KEGG   Oncorhynchus keta (chum salmon): 118367478
Entry
118367478         CDS       T09424                                 
Name
(RefSeq) nestin isoform X1
  KO
K07609  nestin
Organism
oke  Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:oke00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:oke04812]
    118367478
Cytoskeleton proteins [BR:oke04812]
 Eukaryotic cytoskeleton proteins
  Intermediate filaments
   Intermediate filaments
    Type VI
     118367478
SSDB
Motif
Pfam: Filament
Other DBs
NCBI-GeneID: 118367478
NCBI-ProteinID: XP_052350250
LinkDB
Position
34:62296720..62307093
AA seq 1872 aa
MELHSLRHHHSHQTDNKLQMLNLNQRLETYLGRVRLLEEENKLLCQELQALRVSGQGGRM
GLEDKLSLARQEVEEAWREKDRVEMELGSMDEELQVLGLQRRWEADAHVEVKKKLADSRK
EMEEEKRAQIWLREKVSQLEKEIQFQIQTHQEDVAGFQATLIQVRPALPSPPPQTGTQLP
SLQDLGEEYSQMAVRAWHEAAMVFQGQVDSLDESLNQARTRWAQVGQEKNESQLKLHALE
NELYSAQDRRQCLERSVAKQRDMQRQEIQNLQAHLEVLEMEKGALGNQIDTLLTESRGLV
QLKMSLGMEVATYRALLDNESLMRDFSSTNQLRSTYTSDGVPSSRGVKQSFQTQLATSHM
ISPFSTIHRASPRSNVTTMSASPIWTQNQVTLNETPESCRKTEEEHVDFDLGSNRQVIWS
TPYPKVPQDGISVDHFRPQDVHEEVNYAEPLSPPTEEAGADVVSWLGSDHKEQSMWDLEK
EEEDQNIVRTWVAKDKPVLEHAMSHQVEISFSMPTVFSNDAQELYSPSVSYERAGSVTGA
HSAFSANDDNDVPFEMSSEKEEPLLDLPYGPMNALEERDLETARKDAEWVGKEGLESETK
SVLEPAFETFTSSQAFEYNKPKEFNQEDNMSYASTQASHGSEEAFHHVKSVEEDVINLTK
EDDENYMSNKDEEQLEDELRPYGYGKDDCERLAGFNNENCVTERIDKFNREAIISYESAQ
ASHWSEEVFHHVERLKEGDIHFTKGDDENDMYNKREEQYALHPNGDVNDEWDRVGGCNEE
NGIRERMDEGMDQEGKDHMKEEEMWNNRETQPNQSDQEHIPSNVEKLNQFEQEHIPLGTE
NISDNDKEDHDEANYCQNTSVSWRAELEGDSYAQDNTLADTHPLIRYKSDETDANTQASH
MGESDSSDGEQDREVCQTGSGTWGEGKSKQFDTMGDLYEESEGDVIDQERNMGSTHQEDV
DASQTKEHATQENDEENAVDQLIQEAEEEQSYEELTEPGEYSMMCSDEDYNEERIDRLVE
QELENLSISSYSEHFNGQMIESESVLSLQIVSHTELSQTQDILYSEEVEQIHSERLNQSE
QEHTTSGGEELNQSEQDHMTSGGEELNQSEQDHMTSGGEKLNQSEQDHMTSGAEKLNQSE
QEHTTSGAEKLNKSEQEHIPSDREKLNLTEQDNIPLGGEELNQSEPGYITSGGENLNKSE
QEHIPSNGEKLNQSQQEHIPLGGEKMYQSVPEYIPQGKENMNQSEQENITSGGEKLNLYV
QENIPSDGEKINQYEQENIPSDREKLNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSE
PEYIPSGGEELNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSE
PEYIPSGGEELNQSEPEYIPSGREELNQSEPEYIPSGGEELNQSEPEYIPSGGEELNQSE
PEYIPSGREELNQSEPEYIPSGREELNQSEPEYIPSGREELNQSEPEYIPSGREELNQSE
PEYIPSGGEELNHSEPEYIPSGGEELNQSEPEYIPSGREELNQSEPEYIPSGGEELNQSE
PEYIPSGREELNQSEPEYIPSGGEELNQSEPEYIPSGREELNQSEPEYIPSEVMYSMTSR
IRMTPEHTSLRESSAEISKAEYLAQGNVFSEELGTEPIPDKIEGQDDQNLSMLTHEDFTE
SHSIHSSLNSRPASQTNMNNSDIEESNSTDDESPNASQYLQRTNEANLTADQVDLLDVEV
SHYEDCNALIEHSAEEVTSYQASHECLQTDKWEVLESQNKHLESGDPFAGHKRDSERSSK
TDSKGRDLHSFLSSGVHSNFWGSNLETGASYQPDEPYDHVTKLPNQNLALADNLSWVDLE
STGGQLEHKDGQ
NT seq 5619 nt   +upstreamnt  +downstreamnt
atggagctccacagcctccgacaccaccacagccaccagaccgacaacaagctccagatg
ctgaacctcaaccagcgcctggagacctacctgggccgagtgaggctgctggaggaggag
aacaagctactatgccaggagctccaggccctgagggtcagtggccagggggggcggatg
