Oncorhynchus keta (chum salmon): 118367515
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Entry
118367515 CDS
T09424
Name
(RefSeq) SWI/SNF complex subunit SMARCC1-like isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118367515
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
oke03021
]
118367515
03036 Chromosome and associated proteins [BR:
oke03036
]
118367515
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118367515
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118367515
PBAF complex
118367515
GBAF(ncBAF) complex
118367515
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
HEAT_GCN1
BRCT
Chromo
BRCT_2
Motif
Other DBs
NCBI-GeneID:
118367515
NCBI-ProteinID:
XP_052350352
LinkDB
All DBs
Position
34:complement(63264173..63281160)
Genome browser
AA seq
1052 aa
AA seq
DB search
MATAVTAAGGTGSGGPAAGPVGVGTTVGRKKDGGPSSKYWESAETVSQIDSVRQWIGKHY
KKYVQADSPSNKSLAGLVVQLLQFQEDAFGRRVNNPALTKLPTKTFLDFKAGGALCHILG
STYKFKSEQGWRRFDLQNPSRMDRNVEMFLNVEKTLVQNNCLTRPTVFLVPDMEQKQANK
LKDIIKRHQGSITEDKSKATHHIYPSLTQQEDEEWLRPVMRKDKQMLVHWGMYPDSYDTW
VSTSDVEGDVEDPPTSEKPWKVHAKWVLDTDAFNEWMNEEDYEVDENKKTVSFRQRIFPK
EEESSRTPDRKERKANAAGKKRRRSPSPPTTPAESRKKGGKKGNPGSHWKRRGHRGEDEE
EEEDLTKDMEDPSPVPSMEEVTLPKNVNSKKDSENTPVKGGAVADLDDLEDDSVVSGGKE
EEEQGKAEVNRLIDSSEDNVTEQTHHIIIPSYAAWFDYNCIHEIERRALPEFFNGKNKSK
SPEIYLAYRNFMIDTYRLNPQEYLTSTSCRRNLTGDVCAVMRVHAFLEQWGLVNYQVDAE
SRPLPMGPPPTPHFNVLADTPSGLTPMHHRPPQIPSGQQMLNFPEKGKDKPSDMQNFGLR
NDLYSKKNPKIKGTSGGREWTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLR
LPIEDPYLENSESSLGPLAYQPVPFSQSGNPVMSTVAFLASVVDPRVASAAAKAALEEFS
RVREEVPAELVEAHVKKVQEAARSTGKVDPAYGLESSGIAGTAPEEPEKTEPAETEKMDT
DSDSQQPDKAESKDEAEKPSESAEKLAEGEKVKSEMAEPSEREEGESEGGEGKATADKDK
EEAMETSEEDKEEQGTMEEEEEERKKLEPDGGEGNIATAAAAALASAATKAKHLAAVEER
KIKSLVALLVETQMKKLEIKLRHFEELETIMDREKEALELQRQQLLTERQAFHMEQLKYA
EMKARQQMEQQQASAAAQGPAPHHGPPGPGMHHGPPHHGPPPAMHSGHGPPGPGFHPMGP
HHPQPTGPMGGPGQPMPGRMMPGGPPLAACLP
NT seq
3159 nt
NT seq
+upstream
nt +downstream
nt
atggcgacagcggtaactgcagcgggtggaacgggttcagggggacctgcagccggccct
gtgggcgttggtactacggtgggccgtaagaaagatggaggtccttcgtcgaaatactgg
gagagcgcagaaacggtctctcagatcgattcggtgcgccaatggatcgggaaacactac
aaaaagtatgtccaggcagactctccttccaataagtccctggcagggctggtggtgcag
ctgcttcagttccaggaagatgcttttggacggagggtgaacaaccctgccctcaccaag
ttacctaccaagaccttcctggacttcaaggcagggggtgctctgtgtcatatcctgggc
tccacctacaagttcaagagcgagcagggctggcgtaggtttgacctgcagaacccctcc
aggatggacaggaatgtggagatgttcttgaatgtagagaagaccctggttcagaataac
tgcctgactcgaccaaccgtgttcctggtgcctgacatggagcagaagcaggccaataag
ctgaaggacatcatcaaaagacaccagggctctatcaccgaggacaagtctaaggccacc
catcatatctacccctctctaacccagcaggaggatgaggagtggctgcgtccggtcatg
