Oncorhynchus keta (chum salmon): 118367678
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Entry
118367678 CDS
T09424
Name
(RefSeq) trichohyalin-like
KO
K20684
Rho guanine nucleotide exchange factor 5
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118367678
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118367678
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Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SH3_1
SH3_2
SH3_9
PH
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
118367678
NCBI-ProteinID:
XP_052350889
LinkDB
All DBs
Position
34:76071024..76090732
Genome browser
AA seq
2005 aa
AA seq
DB search
MGTKRPSLTPFDTFDPSNQSASYQNPQPISQICHETSPRPGTVVRTDRDRERIREEEWRR
EREMERLKDKTRNRRKEMESGPRERNREECALISRGREEEREWRERERGGAGERRANGRP
TSNLEIRNHRDREKERKKGDTFPRMVKHSEERDRRMSAFVEEDVGKEGMRQLERPKGTEM
DDWERERETAAKIQRYRDAERDFQSHRERERERIRAQEDREKNGGKPMEDKTVRRRERAR
EAEPDFRERRRERDSKGNDLWSKRERYMDGERERSKLRQGEREDGRREGDSQIYSDREGR
GGRREGNTEGQRDTRSEGDSDGEKRKERVRDDNRRELKHLHSKSDGGTEGNAAWDRVREK
EKERQKWRGGEIYRERDGRRDAYRQRVREGDRDGRRDAYRQRVREGDRDGKSDMERYRER
ERRKVREVERERDEVREGGRREDRPRKRRDLEKVRVGTQPNVTGERGKWMDGERFRERER
YSKGEDEERRCREKRDRETDLKREGGADGASPLSETDPKREGEADGASRSLSETAPRVPP
RVQSSGEWSSDIERERQWRRGGESHEEKESEGEKDVDRGQRDCSERERPDRVRGREEGKE
ETIPKRPEQRRMWLLPQKVRYNKDSSLEDDVIERERDRHTNRWRERSEEEDRSVEQRTGR
DKERKTEGEGQEDRSVEQRKSIDEEREAEREGGRERYLERGLNVDEDDETEAWRSYSRGE
EHQTYSDGEREERWQRDRETERENVTDNTEGDREEEGGRDRYTLFESDGGSDREWEGGRD
RIPSSEDGFITVSSGGEEEFEDCKEFLEVGVAIHVTRQPVSFQGSEGEMERGGGRRHERE
RERAEERTEQKDDAVVGEVNDGKGKKQPTYVFCVIGQTLPRSKPNQTAVLGDMESERTNQ
NPGYGHRDSGDITHLPHENPSRDGDQGAEDERKIVRDEIHVPKEERTDTEESSIVDVSHT
TLERESGERLKVMEENPYAEIERRRNSETEKLLKEWRERHEEYTETRERDPTDRRRTEPE
IGPSSHPSGEYHHHGIPVVDQATSDQNNPVVMSPEEAVAIQICIRGAWSTEEEAKRHSQA
SHMKWAKNVLSEILGSSEEPALGNPQPESQGSQEVSQTARGTEKVEEELEEEKDETLEGG
GASPVYATVQKRKKHGRKSVEERLAELEAEPGKLEDERGTGEKLADVHAEAFTAMLGDGK
PIDMHAALTLHNTHGDTPTDTQGEEVEGNNVCADRQTDSHIHIQVEMVTEVEGEMEKGVE
VGDEVHILDAEKEANSQKEEDLFLSVSNTLYKPTSCPSLIYNPDSEQPITTIEEKTEEEG
DKERTVGQGEENSVVERKQERRIEDGTEDRGKVGEATEERKVEREEEKRVGGEEERMREG
KEDSKKTGGGGVKSTCSFQDLGTDVRYRRRGFRKATERRNEEEEEGRGDARDRRTRIFQA
SDDEEEEVSFNWGDVDLRNVTDTIRMARRNSKFYNSQLYQEYSETAQNREILSQSCSDAL
SIYEELPGPLAPSLPPARRPLPCLPPVIHPHSLSHSGSTSSGTSAKFLPVPQPPQPPPAR
PSSPRLSISLTQSPSLWQEIPEVRNSAAFGELTNDQRRLQEVQFEVVTSEASYCRSLDIV
VDHFVKSKQLGELLTTQDRSWLFSRLADVRAISHSFLSKLEERVESDMMHFTVCDIIVRH
CQRFKKVYVPYLTNQSYQDATYQRLMDENHGFRRVVEKLERSPVCQRLPLRSFLILPFQR
ITRIKLLVQNIVKRTAQGTEEEVQAIKAMKLLERLIQESNDSITQMKSIESLVSLSARVD
FECRTLPLVSQSRRLVREGPVTEMMDFSLKETERSVYLHLFNDYLLLSLNKEGGRFTVID
HAPVSELRAENCRVKLHSLEKNLFRLHLNKKALLLSTDTQGDKLRWISAVSRPHPVIDYS
AEQDFTQMQCVRAFVAHQPDELSLEKAEVILVHQQSSDGWVEGTRLSDRHRGWTPESHLE
TIASLRVRQRNLQDALKITTATAAV
NT seq
6018 nt
NT seq
+upstream
nt +downstream
nt
atggggaccaaacgtcccagtctgactccctttgatacatttgatccatccaatcaaagc
gcttcctaccagaaccctcagccaatcagccagatctgccacgaaacaagtccccgacct
ggaactgtggtccggacagacagagacagggagaggatccgagaggaggaatggaggaga
gaaagagaaatggagagactgaaggacaaaacaagaaatagaagaaaagagatggaatcc
