Oncorhynchus keta (chum salmon): 118368246
Help
Entry
118368246 CDS
T09424
Name
(RefSeq) transforming acidic coiled-coil-containing protein 3-like isoform X1
KO
K14283
transforming acidic coiled-coil-containing protein 3
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118368246
03036 Chromosome and associated proteins [BR:
oke03036
]
118368246
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
118368246
mRNA cycle factors
P-body specific factors
118368246
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Sister chromatid separation proteins
TACC proteins
118368246
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TACC_C
Lzipper-MIP1
DUF5063
TetR_C_46
Motif
Other DBs
NCBI-GeneID:
118368246
NCBI-ProteinID:
XP_052352789
LinkDB
All DBs
Position
35:28264542..28274885
Genome browser
AA seq
1211 aa
AA seq
DB search
MSSTAVNDENRGVCTGRKQSSSETICDIFSFDQPTGRPSILRQSQAENLSNKTIAKGGKV
CFQTPRRDPLTKRIVSPTKSLKIESLDDCSKALDTIQFTSPEEVVPLETNGLVDVAKSDF
TDVSSYPDDDMQNKGGCQLYFDNLDAINPFQGSTKMVLCPARLSELVETPKAEEQRERNV
IEAVSDRNEKALDNTLPFMPSVENSLADFSADMCSTDSRVITMMDPADKLSNSGEEETVP
SVNLDPDQAVAIISTAEETALPPKGTYEFDFDNLDSVNPFQTGGSKLQNSPMLGRKQPCD
DPEKVEVEEPAVKEMEPAAMLEVVHSVLEAPVQTEIKPIAPKETSKPAEDAVAITSTAEE
TALPPKGTYEFDFDDLDSVNPFQTGGSKLQNSPMLGRKQPCDDPEKVEVEEPAVKEMEPA
AMLEVVHSVLEAPVQTEIKPIAPKETSKPAEDAVAITSTAEETALPPKGTYEFDFDNLDS
VNPFQTGGSKLQNSPVLGRKRPCDDPQKVEVEEPAVKEMEPAAMLEVVHSVLEAPVQTEI
KPIAPKETSKPAEDAVAITSTAEETALPPKGTYEFDFDNLDSVNPFQTGGSKLQNSPVLG
RKRPCDDPQKVEVEEPAAMLEVVQPVLEAPVQPEINPIAQLSTAPEETSKPAEESIPQPS
AAPSKDGAVKLEFNFDDGVVNPPPKKFDKRPVLKPTWKKAVPTEKKEPAQSKESPVKQLV
NTDNEIPLPKGKYNFDFNKFDPSVNPFGTNVKMTESTVCKVKSSPDAKAPTSVRVTVYPD
KVAEPVQQETAPSLIVSIAGYEPDRSAVKGIDNIPQNLTLQMDSSEVQDPSSGKEQEPPT
KPDQPSLSTPEPLELCQFEQTPQNDMSEFNEDFVPGTTFMANDFDRQMDYLEQFGSSTFK
ESALRKQSLYLKFDPLMRESPNKSGVRAGLNNLSRPAPFASRVETQKIGTDEVNGLKSVN
PKLLHDLPPVQVVGPRTLVTNSPVLENLVPTLPQPANPDGNIIEVLKYSQQDMNVAIAKI
QIQAKENADEWKSKHDTLSQDNHEMGKIMSAFEATIAQILADKQREMEKAQADITKVLQE
KEQLSEDLNAMERSFSDLFKRLDKYKEVIEGYIKNEEMLKKCAQDYLARIKEEEQRYQTL
KAHAEQKISLANGEIAEVRSKLKSEVAALQAQLRREQLKAQSLEKSLDQKVKETEELTNL
CDELIAKVQKG
NT seq
3636 nt
NT seq
+upstream
nt +downstream
nt
atgagttctactgctgtaaacgatgagaatcgtggggtctgcactggaagaaagcagagc
agttcagagactatttgtgacatcttttcttttgatcagccgactgggaggccctccatt
cttcgccagtctcaggcagagaacctgtcaaacaaaactatagcaaagggtggaaaggtt
tgttttcagactccaagaagagaccctctcactaagagaatagtatcaccaacaaagtcc
cttaagatagaaagcctggatgactgtagtaaagccctggatacaatacagtttacatca
cccgaagaggtggtacctctagaaaccaatgggcttgttgatgtagcaaaatcagacttc
acagatgtgtcgtcctatcctgatgatgatatgcagaataaaggaggttgtcagctgtat
tttgacaaccttgatgccatcaatcccttccaagggtctactaaaatggtcctctgccca
gcaaggctcagtgagctagttgaaactcccaaggctgaagaacagcgtgaacgtaatgtc
attgaagcagtttctgacaggaatgaaaaggcactggataatacactcccgttcatgcca
tcagtggaaaattctcttgctgacttctcagccgatatgtgctcaacagatagcagggtg
attaccatgatggacccagccgacaagttatccaactctggtgaggaagaaactgtacca
tcagttaacctcgacccagatcaagctgtggctatcatctctacagccgaggagactgct
