Oncorhynchus keta (chum salmon): 118368444
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Entry
118368444 CDS
T09424
Name
(RefSeq) rho guanine nucleotide exchange factor 10-like isoform X1
KO
K16727
Rho guanine nucleotide exchange factor 10
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118368444
03036 Chromosome and associated proteins [BR:
oke03036
]
118368444
Membrane trafficking [BR:
oke04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
118368444
Chromosome and associated proteins [BR:
oke03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
118368444
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_2
PH_19
RhoGEF
Beta-prop_LRRK2
ARM_At3g06530
Beta-prop_RSE1_2nd
DUF4294
Motif
Other DBs
NCBI-GeneID:
118368444
NCBI-ProteinID:
XP_035608443
LinkDB
All DBs
Position
35:complement(36017784..36105137)
Genome browser
AA seq
1455 aa
AA seq
DB search
MDIMEDFPLPPPEMLVDDVPYADEEEGEQFEFDDSGDEVPEADRLPPAPLAPDYGAQANG
VAPHPEPEGADPEHHLEGQPSNPDPPAATATVDTTTATVAASLPVPATMATTDTAVVAAA
EGEKASAVPADTDSDLPPPPPSEDSSPVGTDSVDKEVSSDDPPPANPRTISQKKVNPYSV
IDITPVQPQQLEQQHGLAPPSPVERVGGEEGEGQDVSPTSPPCVPPGYSVPVPCGYATPS
GVPLITPAYTTPIIIRHFSLDEDVTVVATCNTSVDSVFSEEYPAIREEDALSKWVSDPAN
TAWMENPDEVIYDDVPRENSDSTTEPDEMIYDDVEFGEEGCGSSLDTGWSSSEFESYDEQ
SDGEGQGENGLPDAFMRGKTPQKKTTHLSQDLTRLKEHYEKKMKDLMANTVGAVVLQQIK
QEHEQKMQKLVKAARDGTKDGLEKTKAVVKRGQSFIKTKTHCHERKSTCFEGEESELFIE
VECFNMEPVLSPVPEGLSQQQVVRRCILGSILESEKTYLDALKRILEQYEKPLSEIEPRL
LSDRKLKMTFYRIREILQCHALFQIALACRVAEWDSLEMIGDVFVASFSKSMVLDAYCEF
VNNFSTAMAVVRKTCASKPSFLDFLKHRQDTSSDRVTLYGLMMKPIQRFPQFILLLQDML
RNTPVGHSDRLHLQMALTELETLAEKLNEKKRDADQRCEIRHIAKAMNERYLNKLLSNDS
RYLIRSDDMVETVYNDRGEVIKTKERRLFLLNDVLMCATPNVRCSVDGSGNVPPGQKFLL
KWSVPLSFVDVVEFGSSEDIGDNSRFTPQPHSGEKVVVNAKPNKLYMGPGQLYQDLQNLI
HDLSLVNQISSMIGSLKGNYQNVNPTVAHDWVSGLQRLILKKEEEIRAADRCRIQLQLPG
KQDNRSGRATYFSVVFNSFSPAIKQSWISNLQMAKLALEEDNLQGWFFAEDDGNQIKKQK
HPLLLRQMPVVMSKLQDFKVECAVHNPEPHINIGSTADTPALGHGCVWVASCTNQMGQIA
IVAMQNSSPKVTECFNVESRILCMAYVPMEQSTQENRMGNPENNLSLVGKASDNPTVCLG
MEEGSIIVYKSSQQSKKVRLQHFFILDKSTVTSLVHKKQCLYAGLVSGSVAIYSRAEDGL
WNPDSPKVLKLGVLPVKAMLAVEGHVWASSGGQVFIISTNTHTVERQLEAHQEEGMVVSH
MVVAGVGIWIAFSSGSTLRLFHTETLEPLQDINVATPVHNILAGNQRVSVSSLLVCHGLL
LVGTNLGVTVALSVPRLQGIPKVTGRGMVSFHAHHGPVKFLTMAAAVCNRPSGNSDSPGS
SPPSQPGDTQDGEASPPPPQGSTPSPAATQGRGVWLGEAGCSSMALHDSLSSSCGSLALS
QGSLEHGPEDGAIYDLVNDPANHQRGRRVKKVDVSSLLVVSGGLGHRRVNRKSKQSRQEE
TVSTIMVWQIPLLNM
NT seq
4368 nt
NT seq
+upstream
nt +downstream
nt
atggacatcatggaagacttccctctcccacctcctgaaatgttggtggacgatgtgccc
tatgcggatgaagaagagggggagcagtttgaatttgatgacagtggggatgaggtccct
gaggcagaccggctgccccccgcccctctggcccctgactacggggcccaggccaatggt
gtggccccccacccagagccagaaggagcagaccccgaacaccacctagaggggcagccc
tcaaacccagaccccccagcagcgacagcgactgtggacacaactactgctacagttgcc
gcatcacttccagttccagctactatggccacaacagacacagcagttgtggctgcagca
gaaggggaaaaagcttcagcagtcccagctgacacagacagtgacctaccccctcctcca
ccttcagaggactcctctcctgtaggaacagactctgttgataaggaagtgtccagcgat
gaccctcccccagccaaccctaggaccatctcccagaagaaagtcaacccctactctgtg
attgacatcacccctgtccaaccacagcagctggagcagcagcatgggcttgcccctccc
tcaccggttgagagggtgggaggagaggagggggagggacaggatgtttcacccaccagc