ggcctggaagacaagctgagcctggccaggcaggaggtggaggaagcctggagggagaag
gaccgggtggagatggagctagggagtatggatgaggagctccaagtcctggggctgcag
agacggtgggaggcggacgcccatgtggaggtgaagaagaagctggcagacagcaggaag
gagatggaggaggagaagagggctcagatctggttaagagagaaggtgagccagctggag
aaagaaatccagttccagatacaaacccaccaggaagatgttgctggcttccaggctaca
ctaatccaagtcagacctgccctgccatcccctccaccccaaacaggcacccagcttccc
agcctccaggacctgggtgaggagtactcccagatggctgtcagggcatggcatgaggcg
gccatggtgtttcagggccaggtagacagcctggacgagtctctaaaccaggccagaacc
cggtgggcccaggtgggccaggagaagaatgagagccaactgaaacttcatgccctggag
aatgagctgtattcagcccaggatagaaggcagtgtctggagaggagtgtggccaaacag
agagacatgcagaggcaagagatacaaaacctgcaggcccatctggaggtgttggagatg
gagaagggggcactgggaaatcagattgacactcttctgacagaaagtaggggtctggtg
cagctgaagatgtctctaggcatggaggtggccacatacagagctttactggacaatgaa
agtctgatgagggatttctcttcaacaaatcagctaaggagtacctacacatctgatgga
gtccccagctctcgaggggttaagcaaagcttccagacacagctggctaccagtcacatg
atcagtcccttctctaccatccatagagcaagcccacgatccaatgtaaccacgatgtcc
gcatcaccaatctggactcaaaaccaggtaaccctgaacgaaacacctgagagttgtcga
aagacagaggaagagcatgttgactttgacttagggtccaaccggcaggttatttggtca
acgccttaccccaaagtaccacaggatggaatttcagtcgaccacttcagaccccaagat
gtccacgaagaagtcaactatgctgagcctctctcacctcccactgaagaggcaggagct
gatgttgtatcttggcttggttctgaccataaggaacaatccatgtgggatttagaaaag
gaggaagaggatcagaacatagtcagaacctgggttgctaaagacaaaccagttctggaa
catgccatgagtcaccaggttgagatcagcttcagtatgccaactgtattcagcaatgat
gctcaagagctctacagcccttcagtgagctatgagagagcaggttcagtgacaggggca
cattctgctttctcggcgaatgatgataatgatgtaccttttgaaatgtcttctgaaaag
gaggaacctctactagatctgccttacggtcccatgaatgcattggaggaaagagatctc
gaaacagcaaggaaagacgctgaatgggtggggaaagaaggcttggagtctgaaactaaa
tcagtgctagaacctgcatttgagaccttcacaagcagtcaagcttttgagtacaacaag
ccaaaagagttcaaccaagaggacaatatgtcatatgcatctactcaagcctcccacggt
tcagaagaggcatttcaccacgttaaaagtgtggaggaagatgttattaatctcacaaaa
gaggatgatgaaaactacatgtctaacaaagatgaggagcaattggaagatgaattgcgc
ccctatgggtatggtaaggatgattgtgaaagattggcagggttcaataacgaaaattgt
gtgacagaaagaatcgataagttcaaccgagaggcgattatctcatatgaatctgctcaa
gcttctcactggtcagaagaggtatttcaccatgttgaaagactgaaggaaggtgatata
catttcacaaaaggggatgatgaaaatgatatgtataataaacgtgaggaacaatatgca
ttgcaccccaatggggatgtaaatgatgaatgggatagagtgggaggatgcaatgaagag
aatggaattagagaaagaatggatgaaggaatggatcaagaaggaaaggatcatatgaaa
gaggaagagatgtggaataacagagaaacccaaccaaatcagtctgatcaagagcatata
ccttcaaatgtagagaaactgaatcaatttgagcaagagcatatacctttaggcacggag
aatatatccgacaatgacaaagaggatcatgatgaggcaaactactgtcaaaatacttct
gtttcatggagggctgagctagaaggtgacagctacgctcaggacaacacactggccgac
acacaccccctgatccgttacaagagtgacgagacggatgccaacactcaggcttcacac
atgggcgagagtgactccagtgatggtgaacaggacagggaggtttgccagacaggatca
ggcacctggggcgaaggcaagtccaaacagtttgacaccatgggggatctgtatgaagag
tcagaaggggatgtcatagatcaggaacgtaacatgggctccactcaccaagaggacgtg
gatgctagccaaacaaaggagcatgctacacaagagaacgatgaggagaatgcagtagat
