
  KO
K12876  RNA-binding protein 8A
Organism
oke  Oncorhynchus keta (chum salmon)
Pathway
oke03013  Nucleocytoplasmic transport
oke03015  mRNA surveillance pathway
oke03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:oke00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    118367458
  09122 Translation
   03013 Nucleocytoplasmic transport
    118367458
   03015 mRNA surveillance pathway
    118367458
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:oke03019]
    118367458
   03041 Spliceosome [BR:oke03041]
    118367458
Messenger RNA biogenesis [BR:oke03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     118367458
Spliceosome [BR:oke03041]
 Complex C
  Other components
   EJC/TREX
    118367458
SSDB
Motif
Pfam: RRM_1 RRM_3 RRM_5
Other DBs
NCBI-GeneID: 118367458
NCBI-ProteinID: XP_035606854
LinkDB
Position
34:61846199..61849894
AA seq 202 aa
MNTHQAGMLPGYRQRSRASAQKTGANNMADVLDLHEAGGEDFAMDEDGDDSIHKLKEKAK
RRKGRGFGSEEGARSRVREDYDTVEQDGDEPGPQRSVEGWILFVTGVHEEATEEDIHDKF
AEFGEIKNLHLNLDRRTGYLKGYALVEYETYKEAQAAMEGLNGQDMMGQPISVDWGFVRG
PPKSKRRSGGRRRSRSPDRRRR
NT seq 609 nt   +upstreamnt  +downstreamnt
atgaatacacaccaggcagggatgcttcccggatatcgtcaacgttcacgcgcatcagcg
caaaaaacaggagctaacaacatggcggacgtactagatcttcatgaagcgggaggcgag
gactttgctatggatgaggatggtgatgacagcatccacaagttaaaagagaaggcaaag
aggagaaagggacgaggttttggttcagaggagggagcgaggtccagagtgagagaggac
tatgatacagtggagcaggatggagacgagccaggtcctcagagatctgtggagggttgg
atccttttcgtgactggggtacatgaagaggcaactgaggaggacatccacgacaagttc
gcagagtttggagagatcaagaacctacatctgaacctggaccgaagaacaggttacctc
aagggttatgcgctggtggagtatgagacatacaaagaagcccaggcagccatggaaggg
ttgaatggccaggacatgatgggccagcctatcagtgtggactggggctttgtcagagga
ccacccaagagcaagaggaggagtggtggacggagacgcagcaggagtccagacaggaga
cgacgttga

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