Oncorhynchus keta (chum salmon): 118367639
Help
Entry
118367639 CDS
T09424
Symbol
ascc3
Name
(RefSeq) activating signal cointegrator 1 complex subunit 3
KO
K18663
activating signal cointegrator complex subunit 3 [EC:
5.6.2.4
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
oke03400
]
118367639 (ascc3)
Enzymes [BR:
oke01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
118367639 (ascc3)
DNA repair and recombination proteins [BR:
oke03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
118367639 (ascc3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
ResIII
Helicase_C
AAA_22
Helicase_PWI
Motif
Other DBs
NCBI-GeneID:
118367639
NCBI-ProteinID:
XP_052345853
LinkDB
All DBs
Position
31:complement(19855866..20017256)
Genome browser
AA seq
2209 aa
AA seq
DB search
MSPPRLTGALRSFSTVSKQEDFTEEVYDLKTKRLKRQELFSREGLTWQKIVQFFTQHLEK
AEQQAAAQELKSILQAAKQIVGTEHGQDTIESAAVFLFETFHNKDHVGHEETRAIKQMFG
PFPSSAADASCAAVSRAVAPLGESQVEEFVRSQSSCRAPQRGSAFGRNITFSYDCYTLDP
QEALPWAGGPEDETPGGGLDFHSFLNNHQGRRSNGGEADGGRLSPGGAQSSGDGTILRGE
VEKYLNGGNMISSSPEELCTSLFEMLASTKSDDELQNELFELLGPEGFEMISVLLQRRSS
IVDSLLSIPADRINYPPDGSRGGEGGSKPTYGCQVTIQSGKEKEMMKMHRREEKRERKRG
ERRWDDTESSSDLYFDPKEMRAQREQALLTARRSPVLSRERVYERIRYPNVYDCYAEATK
TSAFVGGAKLMLPEGIKRENNKMYEEVEIPPSDPMSIGFEEKPIYISELDEIGQLVFKGM
QRLNRIQSIVFETAYNTNENLLICAPTGAGKTNIAMLTVLHEIRQHLQPGGVIKKDEFKI
VYVAPMKALAAEMTNYFSKRLEPLGIAVKELTGDMQLTKGEILRTQMLVTTPEKWDVVTR
KSVGDVALSQIVKLLILDEVHLLHEDRGPVLESLVARTLRQVESTQSMIRILGLSATLPN
YLDVASFLHVNPYIGLFYFDSRFRPVPLGQSFVGIKSTNKIQQLHDMEEVCYDKVLEQIR
NGHQVMVFVHARNATVRTAMGLIEMAKNRGESSFFQPDHGPDYGQCEKSIQRSRNKQMKE
MFPDGFGIHHAGMLRADRSLMESMFSRGYLKVLCCTATLAWGVNLPAHAVIIKGTQIYDA
KRGTLVDLGILDVMQIFGRAGRPQFDKYGEGTIITAHDKLSHYLTLLTQQNPIESQFLET
MADNLNAEVSLGTVTNVEEAVRWLSYTYLYIRMRANPLAYGINHKAYQMDPGLELYRKEL
VVMAARKLDKARMIRFEERTGYFASTDLGRTASHFYIKYNTMETFNELFNSQKTEADILS
IVSKAEEFEQVKVRDEEMEELEQMLCNYCELPAAGGVENGYGKINILLQTYIGRGEVDSF
SLISDLSYVAQNAARIVRALFEIALRKRWPAMTYRLLNLCKVIDKRLWGFAHPLRQFSIL
PHNVLARLEEKKLTVDKLKDMQKDEIGHMLHHVNIGLKVKQCVHQIPSILMEATIQPITR
TVLRVRLQITPDFQWHDQCHGSVGEPWWLWVEDPINDHIYHSEYLLLQKKQVVSGEPQQV
VFTIPIFEPMPSQYYIRAVSDRWLGSEAVCIINFQHLILPERHPPHTELLDLQPLPITAL
GNLEYESLYKFTHFNPIQTQIFHTLYHTDTNVLLGAPTGSGKTIAAELAMFRVFNQYPTS
KVVYIAPLKALVRERIEDWKIRIEEKLGKKVVELTGDVTPDMRAIAAADLIVTTPEKWDG
VSRSWQNRSYVQKVAILIIDEIHLLGEDRGPVLEVIVSRTNFISSHTNKTVRVVGLSTAL
ANARDLADWLGIGQVGLFNFRPSVRPVPLEVHIQGFPGQHYCPRMASMNKPVFQAIRSHS
PAKPVLIFVSSRRQTRLTALDLIAFLATEDDPKQWLHQDETQMTDIIATVRESNLKLTLA
FGIGMHHAGLHERDRKTVEELFVNCKIQILIATSTLAWGVNFPAHLVIVKGTEYYDGKTR
