Oncorhynchus keta (chum salmon): 118368440
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Entry
118368440 CDS
T09424
Name
(RefSeq) AT-rich interactive domain-containing protein 1B-like isoform X1
KO
K11653
AT-rich interactive domain-containing protein 1
Organism
oke
Oncorhynchus keta (chum salmon)
Pathway
oke03082
ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
118368440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
oke03000
]
118368440
03021 Transcription machinery [BR:
oke03021
]
118368440
03036 Chromosome and associated proteins [BR:
oke03036
]
118368440
Transcription factors [BR:
oke03000
]
Eukaryotic type
Helix-turn-helix
ARID
118368440
Transcription machinery [BR:
oke03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
118368440
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
118368440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BAF250_C
ARID
Motif
Other DBs
NCBI-GeneID:
118368440
NCBI-ProteinID:
XP_035608434
LinkDB
All DBs
Position
35:35648264..35884756
Genome browser
AA seq
2382 aa
AA seq
DB search
MAAQVASAPTTTNNKKNKLSGSLGQEIHSGKSGGGTISRSGAMLGAGDGTNTMNNVDHHH
QNELNMVNSTSPNNNSDTREKESGNNITSSNSTTSLEGMETGLIANHKQNNVSGDPPQHL
TPPQQQSQFNPFPQHQQRQIQSNNINNSQATMGESENQHHGGKRGVLASQTEQQMLSKGE
GDHTCKPGERMGARYEHANLGPTTDISSQPQSAGGNSAISEFNNYYGTSRVGACYDQHGG
QNTGMGMMHSSGPNNMDPLHNSHEGYHNSQYNHYPGYRQGYGGAGYGMMAPSRQGSNMLI
GPGSNTPASHVKAAMGAASSGSGGSVGGFQRFPGHTQHPSGATPTLNQLLTSPSPMMRGY
GSGYHQDYNSPSAQQQAAIGLGKDMTSQYGSTTHGWPGQQRNHPSMSPGNGGQGISRPQV
ASVDFMAMKRSHLYGMGNNPYSQQQQGGPYPSQPYGSPATHRYPMGMQGRGQAGMGGMQY
PQQQQVPPQYGQQGMGGYSQQQQGTPPGSYFSPPQQNPTAPTQPPYLPPRAPPQQEAPQE
SYRGSTRSQQHVPGNSGKANLEDMGLIPQDRPSSLPDLSGAIDDLPTGTDAGHSSAVSAT
GSTSSQGEQSNPSQSPFSPHASPHLSGRGSGPSPSPVGSPVGSNQSRSGSGPISPVSGPT
TAQGSQMAPQIPVNTSDVPHSPLTQSPMPQERGFMSNMQRNQCGSQFATPPPQSGPSMSP
HPSPGPGPGGQMYPGMGPRPYLQGGSSGPYGPQGSQANQYGPQGNYPRPPNYGGTPSANY
SGPGPGMTNSLGMNASSPMHGQGPGQPMPMGRSLGAGSRPYPNMAPSSPSMPQPAGPGMG
PPSLGNVNRKAQEAAASVMQAAVNSVQSSRPPYVRSPALHTSSGPSPLPPLPTTPTPPPL
QPPHPNYNTPHSQQHGQGSYPGPGINQIVPPINQSQGNNSGMGTPQGPPYNMPPSGPMGM
AGDGMVTPVGKQKMDGKEESMPTNEPPRPKDGYSGSQCVSQPTTPGAMPVPSPLSPSPAS
LSSYHGDDSDSISSPVWPKTPSSPKPNSSTMTNEQITRLYDMGGEPERRGWVDRYLSFME
ERGTPVPHLPAVGKKPLDLYRLYMVVKEIGGLAMVNKNKKWRELSTSLSVGTSSSSASSL
KKQYIQYLFAYECKVERGEDQPADSNTGTGGDNRKQAKLQPPSPANSGSLQGPQTPQSSS
SSSMAEMSGDLKPPTPASTPQGQVTPIPASRNSVVSVQDPFSEVSDPVFQKRNSLPPGGP
GGPYQQGVNMPPDVMMRMQYEKDPFAGMRKVAGGDSYMPGQMPSGGMQEMYGRPPSGMGQ
RSQYPYGPGYDRRPDHVIGMEGSMGTPGSQSNMGPSNSEGSIYSPNRYPSQLRHEGYGQQ
YPGMSYGMHPSGMYPQQQGYKRPMEGMYGPPGKRHEGEMYGPPGKRHEGEMYGPPGKRHE
GEMYGPPGKRHEGEMYGPPGKRHEGEMYTMQYGSQQPDMYNQYSTGYSGPERRPMQGQFP
YPSPYSRERMQASGQGQHPQQPMGPQMMAGGPPSNNGVEGPQGPNMWPSRTDMGYPYSNR
QGAPSQVPSYGPLGRGEDMEGRPIQDGQWLGHGGHRQSSYMSGGMTPMSSRQPPSAYQTS
