Oncorhynchus keta (chum salmon): 118367906
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Entry
118367906 CDS
T09424
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K14835
25S rRNA (cytosine2870-C5)-methyltransferase [EC:
2.1.1.310
]
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
oke03009
]
118367906
Enzymes [BR:
oke01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.310 25S rRNA (cytosine2870-C5)-methyltransferase
118367906
Ribosome biogenesis [BR:
oke03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
118367906
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
Methyltr_RsmF_N
Methyltransf_31
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
118367906
NCBI-ProteinID:
XP_052350831
LinkDB
All DBs
Position
34:complement(75757939..75766501)
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AA seq
748 aa
AA seq
DB search
MGRKLDPTTYVKKGPGRKSRKQKGAETELAKFLTDEDTAPKRLSSRSRKRAGKRAQVTKK
PKESTEKEEPKKGFTDENSEWLKPAKRKREVGQSDNEDDSDSQWEQEEDEGQEGGENNKG
KKLLIEGDGDDDDLVDDYGALEDSSEGEGEVDGDGEELLPIERAARKQKKLQEAMGQESD
DDDDNENKGKTGDEDMDEDDTVQANLDDMDKFILPGAEEIAKEGVLLVDLQTIHQRIKDN
VDVLSHFATKREEGKERTEYLSLLKKDLSTYYSYNNFLIDKLLDIFPVSELIDFLEANEI
QRPVTIRTNTLKTRRRDLAQALINRGVNLDPLGKWSKVGLVIFDSSVPIGATPEYLAGHY
MLQGASSFLPVMALSPQEGETVLDMSSAPGGKTTYMAQLMRNTGVIVANDASADRLKSVV
GNIHRLGVTNSMICNYDGRQFPKVMGGFDRVLLDAPCSGTGVISKDPAVKTSKDESDIQR
LAHLQKELILAAIDSVNAESPSGGYLVYCTCSIMVEENEWVVDYALKKRNVKLVQTGLDF
GKEGFTRFKERRFHPSLKLSRRFYPHSHNMDGFFVAKLKKFSNMVPTTAVEKDGEEETKP
SEAVEVTADSSDEDGPSKAGSKNKSKKQKPVPGKPAMSQKATANGKPDKSIGKKTTNLST
LKKNEKPTGPKKAKIAKMDGGTVKVDGEHKKSNTVKTEGETTKQSKEGSRFEKKGDKQRK
SPMQSKKRMGKNKFNKLKKLLKKEEVGQ
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgggcaggaagttggatcccaccacgtatgtgaagaaggggccggggcggaagtccagg
aagcagaaaggagcagagactgagctggccaagttcttaacggatgaggatactgcacca
aaacgactgtcaagcaggtccaggaaaagagctgggaagcgagctcaagtgaccaaaaag
cccaaggaaagcactgagaaggaggagccaaaaaaaggattcacagatgaaaacagtgaa
tggctgaagccagcaaagaggaagcgtgaggtcggtcaatcagataacgaggacgacagt
gacagccaatgggagcaggaagaggacgagggacaagagggaggggagaacaataaaggg
aaaaaactgctaattgaaggagacggtgacgatgatgacctggttgatgactacggtgca
ttggaggacagcagtgaaggagagggagaagtagatggtgatggagaggagctgctcccc
atcgagcgagctgccaggaagcagaagaagctgcaggaagcaatgggccaggagagtgat
gatgatgatgataatgaaaataaggggaagactggagatgaagacatggatgaagatgac
acggtacaggctaatttagatgatatggacaaattcatactacctggagcagaggagatt
gcaaaagagggtgttttgcttgtagacctgcagaccatccaccagagaataaaggacaac
gtggatgttctctctcactttgctaccaagagggaggaggggaaagagagaacagagtac
ctctctctcctcaaaaaggatctttccacttactacagctacaacaatttcctcatagac
aaactgctggatatcttcccagtgtcagagctgattgatttcctggaggccaatgaaatt
cagcgacctgtcaccattcggaccaatacactgaagacaaggaggagggacttggctcag
gccctgatcaacagaggggtgaatctggatcctctggggaagtggtctaaagtgggcctg
gtcattttcgactcctcggtacccataggtgcgaccccagagtacctagcgggtcactac
atgctgcagggagcctccagcttcctgcctgtcatggctctctctccccaggagggggag
actgtgctcgacatgagctcagctcccgggggaaagaccacctatatggcccagttgatg
aggaacacaggtgtgattgtggccaatgatgccagtgctgacagactgaagagtgtggtg
ggcaacatccaccgtctgggagtcaccaactcaatgatctgtaactacgacgggaggcag
ttccccaaggtcatgggggggtttgacagagtgctgcttgatgctccctgctcaggcaca
ggagtaatctccaaagaccctgctgtgaagaccagtaaagacgagtctgacatccagcgg
ttggcccacctgcagaaggagctcatcctggcggccatcgactcggtcaacgctgagtct
ccctctggaggctatctggtgtactgcacatgctctataatggtggaggagaacgagtgg
gtagtggactacgctctcaagaaaagaaacgtcaaactcgtccagactggactggacttt
ggcaaagaaggtttcaccagattcaaagagagacgattccatccctctctgaaactctca
cgccggttctatcctcattcccacaacatggacggtttctttgtggccaagctgaaaaag
ttctccaacatggtcccaaccacagcagttgaaaaagacggagaagaggaaaccaagcca
tctgaggcagtagaggttacagctgattcctctgatgaggacggaccatctaaagcaggg
tctaagaacaagtccaagaagcagaagccagtccctggcaagccagctatgtcacagaag
gccacagccaacgggaagccagacaaaagcataggcaagaaaacaacaaacctaagcacc
ttgaaaaagaatgagaaaccaactgggccgaaaaaggcaaagatcgctaagatggatggt
gggactgtgaaagtggatggagagcacaagaagtccaacacagtcaaaacagaaggggaa
acgaccaaacagtcaaaggaagggagcaggtttgagaaaaagggcgataaacagaggaaa
tcccccatgcagagcaagaagagaatggggaagaacaaattcaataagttgaagaagctg
ctgaaaaaagaagaggttggacaatga
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