Oncorhynchus keta (chum salmon): 118367478
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Entry
118367478 CDS
T09424
Name
(RefSeq) nestin isoform X1
KO
K07609
nestin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
oke04812
]
118367478
Cytoskeleton proteins [BR:
oke04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filaments
Type VI
118367478
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Filament
Motif
Other DBs
NCBI-GeneID:
118367478
NCBI-ProteinID:
XP_052350250
LinkDB
All DBs
Position
34:62296720..62307093
Genome browser
AA seq
1872 aa
AA seq
DB search
MELHSLRHHHSHQTDNKLQMLNLNQRLETYLGRVRLLEEENKLLCQELQALRVSGQGGRM
GLEDKLSLARQEVEEAWREKDRVEMELGSMDEELQVLGLQRRWEADAHVEVKKKLADSRK
EMEEEKRAQIWLREKVSQLEKEIQFQIQTHQEDVAGFQATLIQVRPALPSPPPQTGTQLP
SLQDLGEEYSQMAVRAWHEAAMVFQGQVDSLDESLNQARTRWAQVGQEKNESQLKLHALE
NELYSAQDRRQCLERSVAKQRDMQRQEIQNLQAHLEVLEMEKGALGNQIDTLLTESRGLV
QLKMSLGMEVATYRALLDNESLMRDFSSTNQLRSTYTSDGVPSSRGVKQSFQTQLATSHM
ISPFSTIHRASPRSNVTTMSASPIWTQNQVTLNETPESCRKTEEEHVDFDLGSNRQVIWS
TPYPKVPQDGISVDHFRPQDVHEEVNYAEPLSPPTEEAGADVVSWLGSDHKEQSMWDLEK
EEEDQNIVRTWVAKDKPVLEHAMSHQVEISFSMPTVFSNDAQELYSPSVSYERAGSVTGA
HSAFSANDDNDVPFEMSSEKEEPLLDLPYGPMNALEERDLETARKDAEWVGKEGLESETK
SVLEPAFETFTSSQAFEYNKPKEFNQEDNMSYASTQASHGSEEAFHHVKSVEEDVINLTK
EDDENYMSNKDEEQLEDELRPYGYGKDDCERLAGFNNENCVTERIDKFNREAIISYESAQ
ASHWSEEVFHHVERLKEGDIHFTKGDDENDMYNKREEQYALHPNGDVNDEWDRVGGCNEE
NGIRERMDEGMDQEGKDHMKEEEMWNNRETQPNQSDQEHIPSNVEKLNQFEQEHIPLGTE
NISDNDKEDHDEANYCQNTSVSWRAELEGDSYAQDNTLADTHPLIRYKSDETDANTQASH
MGESDSSDGEQDREVCQTGSGTWGEGKSKQFDTMGDLYEESEGDVIDQERNMGSTHQEDV
DASQTKEHATQENDEENAVDQLIQEAEEEQSYEELTEPGEYSMMCSDEDYNEERIDRLVE
QELENLSISSYSEHFNGQMIESESVLSLQIVSHTELSQTQDILYSEEVEQIHSERLNQSE
QEHTTSGGEELNQSEQDHMTSGGEELNQSEQDHMTSGGEKLNQSEQDHMTSGAEKLNQSE
QEHTTSGAEKLNKSEQEHIPSDREKLNLTEQDNIPLGGEELNQSEPGYITSGGENLNKSE
QEHIPSNGEKLNQSQQEHIPLGGEKMYQSVPEYIPQGKENMNQSEQENITSGGEKLNLYV
QENIPSDGEKINQYEQENIPSDREKLNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSE
PEYIPSGGEELNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSE
PEYIPSGGEELNQSEPEYIPSGREELNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSE
PEYIPSGREELNQSEPEYIPSGREELNQSEPEYIPSGREELNQSEPEYIPSGREELNQSE
PEYIPSGGEELNHSEPEYIPSGGEELNQSEPEYIPSGREELNQSEPEYIPSGGEELNQSE
PEYIPSGREELNQSEPEYIPSGGEELNQSEPEYIPSGREELNQSEPEYIPSEVMYSMTSR
IRMTPEHTSLRESSAEISKAEYLAQGNVFSEELGTEPIPDKIEGQDDQNLSMLTHEDFTE
SHSIHSSLNSRPASQTNMNNSDIEESNSTDDESPNASQYLQRTNEANLTADQVDLLDVEV
SHYEDCNALIEHSAEEVTSYQASHECLQTDKWEVLESQNKHLESGDPFAGHKRDSERSSK
TDSKGRDLHSFLSSGVHSNFWGSNLETGASYQPDEPYDHVTKLPNQNLALADNLSWVDLE
STGGQLEHKDGQ
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggagctccacagcctccgacaccaccacagccaccagaccgacaacaagctccagatg
ctgaacctcaaccagcgcctggagacctacctgggccgagtgaggctgctggaggaggag
aacaagctactatgccaggagctccaggccctgagggtcagtggccagggggggcggatg
