Oncorhynchus keta (chum salmon): 118368406
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Entry
118368406 CDS
T09424
Name
(RefSeq) pre-mRNA-splicing factor syf2 isoform X1
KO
K12868
pre-mRNA-splicing factor SYF2
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
118368406
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
oke03041
]
118368406
Spliceosome [BR:
oke03041
]
Complex B
Other components
Prp19-related factors
118368406
Complex C
118368406
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SYF2
AAR2_1st
Motif
Other DBs
NCBI-GeneID:
118368406
NCBI-ProteinID:
XP_052352876
LinkDB
All DBs
Position
35:complement(33934506..33949001)
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AA seq
253 aa
AA seq
DB search
MASCAEGEDFLTASSTMASCAEGSASVSYEPTESTASQKREERLRKFRELHFKRNEARKL
NHKEVVEEDKRLKLPTNWEAKKARLEWELMTDEKKKECAAKGEDYDRVKLLEISAEDAER
WERKKKKKNPDPGFSGYAEAQLRQYQRLTKQIKPDMDGYERQREQCGEDFHPTSNSLIHG
THVPSKEGIDRMVEDVEKQIEKRAKYSRRRAYNDDADIDYINERNAKFNKKAERFYGKYT
AEIKQNLERGTAV
NT seq
762 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcctgcgctgagggcgaagacttcctgactgccagctcaacgatggcgtcctgc
gctgagggatctgcttcggtcagttatgagccgaccgaaagtactgcatctcagaagaga
gaggagagactccgaaaattccgggaactacatttcaaaaggaatgaagcacgcaagctc
aatcacaaggaggttgtggaggaggacaagagactgaagctgccaactaactgggaggct
aagaaagcccgtctggagtgggaactcatgaccgatgaaaagaaaaaggagtgtgcggcc
aaaggggaggactatgacagggtgaaactgctagagatcagtgctgaggatgctgagcgg
tgggagagaaagaagaagaagaagaaccctgacccaggattctcaggttacgcagaggcc
cagctgcgacagtaccagcgcctcaccaagcagatcaaaccagacatggacggctacgag
aggcagcgagagcagtgcggcgaggatttccaccccacatccaacagtctgatccatggg
acccacgtcccttccaaggagggcatcgaccgcatggtggaggatgtggagaaacagatc
gagaagcgggccaaatacagccggcgtagggcctacaacgatgacgcagacattgactac
atcaacgagaggaacgccaagttcaacaagaaggcagagcggttctatggcaaatacaca
gctgagatcaagcagaatctggagagaggcacagcagtctaa
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