Oncorhynchus keta (chum salmon): 118368229
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Entry
118368229 CDS
T09424
Symbol
hif1aa
Name
(RefSeq) hypoxia inducible factor 1 subunit alpha a isoform X1
KO
K08268
hypoxia-inducible factor 1 alpha
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke04137
Mitophagy - animal
oke04140
Autophagy - animal
oke04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
118368229 (hif1aa)
04137 Mitophagy - animal
118368229 (hif1aa)
04148 Efferocytosis
118368229 (hif1aa)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118368229 (hif1aa)
Transcription factors [BR:
oke03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
118368229 (hif1aa)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
bHLH_HIF1A
PAS_3
HIF-1a_CTAD
PAS_11
HIF-1
PAS
PAS_4
PAS_9
HLH
Motif
Other DBs
NCBI-GeneID:
118368229
NCBI-ProteinID:
XP_035608047
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Position
35:complement(27752471..27784621)
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AA seq
758 aa
AA seq
DB search
MNTVVPEKKSRVSSERRKEKSRDAARYRRGKESEVFYELAQELPLPHGVTSNLDKASIMR
LAISYLHMRKLLSTEDKAVEKEQEESEMDSQLNGSYLKALEGFLMVLSKDGDMIYLSENV
NKCLGLAQFDLTGLSVFEYTHPCDHEELREILVHRTGTSKKSKGPNTERSFFLRMKCTLT
SRGRTVNVKSSTWKVLHCSGHVRVHEAPTEQSPIGHKEPPVSYLVLVCDPIPHPSNIEAP
LDTKTFLSRHTLDMKFTYCDERITELMGYDPEDLINRSVYEYYHALDADYLTKTHYNLLV
KGQVSTGQYRMLAKIGGFVWVETQATVIYNNKNSQPQCVVSVNFVLSGIEEEKMVLSLEQ
TEDMRSVKKELVEEEEDEGSEAEVSPVLLKEEKVDVIKLFTQAMEAQPLASLYDRLKEEP
EALTLLAPAAGDTIISLDFGSPDSDTLLKEVPLFNDVMLPSTSDKLALPHSMLPPNEQPL
IPSASVDTKADPDSFSTPGSHSSTEPDSPLNFCFPMDSDISAALKLDLVERLFAIDTEPK
TPFTSQGMEDLDLEMLAPYIPMDDDFQLRTLSLEEPPSCDPAQPLVSSSLCSPLHLTQDV
HSYPDSPFSAPRSRTASPAPELAASPCPASLLTMRAPQMDREMSLRTLATQNSQRKRKLS
LSQAVGIVNGALLQDPPGPGKQLKVSELGSSEAPSNRTILLLPTDLASCLLGISSEGSGS
PFTLPQLTRYDCEVNAPVVGRQHLLQGEDLLCALDQVN
NT seq
2277 nt
NT seq
+upstream
nt +downstream
nt
atgaacacagttgtcccagaaaagaaaagcagggtgagctcggagcggaggaaggagaag
tcccgggatgcagcgcgataccggaggggcaaggagtcagaggtgttctacgagctggcc
caggagctgcccctgccccacggtgtcacctccaacctagacaaggcttctatcatgaga
ctggctatcagctacctgcacatgaggaaactgctgagcacagaagataaggcagtagag
aaggagcaggaggagagtgagatggactcccagctgaatggctcctatctgaaggctctg
gagggcttcctcatggtgctgtctaaagacggggacatgatctatctctctgaaaatgtc
aacaagtgcttgggtctggcacagtttgacctgacaggacttagtgtgtttgagtacaca
cacccctgtgaccacgaggagctaagggagatcctggtacacagaacagggacctctaaa
aagtccaagggaccaaacacagagcgcagcttcttcctgcggatgaaatgtaccctcacc
agcagggggcgcactgtcaatgtcaaatcatccacttggaaggttctccactgctcaggc
catgtgcgagtccatgaagccccaactgagcagagccccattgggcacaaggagccgccc
gtctcctacctggtgctagtctgtgaccccatcccccacccctccaacatcgaggcgcca
ttggacaccaagaccttcctcagccgccacacactggacatgaagttcacctattgtgac
gagaggatcactgagctgatgggctatgatccagaggacctgataaatcgctctgtgtat
gagtactaccatgccttggacgcagactacctcactaagacccattacaacttgcttgtt
aagggccaggtgagcacaggccagtaccgcatgctggctaagataggtggctttgtatgg
gtggagactcaggccactgttatctacaacaacaagaactcccagccccagtgtgttgtc
tctgtcaactttgtgctcagtggcattgaagaggagaagatggtgctgtctctagagcag
actgaggacatgaggtctgtaaagaaggagctggtggaggaggaagaggacgagggctca
gaggcagaggtgtcccctgtgctcctgaaggaggagaaggtggatgtgattaagctgttc
acccaggcaatggaggcccagccactggcgagcctgtatgacagattgaaggaggaacca
gaggccctcacccttctggccccggccgcaggggacaccatcatctccctggacttcggc
agccccgactctgacaccctgctgaaggaggtgcctctcttcaacgatgtgatgctgccc
tccaccagtgacaagctggccctgcctcactctatgctgccccccaatgagcagcccctg
atccccagtgcctcagtggacaccaaggcagatccagactccttcagcaccccaggcagc
cacagctcaactgagcctgacagcccgctgaacttctgttttccaatggactctgacatc
agtgctgcgctgaaactggacctggtggaaagactgtttgccatcgacacagaacccaag
acacctttcacctcacagggcatggaggatctggacctggagatgttggctccatacatc
cccatggatgatgacttccagctgcgcaccctgtccctagaggagcccccatcgtgtgac
ccagcccagcccctggtgagctcttctctgtgctctcctctgcacctcacccaggatgtc
cacagctacccggattccccctttagtgccccaagaagccggacagcttccccagccccg
gagctggcagctagcccttgccctgcctccttactcaccatgagggcgcctcagatggac
agagagatgtccctcaggacactggccacccagaactcacagcgcaagagaaagttgtct
ctgtctcaggctgtcggaatagtaaatggggcattgctccaggaccctcctgggccaggt
aaacagctcaaggtatctgagctgggcagctctgaggctccctccaacaggaccatactg
ctcctacctacagacctggcaagctgcctgcttggcatctcctcggagggcagcggctca
cccttcacccttccacagctgacccggtatgactgtgaggttaatgcccccgtggtgggt
cgccagcacctgctgcagggcgaggatctgctgtgtgccctggaccaagtcaactga
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