Oncorhynchus keta (chum salmon): 118368322
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Entry
118368322 CDS
T09424
Symbol
exd1
Name
(RefSeq) piRNA biogenesis protein EXD1
KO
K18740
exonuclease 3'-5' domain-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
oke03019
]
118368322 (exd1)
Messenger RNA biogenesis [BR:
oke03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Cargo complex
118368322 (exd1)
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
Motif
Other DBs
NCBI-GeneID:
118368322
NCBI-ProteinID:
XP_035608234
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Position
35:31033174..31040839
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AA seq
567 aa
AA seq
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MTMDDFQFMDSFKRKRIKLTLKTATFLGIVQRINANKTVILEDVVDVKNGRKFPGVKLFF
GHEILNVEFPNVTKSERDHTSDHRPEGHLTVAEFQPYRKGLILNDDDESHVNFVVIDEFH
EKFGPAMMHIRKQQVIGIGADGVGTFQHERLCWLQIATKNKVYLFDILLLGARAFKNGLS
MILENNHILKVTHDCRSLAGCLMAQFGVNLTNVFDTQVADILCFYTETGGFLPDRVSTLP
KVVSLHLKMSSSQLSSLNIKSLLTKEDKEVWYVRPCPLSLLKVMALSVIHLQPLRLVLLD
ALMADYTGLVDSYLSGSREEPVHMQNIGSSSVLELPRELRELEHTRQKRQKWAVDRYPVT
EQGLLERSNPRPLPPSQNGQGQDTATQRQPDPPVPAAVAPVVPEPGQGPAETPCPSNTLG
ASDLHAMTCALTQEAQQSYRKQPSGVVSPVAKSGAPGLLEIVMDTMAGRGRSLLKDPTPP
ILPVFPSLGRGLALPIPAAQVPKESPGALKTQAPVGRVEVPVPPGPRPSPVQPSENIPGA
GRGLIQKPQGLTSPLSLSFSSFRKSHL
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggacgactttcaattcatggatagcttcaagagaaagcgcatcaaattgacc
ctcaagactgcgactttccttggaattgttcaacggataaacgccaataaaactgtgatt
ttagaggacgttgtggatgtcaagaatggaaggaaattccctggagtgaaactattcttt
ggacatgaaattctcaatgtggaattcccaaatgtaacaaagtctgaacgagatcacacc
agtgaccacagacctgaaggtcacctgacagtggcagagttccagccttacaggaaaggt
ctcatactgaatgacgatgatgagagccatgtcaactttgtggtcattgatgagttccat
gagaagtttggtcctgctatgatgcacatccggaagcagcaggtgatcgggataggagct
gacggggtcgggacgttccagcacgagagactctgttggctgcagattgccactaagaac
aaggtgtacctctttgacatactgttgcttggagcccgggccttcaaaaacggcctgtcc
atgatcctagaaaataaccacatattaaaggtcactcatgactgccggagcctcgccgga
tgtttgatggctcagtttggagtaaatctcaccaacgtctttgacactcaggtggcagat
atcctgtgcttctacacagagactggtggcttcctgccagacagggtcagtaccctaccg
aaggtggtgagcctacatttgaagatgtcctcgtcacaactctcctctctcaacatcaag
tctctgctcaccaaggaggacaaagaggtgtggtacgtgcgtccctgccctttgtccctg
ctgaaggtcatggccctgtcggtgatccacctgcagcctctgagactggtgctgctggat
gccctcatggctgactacacaggcctggtggactcctacctcagcggcagccgagaggaa
cctgtccacatgcagaacatcggctcgagcagtgttctggagctgcccagggagctgcgg
gagttggagcacacgcgtcagaagcgccagaagtgggccgtcgaccgctaccctgtcact
gagcagggcctgctggagcgctccaaccccagacccctacccccatcacagaatgggcag
ggccaggacacagccacccaaagacaaccagaccctcctgtccccgcagcagtggcgcct
gtagtcccagaaccagggcagggcccagcagagacaccctgtcccagcaataccctgggg
gcctctgacctccatgctatgacctgtgccctgacacaagaggcccagcagagctacagg
aaacagccgtctggtgttgtcagcccagtggctaaatcaggagcaccaggactcttggag
atagtgatggacacaatggcaggcagagggaggtccctgttgaaagacccaacaccaccc
attctccctgtgttcccctccctgggaagaggcctggctctcccgataccagcagcccag
gtccccaaggagagccccggagccctgaagacccaggccccagtggggagggtggaggtg
cctgtccccccaggcccaagacccagcccagtacagccatctgaaaacattcctggtgca
gggagaggcctcattcagaaaccccaaggtctcacctctcctctcagtctctccttcagt
tcatttagaaagagccacctatga
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