ggcctggaagacaagctgagcctggccaggcaggaggtggaggaagcctggagggagaag
gaccgggtggagatggagctagggagtatggatgaggagctccaagtcctggggctgcag
agacggtgggaggcggacgcccatgtggaggtgaagaagaagctggcagacagcaggaag
gagatggaggaggagaagagggctcagatctggttaagagagaaggtgagccagctggag
aaagaaatccagttccagatacaaacccaccaggaagatgttgctggcttccaggctaca
ctaatccaagtcagacctgccctgccatcccctccaccccaaacaggcacccagcttccc
agcctccaggacctgggtgaggagtactcccagatggctgtcagggcatggcatgaggcg
gccatggtgtttcagggccaggtagacagcctggacgagtctctaaaccaggccagaacc
cggtgggcccaggtgggccaggagaagaatgagagccaactgaaacttcatgccctggag
aatgagctgtattcagcccaggatagaaggcagtgtctggagaggagtgtggccaaacag
agagacatgcagaggcaagagatacaaaacctgcaggcccatctggaggtgttggagatg
gagaagggggcactgggaaatcagattgacactcttctgacagaaagtaggggtctggtg
cagctgaagatgtctctaggcatggaggtggccacatacagagctttactggacaatgaa
agtctgatgagggatttctcttcaacaaatcagctaaggagtacctacacatctgatgga
gtccccagctctcgaggggttaagcaaagcttccagacacagctggctaccagtcacatg
atcagtcccttctctaccatccatagagcaagcccacgatccaatgtaaccacgatgtcc
gcatcaccaatctggactcaaaaccaggtaaccctgaacgaaacacctgagagttgtcga
aagacagaggaagagcatgttgactttgacttagggtccaaccggcaggttatttggtca
acgccttaccccaaagtaccacaggatggaatttcagtcgaccacttcagaccccaagat
gtccacgaagaagtcaactatgctgagcctctctcacctcccactgaagaggcaggagct
gatgttgtatcttggcttggttctgaccataaggaacaatccatgtgggatttagaaaag
gaggaagaggatcagaacatagtcagaacctgggttgctaaagacaaaccagttctggaa
catgccatgagtcaccaggttgagatcagcttcagtatgccaactgtattcagcaatgat
gctcaagagctctacagcccttcagtgagctatgagagagcaggttcagtgacaggggca
cattctgctttctcggcgaatgatgataatgatgtaccttttgaaatgtcttctgaaaag
gaggaacctctactagatctgccttacggtcccatgaatgcattggaggaaagagatctc
gaaacagcaaggaaagacgctgaatgggtggggaaagaaggcttggagtctgaaactaaa
tcagtgctagaacctgcatttgagaccttcacaagcagtcaagcttttgagtacaacaag
ccaaaagagttcaaccaagaggacaatatgtcatatgcatctactcaagcctcccacggt
tcagaagaggcatttcaccacgttaaaagtgtggaggaagatgttattaatctcacaaaa
gaggatgatgaaaactacatgtctaacaaagatgaggagcaattggaagatgaattgcgc
ccctatgggtatggtaaggatgattgtgaaagattggcagggttcaataacgaaaattgt
gtgacagaaagaatcgataagttcaaccgagaggcgattatctcatatgaatctgctcaa
gcttctcactggtcagaagaggtatttcaccatgttgaaagactgaaggaaggtgatata
catttcacaaaaggggatgatgaaaatgatatgtataataaacgtgaggaacaatatgca
ttgcaccccaatggggatgtaaatgatgaatgggatagagtgggaggatgcaatgaagag
aatggaattagagaaagaatggatgaaggaatggatcaagaaggaaaggatcatatgaaa
gaggaagagatgtggaataacagagaaacccaaccaaatcagtctgatcaagagcatata
ccttcaaatgtagagaaactgaatcaatttgagcaagagcatatacctttaggcacggag
aatatatccgacaatgacaaagaggatcatgatgaggcaaactactgtcaaaatacttct
gtttcatggagggctgagctagaaggtgacagctacgctcaggacaacacactggccgac
acacaccccctgatccgttacaagagtgacgagacggatgccaacactcaggcttcacac
atgggcgagagtgactccagtgatggtgaacaggacagggaggtttgccagacaggatca
ggcacctggggcgaaggcaagtccaaacagtttgacaccatgggggatctgtatgaagag
tcagaaggggatgtcatagatcaggaacgtaacatgggctccactcaccaagaggacgtg
gatgctagccaaacaaaggagcatgctacacaagagaacgatgaggagaatgcagtagat