RYVDYPITDVLQMMGRAGRPQYDDQGKAVILVHDIKKDFYKKFLYEPFPVESSLLGVLSD
HLNAEIAAGTITSKQDAMDYITWTYFFRRLVMNPSYYSLDDISHETINKYLSNLVERSLR
DLECSYCMEIGEDDCTIEALTYGRISSYYYLKHQTVRMFKERLRAELPIQDILSVLTDAE
EYAELPVRHNEDQLNSELAQRLPLQVNPHSYDSAHTKTHLLLQAHFSRAQLPCSDYGTDT
KTVLDNAIRICQAMLDVAANEGWLVTALSICNLVQMIVQGRWLNDSSILTLPTIEQQHLY
LFSRWSSKGGKGGARGFHGPIEGLPELIATCEGRENTFAAIVGEELQPHQISQAWSFLSH
LPVVEVRLSVKGWWEGCGEQTERPLPAAGGKLRDERSWLDVHADQEYVLQVSLQRINTGQ
QRRKQDTKAQAPRFPKNKDEGWFLVLGEVERRELLAVKRIGYCRHRSTVSLAFYTPVKTG
KCIYTLYLMSDSYLGLDQQYDLHLNVTPACIAAQVNSEVTEAMGGMSVK
NT seq
6630 nt
NT seq
+upstream
nt +downstream
nt
atgtctccaccccggctcaccggcgctctgcgctccttctccactgtcagcaagcaggaa
gacttcactgaagaagtatatgatctgaagaccaagcgtctgaagaggcaggagctgttt
tccagagagggcctgacatggcagaagatagtccagttcttcacacagcacctagagaag
gcagagcagcaggctgcagcacaggagctgaagagcatcctacaggctgccaagcagata
gtggggacagagcatggccaggacaccattgagagtgctgctgtcttcctgtttgagacg
ttccacaacaaggaccatgtgggtcacgaggagactagggccatcaagcagatgtttggg
cccttcccctcctcggcagccgacgcctcctgtgctgctgtgtcccgggctgtggcccct
ctgggagagtcccaggtggaggagtttgttcgttcccagagctcctgtcgcgcccctcag
cgcggctcggccttcggacgcaacatcaccttctcctatgactgttacaccctggacccc
caggaggccctgccctgggcggggggccctgaggacgagacccctggtggaggcctggac
ttccacagcttcctcaacaaccaccaaggtcgcaggagtaatgggggagaggcggatgga
ggcaggctaagcccgggaggggctcagagctctggggatgggaccatcctgagaggggag
gtggagaagtacctgaacggaggcaacatgatctcctccagccctgaggaactgtgcacc
tccctgtttgagatgctggcctccaccaagagtgatgacgagctgcagaatgagctgttt
gaactgctgggcccagagggatttgagatgatctctgttctcctccagagaaggtcttcc
atcgtggactctctcctttccatccctgcagacaggatcaactacccgccagatggtagc
cgtggaggagaggggggcagcaagcccacgtacggctgtcaggtgaccatccagtcgggg
aaggagaaagagatgatgaagatgcaccggagggaggagaagagggagaggaagaggggg
gagagacgttgggatgacaccgaatcctcttccgacctctactttgaccccaaggagatg
agagctcagagagagcaggccctgctgacagcacgccggtctccagtgctgagcagagag
cgggtgtacgaacgcatccgctaccccaacgtctatgactgctacgccgaggccaccaag
acctccgccttcgtagggggagccaagctgatgttaccagaggggataaagagagagaat
aataagatgtatgaagaggtggagattcctcctagtgatcccatgtccatcggctttgag
gagaaacccatctacatctctgaactggatgagattggtcagttggtgtttaaggggatg
cagcgtctgaacaggatccagtccatagtgtttgagacagcctacaacaccaatgagaac
ctgctcatctgtgcccccaccggggccggcaagaccaacatcgccatgctgacagtcctc
catgagatcagacagcacctccaacctggaggggtcatcaagaaggatgagttcaagata
gtgtatgtagctcctatgaaggccctggcagcagagatgacgaactacttcagtaagcgg
ttggagccactgggcattgctgtcaaagagctcactggagacatgcagctaaccaaaggg
gagatcctgcgtacacagatgctggtgaccacccctgagaagtgggacgtggtgaccagg
