Oncorhynchus keta (chum salmon): 118367638
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Entry
118367638 CDS
T09424
Name
(RefSeq) Wilms tumor protein 1-interacting protein-like
KO
K16682
LIM domain-containing protein
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
118367638
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118367638
03036 Chromosome and associated proteins [BR:
oke03036
]
118367638
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
118367638
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
118367638
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
118367638
NCBI-ProteinID:
XP_052350519
LinkDB
All DBs
Position
34:68579088..68618695
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AA seq
680 aa
AA seq
DB search
MDKYDDLDLEASKFLEDLNMYEASRDGLFRMKKDARNNSDFEETRRVFASKMTKIHIQKQ
QEEIAKSNLVVRMNGGQNRAADSTFYTKDRPPINSYRPAGEAAAKPPILSGPLPGTASGA
SQYAPYDALKHHSPSQQSYGYGNNYDNKERFEPHSYHHALSPTSPGNAHTHASGHPASPS
GTSASYSSRGGQASSGSSSPAGSSGLMCSPSQQPPHHSPSPPFSDSLQSPSPTMLHQSKA
ATLLVQQRPPVLADAGAAADWMRSLGHPDLLAPLPLSAFTGGADLYQQLSPQLATVTPPT
GPYSAASSMSPRSTANHGNLGQNGLSQSPVVLTPSPTLAQVAVPAPPAPPSEAAQPKATA
GAYFPASASPSGISVSRSFGQGQGVGQAQGRQVAMGVDVPSGLDSQLSSGGEACQPQPQS
EAPSTPRALKLPSQTLHVQPEQGPSAAEIKLEALTKRLEKEMDAQPKADYFGSCVKCNKA
VYGATEACQAMGSLYHDVCFTCSACSRRLRGKAFYYVGGKVFCEEDFLYSGFQQSADKCN
ACGHLIMDMILQALGRSYHPGCFRCVICNDSLDGVPFTVDTENKIYCVKDYHRVLAPKCA
ACNQPILPSEGSDETIRVVSMDKDYHVECYHCEDCQMELNDEEGHRCYPLDGHLLCHACH
LKHIEPGCASPTAASYQHQF
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggataaatacgacgatttggatcttgaggcaagtaagtttttagaagacctcaatatg
tatgaggcatctagggacgggctattccgaatgaagaaggatgcacggaacaactccgac
tttgaagaaaccaggagagtttttgcctccaaaatgacaaaaatccacatacagaaacag
caagaggaaattgccaaaagcaatttggtagtgagaatgaacgggggtcaaaacagagcg
gcagacagcacgttttacaccaaagacaggccgcctatcaatagctacagaccggcaggg
gaagctgcagccaagcctcccatactctctggccctttgccaggcaccgccagtggcgcg
agtcagtacgcgccctatgacgctctgaaacaccattcacccagtcaacagtcatatggc
tacggaaacaattacgataacaaggagcgttttgagccgcattcttaccaccacgccttg
agtcccaccagccctgggaacgcacacacacatgcttctggtcaccctgccagtccctcg
ggcacttcggcctcttactcctccaggggtggccaggcctcctcaggatcctccagccct
gctggatcatcaggccttatgtgcagcccatctcagcagcccccacaccactcaccatct
ccccccttctctgacagcctacagtctccgagccccactatgctgcaccagagcaaggct
gccaccctactggtgcagcagagaccccccgtgttggctgatgctggggctgcagcagac
tggatgcggagcttggggcacccagacctgttagcaccgctccctctgagtgccttcact
ggcggagctgacctgtaccagcagctgtctccccaacttgccactgttacaccgccaaca
ggcccttactcagcagcatcctctatgagcccaagatcaacagccaaccatggaaatcta
ggccagaacgggctctctcagagtcctgtggttctcacccccagccccacccttgctcaa
gtggctgtcccagccccacctgcacccccatctgaggcagcccagcccaaagccacagct
ggagcttacttccctgcctctgcctctccctctggaatcagtgtctctagaagctttggc
cagggtcaaggtgtaggccaggcgcagggcaggcaagtggccatgggggtggatgtgccc
tctggcctagacagccagctgtcctctggtggtgaggcatgccaaccccagccccagtct
gaagcccccagcacccccagagctctcaaactgcccagccagactctccatgtccagccg
gagcaggggccgtctgcggccgagatcaaattagaagccctgaccaagcgtctggagaag
gagatggacgcccagcccaaggcagactacttcgggagctgtgtgaagtgtaacaaggcg
gtgtacggagccactgaggcctgccaggctatgggaagcctctatcatgatgtctgcttc
acctgcagcgcctgcagcagaaggctacgggggaaagcattttactacgtcggtgggaag
gtgttctgtgaagaggacttcctgtattctggattccagcagtctgcagacaagtgtaac
gcatgcggacatctgatcatggatatgatcctgcaggcccttgggaggtcctaccaccct
ggctgtttccgttgtgtcatctgtaatgacagtctggacggagtgcccttcactgtggac
acagagaacaagatttactgtgtcaaagactaccacagggtcttggcccccaaatgtgca
gcatgtaaccagcccattctgccttcagagggctctgatgaaaccatccgagtggtatcc
atggataaagactaccacgtggagtgctatcactgtgaagactgtcagatggagctgaac
gacgaggaggggcaccgctgctacccgctggacggccacctcctctgccacgcctgccac
ctgaagcacatcgagccgggctgcgcctcgcccaccgctgcctcctaccagcaccagttc
tag
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