cgtaaggacaagcagatgctggtgcactggggcatgtacccagacagttatgacacctgg
gtgtccaccagtgacgtggagggggatgtggaggacccacccacctctgagaagccctgg
aaggtgcatgccaagtgggtcctggacaccgatgccttcaacgagtggatgaatgaggaa
gactatgaggtggacgagaacaagaagactgtgagcttccgccagaggatcttcccaaag
gaggaggagtcttcccgtacacccgatcgcaaggagcgcaaggccaacgccgccgggaag
aagaggcggcgctcgccatctcccccgaccaccccagccgagtcccgcaagaagggtggc
aagaaggggaaccctgggtctcactggaagcgtcgtggccaccgtggcgaggacgaggag
gaggaagaggacctgaccaaggacatggaggacccctcgcctgttcccagcatggaggag
gtcactttgcccaagaacgtgaactctaagaaagacagcgagaacaccccagtgaaggga
ggggcagtggcagatttggatgatctggaggatgactctgtggtctctggaggcaaggag
gaggaggagcagggcaaggccgaggtcaaccgcctcatcgactccagcgaggacaatgtg
accgagcagacccaccacatcatcatccccagctacgccgcctggttcgactacaactgt
atccacgagattgagaggcgtgcactgccagagtttttcaacggcaagaacaagtccaag
tccccagaaatatacctggcctaccgtaacttcatgatcgacacttaccggctcaacccc
caggagtacctgacctccacctcctgccgcaggaacctgacgggagacgtgtgtgccgtc
atgagggtccatgcgttcctggagcagtgggggctggtgaactaccaggtggatgctgag
agccgccccctccccatgggccccccgcccaccccccacttcaacgtgctggctgacacc
ccctctggcctgacgccgatgcaccaccgccccccacagatcccctctggccagcagatg
ctcaacttcccagagaagggcaaagacaagccctctgacatgcagaactttggcctgcgt
aatgacctctactccaagaagaaccccaagattaaaggaaccagtggcggccgggagtgg
accgagcaggagactctgctcctactggaggctctggagatgtacaaggacgactggaac
aaggtgtcggagcacgtgggctcgcgcacccaggacgagtgtatcctgcacttcctgcgt
ctgcccatcgaggacccctacctggagaattctgagtcgtccctgggccccctggcctac
cagcccgtacccttcagccagtcaggaaaccctgtcatgagcaccgtggccttcctggcc
tccgtggtggacccccgtgtggcctccgctgccgccaaggcagccctggaggagtttagc
cgtgtgcgtgaggaggtgccagcagagctggtggaggcccatgtgaagaaggtgcaggag
gcggcccgcagcacgggcaaggtagaccccgcctatggcctggagagcagtggcatcgca
ggaaccgcccccgaggagcccgagaagaccgagccagcagaaacagagaagatggacaca
gactccgactcccagcagcctgacaaggctgagtctaaggacgaggcagagaagcccagt
gagtctgctgagaagctggctgagggagagaaggtgaagagcgagatggccgagccgtcg
gagcgggaggagggggagagcgagggaggagagggcaaggctacagcagacaaagacaag
gaggaggccatggagacctcggaggaggacaaggaggagcagggaacgatggaagaggag
gaagaggaaaggaagaagttagagccagacggaggggagggtaacattgccactgctgcc
gctgctgccctcgcctcagctgccaccaaggccaagcacctggcggcggtggaggagagg
aagatcaaatctctggtggctctgctggtggagactcagatgaagaagctggagatcaag
ctcagacactttgaggagctggaaaccatcatggaccgagagaaagaggctttggagttg
cagaggcagcagctgctgacggagcgccaggccttccacatggagcagttgaagtatgct
gagatgaaggcccgccagcagatggagcagcagcaggccagtgcagcggcccagggcccc
gcaccccaccatggccccccagggccaggcatgcaccacggacccccccaccacggaccc
cctcccgccatgcactctggacacggcccccccggccccgggttccaccccatgggtccc
caccacccgcaaccgacaggaccaatgggagggcccggtcagcccatgccagggcgcatg
atgcccggtggccccccactggcagcatgcctcccatga
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integrated database retrieval system