aagagcgttggggacgtggccctgtcccagattgtaaagctcctcatcctggacgaggtg
catctgctacacgaggacagaggaccagttctggagagcctggtagccaggacactacga
caggtggagtcaacccagagtatgatccgtatcctgggtctgtcggccacgctgcccaac
tacctggacgtggcctccttcctccacgtcaacccctacatcggactcttctacttcgac
agccgcttcagacccgtgcccctcggacagagcttcgtcggcatcaagtccaccaacaag
atccagcagcttcatgatatggaggaggtttgctatgataaggttctggagcagatcaga
aatggacatcaggtgatggtgtttgtccacgctcgtaatgccacagtgaggacagccatg
gggctgatcgagatggctaagaaccggggagagtcttccttcttccagccagaccatgga
cctgactacggccagtgtgagaaatcaatccagcgttccaggaacaagcagatgaaggag
atgttcccagatggttttgggatccaccacgctgggatgctgcgtgctgaccgtagcctg
atggagagcatgttctccaggggttacctcaaggttctgtgctgtactgccacactggcc
tggggagtcaacctgcctgcacacgctgtcatcatcaagggcacccaaatctacgatgct
aagcgtggtaccctggtggacctgggcatcctggatgtgatgcagatcttcgggcgtgcc
gggcggcctcagtttgacaagtacggcgagggcaccatcatcacggcacatgacaagctg
agccactacctcaccctgctcacgcagcagaaccccatagagagccagttcctagagacc
atggctgacaacctcaacgctgaggtatcactagggactgtgactaacgtggaggaagca
gtgaggtggctgagttacacctacctgtacatccgcatgagagccaaccctctggcctac
gggatcaaccacaaggcctaccagatggacccaggtctggagctgtatcgtaaggaactg
gtggtgatggcagccaggaagctggacaaggccaggatgatccgcttcgaggagaggaca
ggatacttcgcctccactgacctgggcagaaccgccagtcacttctacatcaaatacaac
accatggagacattcaacgagctgttcaactcccagaagacagaggctgacatcctcagc
atcgtctccaaggccgaggagtttgaacaggtcaaggtgcgtgatgaggagatggaggaa
ctagagcagatgctgtgtaactactgtgagctgcctgctgcaggcggagtggagaacgga
tacggcaagatcaacatcttactgcagacctacattggccggggagaggtggacagcttc
tccctcatctcagacctgtcctacgtagcacagaacgcagctcgtatcgtcagggctctg
tttgagattgctctgaggaagcgctggcctgccatgacctaccgcctgctcaacctgtgt
aaagtgatagacaagcgtctgtggggcttcgctcatcccctgagacagttctccatcctg
cctcacaatgtgctggcccgtctggaggagaagaaactcaccgtggacaaactgaaagat
atgcagaaggacgagataggtcacatgcttcaccacgtgaacatcgggttgaaggtgaag
cagtgtgtccaccagatcccttccatactgatggaggccaccatccaaccaatcacacgc
accgtgctcagggtccgcctccagatcacccccgacttccagtggcacgaccagtgtcat
ggttcagtgggagagccctggtggctgtgggtggaggaccccatcaacgatcatatctac
cattcagagtacctgctcctacagaagaaacaggtggtgagtggggagccccaacaggtg
gtattcaccatccctatctttgagcccatgccctcccagtactacatcagagctgtgtca
gaccgctggctgggctcagaggctgtctgcatcatcaacttccaacacctcatcctgcct
gaaagacatcccccacatactgagctactggacctgcagccgttgcccatcaccgccctg
gggaacctggagtatgagagtctgtacaagttcacccacttcaatcccatccagacacag
atcttccacaccctctaccacacagacaccaacgtcctgctgggggcgccaacgggctcc
ggtaaaaccatcgctgccgagttggccatgttccgagtcttcaaccagtaccctacctcc
aaggtggtgtacattgcccctctgaaagctctggtcagggagaggattgaggactggaag
atcaggatagaggaaaaactggggaagaaggtcgtggagctgacaggcgatgtgactcca
