Oncorhynchus keta (chum salmon): 118367617
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Entry
118367617 CDS
T09424
Name
(RefSeq) DENN domain-containing protein 4B-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118367617
Membrane trafficking [BR:
oke04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118367617
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
PPR_3
PPR_long
DUF2464
PPR
ARM_UBP24_USP9X-Y
SPA
DUF4616
Motif
Other DBs
NCBI-GeneID:
118367617
NCBI-ProteinID:
XP_052350393
LinkDB
All DBs
Position
34:65058536..65096382
Genome browser
AA seq
1497 aa
AA seq
DB search
MTEEKCPQLVDYFVVAGLAPGGSAPLDEEGQQRGGRVVEPVIDLAVIARGLGEEVPEGFT
CIEKTQGGHPAGLSAGLINNPHMYLCYRRGHDKPPILDLGVLYEGKEVVKQGWNVIETTP
YSRSASLSSGGPATHRTFLTYRRAPESQALHTLGVTDISLLLPSKGEVAPHTFCRVEKNL
NTGIWGPALYLCYKRAVAKANALVYEAGLISRYPEADVESFPLPESVPMFCLPMGVTVES
WPLNTKYQLPVFSTFVLTSACGDKVYGAAIQFYEAFPRECLSERQSVRLGLVSVVDRRPI
TNRTLQVKKSVCVLSHWPFFTVFQKFLTFVYRYSISGPHVLPLEKHISSFMHNVPFPSPQ
RPRILVQLSPYDNLLLCQPVSSPLLLSGASFVKLLQNLGPENACVLLLAVLTEHKLLLHS
LRPDVLTSVSEALVSMTFPLRWHCPYIPLCPLRLADVLCAPMPFIVGVHSSYFDLYDPPT
DVVCVDLDTNTIFQAEDKKPLSWRSLPRKQGKMLVNTLTNLMKTLEKIYTTGQEEATLEF
LLTDYDLIYGRQKQLELEIQEAFLRFMSCLLRGYRAYLLPITQAPSDRTTDCSSLFNLQG
FLKSRERTHQKFYTQLTRTQMFTQFIEECSFVSDRHACLEFFDECVQKQSDVEKPEEVRL
IDLDEAHSGEHTVFIMPPEEPQEPDGSECPTHYSYETFPVLCMDLFDRPQDQLRVPTKGS
APSSPAPRRTKQEIKLAQKRAQIYSAVPDMWSKCLLGHCYGLWFIYLPTFVRAESAKVRA
LQTAYEVLKHMETRKVVLPDEVCYRILMQLCGQYGQPVLAVRVLLEMKKAGITPNTITYA
YYNKAVLESKWPSTNQGGRLRWAKLRNVLMAVAQFRQPIKQRLKSGSVRSRTDTMDSNQR
SRPQSNLIRQSSWSGLSESSSHESLTGSMVKSNSLNSMRGSTDKSKLSMKAVLGNPGANG
CSNPASRKPPVGPRDTTTPSPFPPGGVLVRRDQVCLSTFYKDCAETAVSDPDCSCQPEDR
DGRPPGPRDTVSRKAVDENYNNVSPPSRGSLAGKLQQLLTPTRHRVSGRRAASVDARRSG
GENGPVRRVSEQRLSRKAQVAESLLKAKERLYTATSESSLSVGSDVDLPETTNLAFPLRK
SWDTNQEGAGLEVSMSSCSLCRSCNSLVYDEEIMAGWTSDDSNLNSSCPFCSTTFVPLLN
AEICDLGPISSLERTNWNMDEEVESAAKSPGDQEAILGHNGVSEDSSSETSSYSESSSAT
MGSSVGGSPQVTVAYLSPLVLRKELESLLENEGEAVLSQGQLLDSHSIIFWNMVWYFHRL
GLPSNLLQLVRSSPLANQLAQTSENSAVRVRLLWDTLTPDTDYWPPLYILWRIHSGVPMR
NHSWRRHNHPFTLAFLEEVLRWVGMNEVHKGITLFLETIAKQPGTPKIQRSLYREMLFLT
LAAMGRDHVAAFDKKYKAAYQRLSGSLGREELRRKRAQPPSPKAVDCRRSFLLPLEC
NT seq
4494 nt
NT seq
+upstream
nt +downstream
nt
atgacggaggagaaatgcccccagctagtggactactttgtggtggcagggctggctccg
gggggctcggccccactggacgaagagggccagcagagagggggccgggtggtggagccg