PSMANHLPRAPSPGSFQRSMEARMSPNKAAYMGSMKMPCKLGMPMPGQGNGHPGQAPPNL
RRDLNYPLGSVEATMPLLKPRRKITSKDTGTPEAWRVMMSLKSGLLGESTWALDTVNILL
YDDSTVASFTLAQLPGFLELIVEYFRRCVMEIFGILEEYEIGTIGQKTLLGPEACNQGEE
LTSEPEMDCEASQPEPESEQEVERGEVEKGEVENGEDKPADITEKVELMSPPSTTVPAPE
GTKEESEAEVKVKKEEGEKEQEGEKGKEEGEKPTESKKVPAESKEDYPNQSEPRPQQASK
YDKFPIKILHKEDLIEDMTEQLAHVTEFTSGLLHWQVGGGDSTAHIQTHFEGRGEQPDRT
EGERDECAILNKEQETDSRTEEKGNRITATIDDILCARLEALSEGHPTHSAPTYPFRLHQ
GGGHKHITLLEDEPHCLNEAPLSAASPWQDSLAKRCLCVSNILRSLSFIPGNDSDMSRHP
GLVLILGRLLLLHHQHPERKRTSPSYQREEVQERGLACSKDEWWWDCLTVLREDTLVTLA
NISGQLDLSLYPETICLPILDGLLHWMVCPSAEAQDPFPSAAPHSPLTPQRLVLECLCKL
SIQDNNVDLLLATPPFSRQEKLYATLVRYVGQRKNQVYREMAVATLSNLAQGDSTSARAI
AVQKSSVGNLMGFLEDGVSMAQYQQNPHSLLHMAHHPPMEPPSVNMMCRAAKALLAMAKV
EENRPEFVLYEGRLLDISISSVLNPGVASIVCEVLFQFVKKL
NT seq
7149 nt
NT seq
+upstream
nt +downstream
nt
atggctgcgcaagtggcatcagcaccgacgacaactaacaataagaaaaataaattgtct
ggcagtttgggtcaagagatacattcggggaaatcgggaggaggaactatatcgagatct
ggagcaatgcttggagctggagatgggactaacacaatgaataatgtagaccatcaccac
caaaacgagctcaacatggtcaattcaacttctccgaataacaattctgacacacgggag
aaggagagtggaaataacataacatcgtcaaattcgacgacctctctggagggaatggag
acgggtttgatagcaaaccacaaacagaacaatgtgagtggagatccccctcagcacctc
acgccgccgcaacagcagtcacaatttaacccgtttcctcagcatcagcagcgccagata
caaagtaacaacatcaacaacagccaagcgacaatgggagagagtgagaatcagcaccac
ggagggaagagaggtgttttggctagccagacagagcagcagatgctgagtaaaggtgaa
ggggatcatacctgtaaaccaggggagcgaatgggtgccaggtatgaacatgccaacttg
ggaccaacgaccgatatcagcagccagccccagagcgcaggagggaacagcgctatttca
gagtttaataactactatggcacttccagagtaggggcctgctatgatcaacatggcgga
caaaacactggaatggggatgatgcactcctcgggacccaacaacatggacccattgcac
aactcccacgaaggataccacaacagccagtacaaccactaccctggctaccggcagggc
tacggtggagcgggctacggtatgatggccccgtccagacagggcagtaacatgctgatt
ggccctggcagcaacactccagctagccatgtcaaggctgctatgggagctgcttcctcc
ggttctggtggaagtgttgggggctttcagagattcccaggacatactcagcatccctcg
ggagccaccccaactctaaaccaactgctgacgtctccaagtccaatgatgcgaggttat
ggcagtggctatcatcaagactataacagtccctctgcacaacaacaagctgccatcggc
ttaggcaaagacatgacttctcagtatggctccacaacccatggctggccagggcaacag
agaaatcacccgtccatgagtcctggaaacggagggcaaggtatcagcagaccacaggtg
gcttccgtggacttcatggctatgaagcgctcccatctctacgggatgggcaacaacccc
tactctcagcagcagcagggcgggccctaccccagccaaccatatggatcgcccgctaca
cacagatacccaatgggaatgcaggggaggggccaggcgggcatgggcggcatgcagtac
cctcaacagcagcaggttccaccccagtacggccagcagggtatgggaggatacagccag
cagcagcagggaacacctccgggatcctacttcagccccccccagcagaaccccaccgcc
cccacacagcccccctacctgcctccccgcgccccaccccagcaggaggccccgcaggag
agctacagaggcagcaccaggagtcagcagcatgtcccagggaattctgggaaggccaac
cttgaggacatgggtctgatcccgcaggaccgcccctccagcctcccggacctgtctggt
gccatagacgacctccctacagggacagacgctggtcacagttcagccgtcagtgctaca
ggctccaccagtagccagggggagcagagtaacccgtcccagtcacccttctcaccccac