gacatgcgggccatcgccgcagccgacctgatcgtgaccacaccggagaagtgggacggc
gtgagtcgctcctggcagaaccgcagctacgtccagaaagtagccattctcatcatcgac
gagatccacctgctaggggaggacagaggtcctgtgctggaggtcatagtgtccaggacc
aacttcatctcctcccacaccaacaagactgtccgcgtggtgggcctgtccacggccctg
gccaacgcacgagacctcgccgactggcttgggattggacaggtgggtttgtttaacttc
cgtccctctgtgcgtcccgtcccattggaggttcacatccaaggcttcccaggacagcac
tactgcccccgcatggccagcatgaacaagcctgtgttccaagcgattcgcagtcactct
ccagccaagcctgttctgatctttgtgtcgtcgcggcgacagactcgtctgacggctcta
gacctgatagccttcctggccaccgaggacgaccctaaacagtggctgcaccaggacgag
actcagatgacagacatcatcgccacggtgagggagtccaacctgaagctgacgttggcg
tttggtatcggcatgcaccacgctggactacacgagcgagacaggaagactgtggaggaa
ctgtttgtcaactgcaagatccagatactgatagccaccagtactctggcctggggagtc
aacttccctgcccatctggtcattgtcaaaggtactgagtactacgatgggaagaccaga
cgctacgtggactaccccatcacagacgtgctgcagatgatgggccgtgcaggccgccct
cagtatgacgaccagggcaaagctgtgatcctggtccacgacatcaagaaagacttctac
aagaagttcctctacgaacccttccctgttgagtccagtctcctgggtgtcctgtcagac
catctgaatgctgagatcgctgcagggaccatcacctctaaacaggatgctatggactat
atcacctggacgtacttcttccgcaggctggtcatgaaccccagttactacagcctggat
gacatcagccacgagaccatcaacaagtacctgtccaacctggtggagcggagtctccga
gacctggagtgttcctactgtatggagataggagaggatgattgcaccattgaggccctg
acgtacggtcgtatctcctcctactactacctgaagcaccagacagtcaggatgttcaaa
gagaggctgagggctgagctgcccatccaggacatcctctctgtcctcacggatgctgag
gagtacgcggagctgcccgtcaggcacaacgaggaccagctgaacagtgagctggctcag
cgtctccccctgcaggtcaacccccacagctacgacagcgcccacaccaagacccacctg
ctgctgcaggcccatttcagccgcgcccagctgccctgctccgactacggcactgacacc
aagaccgtgctggacaacgccatacgcatctgtcaggccatgctggatgtagcagccaat
gagggttggctggtgactgctctcagcatctgtaacctggtgcagatgattgttcagggc
aggtggctcaatgactcctctatactgaccctacctaccatagagcagcagcacctctac
ctgttcagcaggtggagctccaagggagggaagggcggggccaggggcttccacggacca
atagaagggctccctgagctgattgccacctgcgaggggcgggagaacaccttcgctgcc
atcgtgggagaggagcttcagccccatcagatctcccaggcctggtcgttcctcagccat
ctgccggtggtggaggtgcgtctgagtgtgaagggttggtgggaggggtgtggggagcag
acagagcgccccctccctgcggccgggggaaagctcagagacgaaagaagctggctggac
gtccacgctgaccaggagtacgtcctgcaggtctccctgcagcgcatcaacaccggccag
cagaggaggaagcaggacactaaggcccaggcccccaggttccccaagaataaggatgag
ggctggtttctggttctaggagaggtggagcgcagagagctactggccgtcaaacgcatc
ggatactgccgacaccgcagcaccgtttccctggccttctacacccccgtgaagaccgga
aagtgtatctacacactatacttgatgagtgacagttacctgggtctggaccagcagtat
gacctccacctcaacgtgacccctgcctgcatcgctgcccaggtcaacagtgaagtcact
gaggccatgggaggcatgtccgtcaagtga
DBGET
integrated database retrieval system
