Oncorhynchus keta (chum salmon): 118368189
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Entry
118368189 CDS
T09424
Symbol
rrh
Name
(RefSeq) visual pigment-like receptor peropsin
KO
K04253
visual pigment-like receptor peropsin
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
oke04030
]
118368189 (rrh)
G protein-coupled receptors [BR:
oke04030
]
Rhodopsin family
Vision
Opsin
118368189 (rrh)
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7tm_2
Motif
Other DBs
NCBI-GeneID:
118368189
NCBI-ProteinID:
XP_035607939
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Position
35:26343287..26348491
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AA seq
334 aa
AA seq
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MESGVNTTGEVIPYGGKSAFSQLEHNIVAAYLITAGVISLASNIVVLVMFVKFKELRNAT
NAIIINLAFTDIGVAGIGYPMSAASDLHGSWKFGYTGCQIYAALNIFFGMASIGLLTVVA
IDRYLTICRPDIGQKMTTRSYTLLILAAWLNAVFWSSMPVVGWAGYAPDPTGATCTINWR
NNDAGFVSYTMAVIAVNFLMPLSMMFYCYYSVSVTMKRYKASNRLDSINMDWSDQMDVTK
MSIVMIVMFLVAWSPYSIVCLWASFGDPRKIPAPMAIIGPLFAKSSTFYNPCIYVIANKK
FRRAITGMLRCQTRQRITINNQVPMTISQLPLTQ
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggagtctggagtcaacaccacaggggaggtcattccctacggaggaaaaagtgccttt
tcacaattggagcacaatatagtggcggcataccttatcactgcaggtgtcatcagtttg
gccagcaacattgtggtactggtgatgtttgtcaagttcaaggaactgcgaaatgccacc
aatgccatcatcatcaacctggccttcactgacattggagtggctggcattggctatccc
atgtctgctgcctctgacctccacgggagctggaagtttggctacactggatgtcagatc
tatgcagctctgaacatcttctttgggatggccagtattggactgctgacagtggtggcc
attgaccgctacctaaccatctgtagacctgacatagggcagaagatgaccacccgctca
tacacactcctcattctggctgcatggctcaacgcagttttttggtcgtccatgcccgtg
gtgggttgggccggctatgcccctgacccaactggtgccacctgcaccatcaactggaga
aataatgatgcgggctttgtctcctacaccatggcagtaatcgctgtgaacttcctcatg
cctttgtcaatgatgttctactgctactacagtgtgtctgtcaccatgaagagatacaaa
gccagcaaccgcttggacagcattaacatggactggtcagaccagatggatgtgactaag
atgtcgatagtgatgattgtcatgttcctggtggcgtggtcgccgtactccatagtgtgc
ctatgggcgtcctttggggaccccagaaagattcctgcccccatggctatcattggtcct
ctctttgccaagtcctccaccttctacaacccctgcatctacgttattgccaacaaaaag
ttcagaagagcgatcacaggaatgctccgatgtcaaacccgacaacggatcaccatcaac
aaccaggttcccatgacgatttcccagctccctttgacccaatga
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