ggaccaagagagaggaacagagaggagtgtgccctcatatccagaggaagggaggaggaa
agggaatggagagagagagaaagggggggagcgggagagagacgtgccaatggaagacct
acttcaaatctagagattaggaaccacagagacagagaaaaggagagaaagaaaggagac
acgtttcctagaatggtaaaacatagcgaagagagagacagaagaatgagtgcatttgtg
gaggaagatgtggggaaagaaggaatgagacaattggagagaccgaagggaacagagatg
gacgactgggagagagaacgagagacagcagcaaagatacagcggtatcgagatgcagag
agggacttccaaagccacagagagagggagagggagagaatcagggcacaggaggacaga
gagaagaatggaggaaagcccatggaggataagaccgtgagacggagggagagagcgagg
gaagcggagccagatttcagagagaggagaagagagagggattcaaagggtaatgaccta
tggagcaaaagagagaggtatatggatggagagagagagaggtcaaaactccggcaggga
gaaagagaggatggaagaagagagggagattcacagatctattcggacagagagggcagg
ggtggaaggagggaaggaaataccgagggacagagggacaccaggagtgagggagacagt
gatggagagaagaggaaagagagagtgagagatgacaacagaagagaactgaaacatctg
cacagtaaaagtgatgggggcactgaggggaacgcagcatgggatagagtgagggagaaa
gagaaggagagacagaaatggagagggggggagatatacagagagagggatggaaggaga
gatgcttatagacagagagttagggaaggggacagggatggaaggagagatgcttataga
cagagagtgagggaaggggacagggatggaaagagtgacatggagagatacagagagagg
gaaaggagaaaagtgagggaagtggagagagagagggatgaggtgagagaagggggcagg
cgagaggacagaccaaggaaaaggagggacctagagaaagtgagggtgggaacacagccc
aatgtaacaggagagagagggaagtggatggatggagagagattcagagagagggagaga
tattccaagggggaggatgaagagaggaggtgcagggagaagagggacagagagacagat
ctcaaaagggagggaggagcagacggagctagtccgctgagcgagacagatcccaaaagg
gagggagaagcagatggagctagtcgttcgctgagcgagacagccccaagggtgccacca
cgagtccagagcagcggagaatggagcagtgacatagagagggaaagacaatggagaaga
ggaggagaaagtcatgaagagaaggagtcagagggagagaaggatgtggacagggggcag
agagactgtagtgaaagagagagaccagatagagtgagggggagagaagaaggaaaggaa
gagacgataccaaagcgccctgagcagaggaggatgtggttattaccacagaaggtcaga
tataacaaagactcctctttagaggatgatgttatagagcgagaaagagataggcacact
aacagatggagagagagaagtgaagaagaggacagatctgtggaacaaaggacaggcaga
gataaagagaggaagacagagggagaaggacaagaggacaggtcggtggaacaaagaaag
tccatagacgaagagagagaagctgagagggagggagggagggagaggtatttggagaga
gggttaaatgtagatgaagacgatgagacagaagcctggaggagttatagcagaggagag
gaacaccagacttacagtgatggagagagagaggaacgctggcagagggacagggagacg
gagagagagaatgtgacagataacacagagggtgacagagaggaagaaggaggaagagat
agatatacactcttcgagagcgatggaggaagtgatagagagtgggaaggagggagggat
agaatcccttcctctgaggacggctttatcactgtgtccagtggtggagaagaggagttt
gaggactgcaaggaattcttggaagttggggttgctattcatgttaccaggcaacctgtt
agctttcaggggagcgagggagagatggagagaggtggagggagaagacatgaaagagag
agagaaagagcagaagagaggacagagcaaaaagatgatgcagtggtgggagaggtgaat
gacggaaaggggaagaagcaacccacctatgtattctgtgtgattggacaaacactgccc
aggtctaaacccaatcagacagcagtcttgggtgacatggaatcagagcggaccaatcaa
aatcctggatatggtcatagggacagtggtgacatcacacacctccctcatgagaaccct
tccagagatggagaccaaggggcagaggatgagagaaaaatagtgagggatgagatccat
gtgccaaaggaggagagaacagacacagaagagagctccatagtggacgtcagtcacaca
accctagaacgagagagcggagaacgactgaaggtcatggaggagaacccatacgctgag
atagagcgaaggaggaactctgagactgaaaagctcctcaaagagtggagagaaagacat
gaagagtacacagaaacaagagagagggacccaacagacaggaggaggacagaaccagag
ataggtccatcttcacatcccagtggagagtaccaccaccatgggatccctgtagttgac
caagccacctctgaccagaataaccctgtagtgatgagcccagaggaagctgtggccatc