gtcatagacctggcggtgatcgcccggggcttgggggaggaggtgcccgagggcttcacc
tgcatcgagaagacccaggggggccacccggccgggctgagcgccggactcatcaacaac
ccccacatgtacctgtgttaccgccgtgggcatgacaagccacccatcctcgacctcggg
gtgctgtacgagggcaaagaggtggtgaagcagggctggaatgtgatcgagaccaccccc
tacagccgctcagccagcctgagctccggggggcctgccacccaccgcaccttcctgacc
taccgccgggccccagagtcccaggccctccacaccctgggggtcacagacatctccctc
ctgctgcccagcaagggggaggtggccccccacaccttctgccgggtggagaagaacctc
aacactggcatatggggtccagccttatacctgtgctacaagagagctgtagccaaagcc
aacgccctagtctatgaagcaggtctgatcagtcggtatcctgaagcggacgtggagtcg
ttccccctgccagagtctgtgcctatgttctgtctgcccatgggtgtgacggtggagagc
tggcccctcaacaccaagtaccagctccctgtcttctctaccttcgtcctcaccagcgcc
tgtggcgacaaggtttacggtgctgccatccagttctacgaggcgttcccacgggagtgc
ctctcggagcggcagagcgtccgtctgggcctggtgagcgtggtggaccggcggcctatc
accaaccgcaccctgcaagtgaagaagagtgtgtgtgttctctcccactggcccttcttc
accgtcttccagaagttcctcaccttcgtctaccgatactccatctccggaccccacgtg
ctgccacttgagaagcacatctccagcttcatgcacaacgtcccgttcccctcccctcag
cgacctcgcatcctagtgcagctctccccctatgataaccttctcctctgtcagcctgtc
tcctcccccttactactcagtggtgccagctttgtgaagctgctgcagaacctgggccct
gagaacgcctgtgtcctgctgctggctgtgctgacggagcacaaactactgctacactcc
ctccgccccgacgttctcacctccgtcagcgaggccctggtatctatgacgttccctctg
cgttggcactgcccgtacatccccctgtgcccgctgcggctggcagacgtactgtgtgcc
cccatgcccttcattgtgggcgtccactccagctactttgacctctatgacccccctact
gacgtggtgtgtgttgacctggacaccaacactatctttcaagcagaggacaagaagccg
ttgtcatggcgatcactaccaaggaagcaaggcaagatgctggtgaataccctcaccaac
ttgatgaagacactggagaaaatctataccaccggccaagaggaggccactctggagttc
ctgctgacagactatgacttgatctacgggcgtcagaagcagctggagctggagatccag
gaggccttcctgcgtttcatgagctgcctgctcaggggctaccgtgcctacctgttgccc
atcacccaggccccctcagacaggactaccgactgcagctccctcttcaacctgcagggc
ttcctgaagtctcgtgaacgcacccaccagaagttctacacccagctgaccaggacccag
atgttcactcagttcatcgaggagtgctcattcgtcagtgaccgccacgcctgtctggag
ttcttcgacgagtgtgtccagaagcagtcggatgtggagaagcctgaggaggtgcgtctg
atagacctggatgaggcccacagtggggagcacacggtcttcatcatgcccccagaggaa
ccccaggagccagacggttcagagtgccccactcactacagctatgagacattccctgtg
ctctgcatggatctttttgaccggcctcaggaccagctacgtgtccctaccaaggggagt
gccccgagcagccctgccccgcgacggactaaacaggagattaagctggcacagaagcgg
gcacagatatactcggcagtgcccgacatgtggtccaaatgcctgctgggccactgctat
gggctgtggttcatatacctgcccacctttgtgcgggcggagagtgccaaggtgcgtgcc