gcatcaccccacctgtctggccgaggcagcggcccatcgccctctcctgttggctccccc
gtgggctccaaccaatcacgctccggctctggcccaatctccccagttagcggcccaacc
acagcacaagggtcccagatggccccccagatccccgtcaacacgtcggatgtccctcac
tcccccttgacgcagtcccccatgcctcaggagaggggctttatgtccaacatgcagaga
aaccagtgtggctcccagtttgcaacaccaccacctcagtcggggccttccatgtcccct
cacccctctcctggtcctggtcctggaggacaaatgtacccagggatggggcccaggccc
tacctccagggtggctccagtggcccctacggaccccagggatcccaggcaaaccagtat
ggaccccaaggtaactacccacgtccacccaactacggtgggacccccagtgccaactac
agcggtcccggccctggcatgaccaacagcctgggtatgaatgccagcagccccatgcac
ggccagggtcccgggcagcccatgcccatgggccgcagtcttggcgcgggaagccgaccc
taccccaacatggcccccagctcccccagtatgccccagccggcaggcccagggatgggc
cctccttcactgggcaacgtcaaccgcaaggcccaggaggcagccgcttccgttatgcag
gccgcagtcaactctgtacagagcagtagacctccctatgtgaggtccccagccctccac
acctcttctggacccagtcccctgccccctctccccaccacacccacccctcctcctctc
cagcctccacaccccaactacaacacccctcattctcagcaacacggacagggcagctac
ccaggccctggcataaaccagattgtgccccccatcaaccagtcacagggcaacaactca
ggcatgggcacgccccagggtccaccctacaatatgccaccctcagggcccatggggatg
gctggggatgggatggtgactcctgttgggaagcagaaaatggatggcaaggaggagagc
atgcccaccaatgaacctcccagacccaaggatggctacagtggatcccagtgtgtctcc
cagcccaccacccctggggccatgcctgtcccctctcccctgtcccccagcccagccagc
ctgtcctcctaccatggggatgacagtgacagcatcagcagccccgtctggccaaagact
ccctccagccctaagcccaactcgtccaccatgactaacgagcaaatcacacgtctgtat
gatatgggtggggagccggagaggcgtggctgggtggaccgctacctgtcctttatggag
gagaggggtacacctgttccccacctccctgccgtgggcaagaagcccctggacctctac
agactgtacatggtggtcaaggagatagggggcctggccatggtgaacaagaacaagaag
tggcgagagctgtccactagtctgagtgttggtacctccagtagctccgccagctctctg
aagaagcagtacatccagtacctgtttgcctatgagtgtaaggtggagcggggagaggac
cagccggccgacagcaacactgggactgggggggacaacaggaagcaggccaagttgcag
ccgccctctcctgctaactcagggtccctgcagggcccccagaccccccagtcgtcaagc
agcagctccatggcagagatgtcaggtgacctgaaaccccccaccccagcctcaaccccc
cagggccaggtcacccccatcccagccagcaggaacagtgtggtcagtgtgcaggacccg
ttctctgaggtgagcgacccggtcttccagaagcgtaactccctccccccggggggccct
gggggaccgtaccagcagggggtcaacatgccccctgacgtgatgatgaggatgcagtac
gagaaggaccccttcgctggcatgaggaaggtggcaggaggggattcctacatgccaggc
cagatgcccagcggtggcatgcaggagatgtatggcaggcctccatcaggcatgggccag
cgttcccagtacccatacggaccaggctacgacaggagaccagaccatgtgatagggatg
gaggggagcatgggcacccccgggagccagagcaacatgggaccttccaacagcgagggc
agcatatactctcccaacagatacccctcccagcttagacatgagggttacgggcagcag
taccctggcatgtcatatggaatgcacccctcagggatgtaccctcaacaacagggttac
aagcgccccatggagggcatgtacggccccccaggcaagaggcacgagggggagatgtac
ggccccccaggcaagaggcacgagggggagatgtacggccccccaggcaagaggcacgag
ggggagatgtacggccccccaggcaagaggcacgagggggagatgtacggccccccaggc
aagaggcatgagggggagatgtataccatgcagtacggcagccagcagcctgacatgtac
aaccagtacagcactggttattctggtcctgagaggaggcccatgcagggccagttccct
tacccctccccctacagccgagagcgcatgcaggcctctggccaggggcagcacccccag