caaatctgtataaggggagcctggagcacagaagaggaggccaagcgccactcccaggcc
tcacacatgaagtgggccaagaacgtattgagcgagatccttggcagctcggaggaacca
gccctcggcaacccccagccagagtcacagggaagtcaagaggtcagccagactgcgaga
gggaccgagaaggtagaagaggagctagaggaagaaaaggatgagacgctagagggggga
ggagcctcacccgtctacgccacggttcagaagaggaagaagcatgggaggaagtcggtg
gaggagaggttggctgaactggaggcagagccagggaagctggaggatgagagaggtaca
ggggagaaactagcagacgtgcatgctgaggctttcacagctatgcttggtgatggcaaa
cccatagacatgcatgctgccctgaccctacacaatactcatggtgacacacctacagac
acacagggagaggaggtggagggtaacaatgtgtgtgcggacagacaaacagacagtcat
atacatatccaggtagagatggtgacagaggttgagggtgagatggagaaaggggtcgaa
gttggggacgaggttcatatactggatgcagagaaagaagcgaattcccagaaagaggaa
gatctgtttctctctgtgagcaacaccctgtacaaaccaaccagctgccccagccttata
tacaaccctgattcagaacaacctatcaccaccatagaggaaaagacagaggaagaaggg
gataaagagaggactgtgggacagggggaagagaatagtgtggtagagaggaagcaggaa
aggaggatagaagatgggaccgaggacagggggaaagtgggagaggcgactgaggagagg
aaagtggaaagggaggaggagaagagggtaggaggggaagaggagaggatgagggagggc
aaggaagatagtaaaaaaacggggggagggggggtgaagagcacttgtagcttccaagat
ttgggcaccgatgttcggtataggaggcgggggttccgcaaggcaacagaaagaagaaac
gaggaagaagaagaaggaagaggagatgcgagggatcgcagaacaagaatcttccaggcg
tcagatgatgaggaggaggaggtgagcttcaactggggagacgtggacctgaggaatgtc
acagataccatcagaatggctaggaggaactccaaattttacaattcccagctctaccag
gagtacagtgagacggctcagaacagggagatcctcagtcagtcttgctctgacgccctc
tccatctacgaggagctccctggccccctggccccctcgctccctccggctcgcaggccc
ttaccctgtctccccccagtcatccacccccactcactgtcccactctggctctacctcc
agtggcaccagtgccaagttcctacccgtaccacagccgccccagccccccccggccagg
ccttcctctccccgcctctccatctccctcacccagtcccccagcctatggcaagagatc
cctgaggtcaggaacagtgctgcgtttggggagctgactaacgaccagagacgcctgcag
gaggtgcagtttgaggttgtaacttcagaagcgtcgtactgtcgtagtctggatattgtg
gtggatcactttgtcaagtctaagcagctcggggagctgttgactactcaggacaggagc
tggctgttctccaggctggctgatgtccgagccatcagccacagttttctgtcgaagctg
gaagagagggtagaatctgatatgatgcacttcaccgtgtgtgacatcatcgttcgccac
tgtcaacgcttcaagaaggtctacgtgccctacctcaccaaccaatcatatcaggatgcc
acttaccagagactcatggatgagaaccatgggttcaggcgggtagtggagaagttggaa
cgcagtccagtgtgtcagcgccttcctcttcgctccttcctcatcctcccctttcagaga
atcacacgaatcaaactccttgtgcagaacattgtgaagagaacagcccaaggcacagag
gaggaggtccaggccattaaagctatgaagctactggagaggttgatccaggagagcaat
gacagtattactcagatgaagagcattgagtcgcttgtctctctcagtgccagagtggac
tttgaatgcaggactctccccctggtcagtcagtctcgtagactggtgagagagggaccg
gtgactgagatgatggatttctctctgaaggagacagagaggagtgtctaccttcacctc
ttcaatgactacttgctgctgtcgctgaacaaagaagggggcaggttcacggtgatagac
catgctccggtttcagaactacgagctgagaactgtcgggtcaaactgcactctctagag
aagaaccttttccgcctccaccttaacaagaaagccctgctacttagcaccgacacacaa
ggtgataaactgcgttggatctcagctgtctccaggccccatcctgttattgactattct
gcagaacaagacttcacacagatgcagtgcgtccgagccttcgttgcccaccaaccagat
gagctgtccttggagaaggctgaggtcattctcgtccaccagcagagcagcgacggttgg
gtggaggggaccaggttgtcagacagacacagaggatggactcctgagtcccatttggaa
accatagccagcctcagggtccgacagcgcaacctgcaggatgctctaaagattaccaca
gccacggctgcagtatga
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integrated database retrieval system