cagttgattcaggaggcagaagaggaacaatcctatgaggaacttacagaacctggagag
tactccatgatgtgctctgatgaggactataatgaagaaagaattgatagattggtggag
caagagttagagaatttatctatatccagttacagtgaacactttaatgggcagatgatt
gagagcgagtcagtactgagtcttcaaattgtgtctcacactgaactttcccagacacaa
gacatattatacagtgaggaggtagagcagatacactcagagagactgaatcaatctgaa
caagagcatacgacctcaggcggcgaggaactgaatcaatctgagcaagaccatatgacc
tcaggcggcgaggaactgaatcaatctgagcaagaccatatgacctcaggcggcgagaaa
ctgaatcaatctgagcaagaccatatgacctcaggcgccgagaaactgaatcaatctgag
caagagcatacgacctcaggcgccgagaaactgaataaatctgagcaagagcatataccc
tcagacagagagaaactgaatctcaccgagcaagataatatacctttaggcggagaggaa
ctaaatcaatccgagccagggtatataacttcaggcggagagaatttgaataaatctgag
caagagcatataccttcaaacggagaaaaattgaatcaatcccagcaagagcatatacct
ttaggcggagagaaaatgtatcaatccgttccagagtatataccccaaggcaaagagaac
atgaatcaatccgagcaagagaatataacttcaggcggagagaaactgaatctatatgtg
caagaaaatataccctcagacggcgagaaaattaatcaatacgagcaagagaatatacct
tcagacagagagaaactgaatcaatctgagccagagtatataccctcaggtggagaggaa
ctgaatcaatctgagccagagtatataccctcaggtggagaggaactgaatcaatctgag
ccagagtatataccctcaggtggagaggaactgaatcaatctgagccagagtatataccc
tcaggtggagaggaactgaatcaatctgagccagagtatataccctcaggtggagaggaa
ctgaatcaatctgagccagagtatataccctcaggtggagaggaactgaatcaatctgag
ccagagtatataccctcaggtggagaggaactgaatcaatctgagccagagtatataccc
tcaggtagagaggaactgaatcaatctgagccagagtatataccctcaggtggagaggaa
ctgaatcaatctgagccagagtatataccctcaggtggagaagaactgaatcaatctgag
ccagagtatataccctcaggtagagaggaactgaatcaatctgagccagagtatataccc
tcaggtagagaggaactgaatcaatctgagccagagtatataccctcaggtagagaggaa
ctgaatcaatctgagccagagtatataccttcaggtagagaggaactgaatcaatctgag
ccagagtatataccctcaggtggagaagaactgaatcattctgagccagagtatataccc
tcaggtggagaagaactgaatcaatctgagccagagtatataccctcaggtagagaggaa
ctgaatcaatctgagccagagtatataccctcaggtggagaggaactgaatcaatctgag
ccagagtatataccctcaggtagagaggaactgaatcaatctgagccagagtatataccc
tcaggtggagaggaactgaatcaatctgagccagagtatataccctcaggtagagaggaa
ctgaatcaatctgagccagagtatataccctcagaggttatgtattcaatgacctctagg
attcgaatgacacctgaacacacatctcttagagaaagttcagcagaaatatccaaagca
gaatatttggctcaaggtaatgtcttcagtgaggaactgggaactgaacctataccagac
aaaatagaaggacaggatgaccagaacctttctatgctgactcatgaagactttactgaa
agccattctatccacagcagtttaaacagcaggcctgcgagtcaaaccaacatgaacaac
tcggatatagaagagtccaacagcacagatgatgagtctccaaatgcaagccagtatttg
caacgtaccaacgaagcaaatctaactgcagatcaggtagacttgttagatgtggaggtc
tctcactatgaggattgcaatgctcttatagaacattctgcagaggaggtcactagctat
caggcaagtcatgaatgtcttcagacagacaaatgggaagtcttagaaagtcaaaacaaa
cacctggaatctggagatccttttgcaggtcacaagagagactcggagagatcatccaaa
actgacagcaaaggccgggacctccacagcttcctcagctctggtgtacacagcaacttc
tggggttccaatctggaaacaggagcctcctatcaaccggacgagccatatgaccatgtg
accaagctacccaatcagaacctagccttggctgataacctatcctgggtggatttggaa
tccacaggcggccaattggaacataaagatggacagtga

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