cagttgattcaggaggcagaagaggaacaatcctatgaggaacttacagaacctggagag
tactccatgatgtgctctgatgaggactataatgaagaaagaattgatagattggtggag
caagagttagagaatttatctatatccagttacagtgaacactttaatgggcagatgatt
gagagcgagtcagtactgagtcttcaaattgtgtctcacactgaactttcccagacacaa
gacatattatacagtgaggaggtagagcagatacactcagagagactgaatcaatctgaa
caagagcatacgacctcaggcggcgaggaactgaatcaatctgagcaagaccatatgacc
tcaggcggcgaggaactgaatcaatctgagcaagaccatatgacctcaggcggcgagaaa
ctgaatcaatctgagcaagaccatatgacctcaggcgccgagaaactgaatcaatctgag
caagagcatacgacctcaggcgccgagaaactgaataaatctgagcaagagcatataccc
tcagacagagagaaactgaatctcaccgagcaagataatatacctttaggcggagaggaa
ctaaatcaatccgagccagggtatataacttcaggcggagagaatttgaataaatctgag
caagagcatataccttcaaacggagaaaaattgaatcaatcccagcaagagcatatacct
ttaggcggagagaaaatgtatcaatccgttccagagtatataccccaaggcaaagagaac
atgaatcaatccgagcaagagaatataacttcaggcggagagaaactgaatctatatgtg
caagaaaatataccctcagacggcgagaaaattaatcaatacgagcaagagaatatacct
tcagacagagagaaactgaatcaatctgagccagagtatataccctcaggtggagaggaa
ctgaatcaatctgagccagagtatataccctcaggtggagaggaactgaatcaatctgag
ccagagtatataccctcaggtggagaggaactgaatcaatctgagccagagtatataccc
tcaggtggagaggaactgaatcaatctgagccagagtatataccctcaggtggagaggaa
ctgaatcaatctgagccagagtatataccctcaggtggagaggaactgaatcaatctgag
ccagagtatataccctcaggtggagaggaactgaatcaatctgagccagagtatataccc
tcaggtagagaggaactgaatcaatctgagccagagtatataccctcaggtggagaggaa
ctgaatcaatctgagccagagtatataccctcaggtggagaagaactgaatcaatctgag
ccagagtatataccctcaggtagagaggaactgaatcaatctgagccagagtatataccc
tcaggtagagaggaactgaatcaatctgagccagagtatataccctcaggtagagaggaa
ctgaatcaatctgagccagagtatataccttcaggtagagaggaactgaatcaatctgag
ccagagtatataccctcaggtggagaagaactgaatcattctgagccagagtatataccc
tcaggtggagaagaactgaatcaatctgagccagagtatataccctcaggtagagaggaa
ctgaatcaatctgagccagagtatataccctcaggtggagaggaactgaatcaatctgag
ccagagtatataccctcaggtagagaggaactgaatcaatctgagccagagtatataccc
tcaggtggagaggaactgaatcaatctgagccagagtatataccctcaggtagagaggaa
ctgaatcaatctgagccagagtatataccctcagaggttatgtattcaatgacctctagg
attcgaatgacacctgaacacacatctcttagagaaagttcagcagaaatatccaaagca
gaatatttggctcaaggtaatgtcttcagtgaggaactgggaactgaacctataccagac
aaaatagaaggacaggatgaccagaacctttctatgctgactcatgaagactttactgaa
agccattctatccacagcagtttaaacagcaggcctgcgagtcaaaccaacatgaacaac
tcggatatagaagagtccaacagcacagatgatgagtctccaaatgcaagccagtatttg
caacgtaccaacgaagcaaatctaactgcagatcaggtagacttgttagatgtggaggtc
tctcactatgaggattgcaatgctcttatagaacattctgcagaggaggtcactagctat
caggcaagtcatgaatgtcttcagacagacaaatgggaagtcttagaaagtcaaaacaaa
cacctggaatctggagatccttttgcaggtcacaagagagactcggagagatcatccaaa
actgacagcaaaggccgggacctccacagcttcctcagctctggtgtacacagcaacttc
tggggttccaatctggaaacaggagcctcctatcaaccggacgagccatatgaccatgtg
accaagctacccaatcagaacctagccttggctgataacctatcctgggtggatttggaa
tccacaggcggccaattggaacataaagatggacagtga
DBGET
integrated database retrieval system