ttgcaaacggcatacgaggtgctcaagcacatggagaccaggaaggtggtactaccagat
gaggtgtgttacaggatcctgatgcagctgtgtggacagtacgggcagcctgtgctcgct
gttagggtacttctggagatgaagaaagctgggatcacacccaacaccatcacctatgca
tactacaacaaggcagtgctggagagcaagtggccctccaccaatcaaggtggccgtctg
cgctgggccaagttgcgcaacgttctgatggccgtggcgcagttcagacagccaatcaaa
caacggctgaagagtggttcagtacgctcgcggacagatacaatggacagtaaccaacgg
tcccgcccacaatctaacctgattcgtcagtccagctggagcggcctgagtgaaagctcc
agccacgaatcgctgacggggtctatggtgaagagcaacagcctgaacagcatgagaggc
tcaacagacaaatctaagctctcaatgaaagcggtgctcgggaacccaggtgccaatggc
tgcagcaatcctgcctcccgtaaaccccccgtggggccacgagacaccaccaccccttct
ccctttccccctggtggtgtcctggtgcgccgcgaccaggtgtgcctgtccaccttctac
aaagactgtgccgagacggccgtctctgaccccgactgcagctgccagcctgaggacaga
gacggcaggccacctgggcctagagacactgtgagccgcaaggccgtggacgagaactac
aataatgtgtcaccgccgagtcggggaagcctggcagggaaactacagcagctgctcaca
cctactcgccatcgagtctcggggcggcgggccgcaagtgtagacgctcggcgctcgggg
ggtgaaaacgggccggtgcgcagagtgtcggaacagaggctgtcccgaaaagcccaggtg
gctgagagcctgctgaaggctaaggagaggctctacactgctacctctgagagttctctg
tcggtggggagtgacgtcgaccttcctgaaaccaccaatttggcctttcctctccgcaag
tcctgggacaccaaccaagagggagcaggattagaggtgtcgatgtcgagctgctccctg
tgtcggagctgtaactccctggtctatgatgaggagataatggccgggtggacgtctgac
gactccaacctcaactccagctgtcccttctgctcgaccaccttcgtcccccttctcaac
gctgagatctgtgacctaggacccatcagcagcctggaacgtaccaattggaacatggac
gaggaggtggaaagcgcagccaagtcccctggtgaccaggaggccatcctgggtcacaac
ggtgtgagtgaggactccagctctgagaccagcagttattctgagagcagcagcgctacc
atgggatcatcggtgggcgggtcgccccaggtgacggtggcctacctgagcccattggtg
ctgcgcaaggagcttgagagcctgctggagaacgagggtgaggcggtgctgtcgcagggc
cagctcctggacagccactccatcatcttctggaacatggtttggtacttccatcgcctg
ggcctgcccagcaacctgctgcagctggttcgctcctcaccgttggccaaccaactagca
cagacttcagagaactcagcagtgagggtgaggctgctgtgggacacactgacccctgac
acagactactggccccccctctacatcctgtggaggatacacagtggcgtacccatgcgg
aaccacagctggcggaggcacaaccaccccttcaccctggccttcctggaggaagtgctg
cgctgggtcggcatgaacgaggtacacaagggaatcactctcttcctggaaaccattgcc
aagcaaccaggcacgcccaagatacaaaggagtctgtacagagagatgctcttcctcacg
ctggctgccatgggtagagatcacgttgctgcgtttgataagaaatacaaggctgcgtac
caacggctgagtggctccttgggccgcgaggagctccgcaggaagcgagcccaaccacct
agccccaaggctgtggactgcagacggagcttccttctgcccctcgagtgctaa
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