caacccatgggtccccagatgatggccggggggccaccctccaacaacggagtggaagga
ccccaggggcccaacatgtggccctccaggacagacatgggttatccctactctaacaga
cagggggcaccctcccaggtaccgtcatatggtcctttggggagaggagaggatatggag
ggccgacccatccaagatggtcagtggctcgggcatggaggccatcgccagtcctcctac
atgtcaggtggtatgacacctatgtcctctcgccagcccccctctgcctaccagacctcc
ccctccatggccaaccacctgccccgagcacccagccccggctccttccagcgctccatg
gaggcacggatgtcccccaacaaagctgcctatatgggctccatgaagatgccatgcaaa
ctgggcatgcccatgccagggcagggtaatgggcacccaggccaggccccacctaacctg
cggagagacctcaactaccctctaggatctgtagaggccaccatgccccttctcaagccc
cgccgcaaaattacctcaaaggacactggaaccccagaggcgtggcgagtgatgatgtct
ctgaagtcaggtctgctgggtgagagtacctgggccctggacaccgtcaacatcctgctg
tatgatgacagcactgtggcctccttcaccctcgcacagttgcctggcttcctggagctg
atagtggagtacttcagacgctgtgtgatggagatctttggcatcctggaggagtatgag
atagggaccatcggccagaagaccctcctggggccggaagcctgtaaccagggggaggag
ctgacctctgaacctgagatggactgtgaggccagccaaccagagcctgagtctgaacag
gaggtggagaggggggaggtagagaagggggaagtagaaaatggggaggacaaacctgct
gacatcacagagaaagtggaactgatgtcaccccccagtacaacggtaccagcccctgag
ggaacgaaggaggaatctgaagctgaagtgaaggtaaagaaggaagagggggagaaagaa
caggagggagagaaagggaaagaggaaggagaaaagcccacagagagtaagaaagtccca
gctgaaagtaaggaagactatcctaatcagtcagagccaaggccacaacaggccagcaag
tacgacaagtttcccattaagatcctgcacaaagaggacctgattgaagacatgacggag
cagctggctcacgtgacagagttcactagcggactgctccactggcaggtaggcgggggg
gattccacggcacacatccagacccactttgagggcaggggagagcagcctgacaggacg
gagggagagagagacgaatgtgctattctgaataaagaacaggagactgactcgaggaca
gaggagaaggggaatcgtatcaccgccaccatcgatgacatactgtgtgcccggctcgag
gctctgtcagagggccaccccacccactctgcccccacctacccattcaggctgcaccag
ggtgggggccacaagcacatcaccctgctggaggacgagccccactgtttgaacgaggct
cccctctcagcagcttctccttggcaggactccctggccaagcgctgcctctgtgtgtcc
aacatcctccgcagcctctccttcatccctgggaatgactcagacatgtcccgtcaccca
ggcctggtactgatcctgggcagactgctgctgctccaccaccagcacccagagaggaag
aggacgtcccctagctaccagagagaggaggtgcaggagcggggcctggcctgcagtaag
gatgagtggtggtgggactgtctcactgtactcagggaggacaccttggtcactctggct
aacatctctggccagctggacctttccctctacccagagaccatctgcctgcccatcctg
gatggcctactccactggatggtgtgtccctctgccgaggcccaggaccccttcccctcg
gccgccccccactcccccctaaccccccagagactggtgctggagtgcctgtgcaagctg
agcatccaggacaacaacgtggacctgctgctggccacgccaccgttcagccgccaggag
aagctgtatgccaccttggtgcgctacgtgggtcagcgtaagaaccaggtttaccgagag
atggctgtggccaccctctccaacctggcacagggggactccacgtcggcacgcgccatc
gcagtacagaagagcagcgtgggtaacctgatgggcttcctggaggatggggtgagcatg
gcccagtaccagcagaacccccacagcctgctgcacatggcccaccacccccccatggag
ccccccagtgttaacatgatgtgtcgggctgcaaaggctctgctggctatggccaaggta
gaggagaacaggccagagtttgtcttgtatgagggcagactcctggacatctccatctcc
tctgtgctcaacccgggggtagccagcattgtatgtgaagtactctttcagtttgttaaa
aaattatga
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integrated database retrieval system