ctgccaccaaaaggtacatatgaatttgattttgacaaccttgattcagtcaaccctttc
caaacgggaggctccaaattgcagaattcccctatgcttggaaggaagcagccatgcgat
gaccctgaaaaggtggaagttgaagagcctgcagtaaaggaaatggaaccagcagccatg
cttgaggtggttcattctgtcctagaagcacctgtccagacagaaattaaacctattgca
ccgaaggagacttccaagccagctgaagatgctgtggccatcacctctacagccgaggag
actgctctgccgccaaaaggtacatatgaatttgattttgacgaccttgattcagtcaac
cctttccaaacgggaggctccaaattgcagaattcccctatgcttggaaggaagcagcca
tgcgatgaccctgaaaaggtggaagttgaagagcctgcagtaaaggaaatggaaccagca
gccatgcttgaggtggttcattctgtcctagaagcacctgtccagacagaaattaaacct
attgcaccgaaggagacttccaagccagctgaagatgctgtggccatcacctctacagcc
gaggagactgctctgccgccaaaaggtacatatgaatttgattttgacaaccttgattca
gtcaaccctttccaaacgggaggctccaaattgcagaattcccctgtgcttggaaggaag
cgcccatgcgatgaccctcaaaaggtggaagttgaagagcctgcagtaaaggaaatggaa
ccagcagccatgcttgaggtggttcattctgtcctagaagcacctgtccagacagaaatt
aaacctattgcaccgaaggagacttccaagccagctgaagatgctgtggccatcacctct
acagccgaggagactgctctgccgccaaaaggtacatatgaatttgattttgacaacctt
gattcagtcaaccctttccaaacgggaggctccaaattgcagaattcccctgtgcttgga
aggaagcgcccatgcgatgaccctcaaaaggtggaagttgaagagcctgcagccatgctt
gaggtggttcagcctgtcctagaggcacctgtccagccagagattaaccctattgcacaa
ttgtcaactgctcctgaagagaccagcaagccagctgaagaatccatacctcagcccagt
gcagccccttccaaggatggtgcagtgaaacttgagttcaattttgatgacggcgtggtc
aaccctccccccaaaaagtttgacaaaaggcctgttttgaagccgacatggaaaaaggct
gtacctacagaaaaaaaagaacctgctcaatccaaggaatctccagtgaagcaattggtc
aatactgataatgaaattcctcttcccaagggcaagtacaactttgactttaataaattt
gacccaagtgtcaatccatttgggacaaatgtaaaaatgactgaatctacagtctgtaag
gtgaaatccagtccagatgccaaggcaccaacctcagtcagggtgactgtttaccctgac
aaagtggcagaacctgttcagcaagaaactgcaccatcactaattgtttctattgctgga
tatgaacctgatcgttctgccgtaaaaggaattgacaacattccacagaatctgacgctt
cagatggactcttctgaagttcaggatccttcctctggaaaagagcaggaacctccaaca
aaacctgaccaaccttcgctaagcactccagaacccttggaactctgccaatttgaacag
accccacagaatgacatgtcagaatttaatgaggactttgttcctggaaccacattcatg
gcgaatgactttgacaggcagatggactacctggagcagtttgggtccagcacttttaag
gagtcggcactgagaaaacaatcactgtacctcaaatttgacccactaatgcgggagagc
cccaataagtctggagtccgtgcaggactcaacaacctctcacgacctgctccctttgct
tcacgtgtggagacccagaagattggaactgatgaggtgaatggactgaaatctgtcaac
cctaaactgcttcatgacctaccacctgttcaagttgttggtcctcggactcttgtgaca
aattcccctgttcttgagaatctggtacctactttaccccaaccagccaaccctgatggt
aacatcatagaggtgctgaaatacagtcagcaagacatgaatgttgccattgccaagatc
cagatacaagcaaaggagaatgcggatgaatggaaatcgaagcatgacacgttatctcag
gataatcatgaaatggggaaaatcatgtcagcatttgaagccacaatcgctcagatattg
gctgataaacagagggagatggagaaggcccaggctgacatcactaaagtcctgcaggag
aaggaacagttatcagaggacctgaatgcaatggagcggtccttctcagatctcttcaag
agactagacaaatacaaagaggtcatcgagggttacataaagaatgaagagatgctgaag
aaatgtgctcaagattacctggctaggatcaaggaggaggagcagcgctaccagaccctg
aaagcccatgcagagcagaaaattagcctggcaaatggagagattgcggaggtgcgctcc
aaattaaagtctgaagtcgctgcacttcaggcccagctgcgcagggagcagctaaaggcc
cagtcactggagaagagccttgaccagaaagtaaaagagactgaagaactcaccaacctt
tgcgatgaactaatagctaaagtccagaagggctga
DBGET
integrated database retrieval system