cccccctgtgtccccccgggttactctgtgcctgtgccctgtggatacgccaccccctct
ggcgtgccccttatcacgccagcctacaccacgcccatcatcatccgacacttctcactg
gacgaggatgttactgtggtggcgacatgcaacacttccgtagacagtgtctttagtgaa
gagtatcctgccatcagggaggaggatgctttgtccaaatgggtgtcggaccctgcaaac
acagcctggatggaaaatccagatgaagtaatttatgatgacgtgcccagagagaactct
gattcaactacagagccagatgagatgatctatgacgatgtggagtttggggaggagggc
tgtggcagctccctagacactggttggagctccagcgagtttgagagctacgacgagcag
agtgacggggagggccagggggagaacggtctgcctgatgccttcatgagagggaagacg
ccgcagaagaagaccacccatctttctcaagatctgacacgcttgaaagaacactatgag
aaaaagatgaaagatcttatggcaaatacagtgggagcggtagtgctgcagcagattaaa
caggaacacgagcagaagatgcagaagctggtgaaggcagctagagatgggaccaaagac
ggcctggagaagaccaaagcagtggtgaaaaggggacagtcgttcatcaagaccaaaacc
cactgtcatgagaggaagtcgacctgttttgagggtgaggagtcagagctcttcatcgag
gtggaatgcttcaacatggagccagtgctcagtcccgtccctgaggggctgtcacaacaa
caggtggtgaggaggtgtatactgggctccatattagagagtgaaaagacctatctggat
gcactgaagcggattttagagcaatatgaaaagccactttcagagattgagcccaggttg
ctaagcgacaggaagctcaagatgacgttctatcgtattcgggagattctccagtgccac
gccctgttccagatcgccctggcatgccgcgtggccgagtgggacagtctggaaatgatt
ggggacgtctttgttgcctcgttctccaagtccatggtgctggacgcctactgtgagttt
gtgaacaacttcagcacggccatggcggtggtcaggaagacgtgtgcctccaaacccagc
ttcctggacttcctcaagcatcgtcaggataccagcagtgaccgggtcactctctatgga
ctcatgatgaagcccatccagagattccctcagttcattctgctgctgcaggacatgctg
agaaacaccccagtaggccacagtgacaggctacacctacagatggccctgacagagctg
gaaaccctggctgagaagctcaacgagaagaagcgggacgctgaccagcgctgcgagatc
agacacatagccaaggccatgaacgaacgctacctcaacaagctcctgagcaacgacagc
cgttacctgattcgctcagacgacatggtggagacagtctacaacgaccgcggtgaggtc
atcaagaccaaggagcgacgcctttttcttctcaacgacgtgctcatgtgtgccacgccc
aacgtccggtgcagtgtggatggtagtggcaacgtccccccgggccagaagttcctgctg
aagtggagtgtccctctgagctttgtggatgtggtagagtttggttccagtgaggacatt
ggcgacaacagccgcttcaccccccaaccccactctggagagaaggtggtcgtcaacgcc
aagccaaataagctgtacatgggtccaggccagctgtaccaggacctgcagaacctcatt
cacgacctcagcctggtcaaccagatctccagcatgatcggtagcctcaagggaaactac
cagaacgttaaccctacggtggcccatgactgggtgtcgggtctgcagcgtctcattctg
aagaaggaggaggagatccgggctgcagatcgctgtaggatccagctgcagctgcctggc
aaacaggacaacaggtctggcagggccacatacttttctgttgtgttcaatagcttctct
ccagccatcaaacagtcctggatcagtaacctgcagatggccaagctggctctggaggag
gacaatctgcagggctggttctttgcggaggatgatggtaaccagatcaagaagcagaaa
catcctctcctgctcaggcagatgcctgtggtcatgtccaaactacaggatttcaaggtg
gagtgtgcggtccataaccccgagccccacatcaacatagggagcacagcagacacacct
gcactcggacacggctgtgtgtgggtggcgagctgcaccaaccagatgggtcagatagcc
atcgtggccatgcagaactccagccccaaggtgacagagtgtttcaatgtggagtctcgg
atcctgtgcatggcttatgtacccatggagcagagtacccaggagaataggatggggaac
cccgaaaataacctctccttagtggggaaggccagtgacaaccctactgtctgcctgggc
atggaggagggcagtatcatagtctataagagcagccagcagtccaagaaggtgcgtctc
caacacttcttcatcctcgacaagtccaccgtgaccagcctggtgcacaagaagcagtgt
ttatacgctggccttgtgagtggctcagttgccatctactccagagcagaagatggcttg
tggaatccagactctcctaaggtgctgaagcttggggttctgccagtgaaggccatgcta
gctgtggagggccacgtctgggcttcctctggaggacaagtcttcatcattagcactaac
acgcacactgtggagaggcagttggaggcccaccaggaggaaggcatggttgtatcccac
atggtggtggctggggtgggtatctggatagccttcagctctgggtccaccctcagactg
ttccacacggagaccctggagcctctacaggacatcaacgtcgctacgcctgtacacaac
atcctggctggaaaccagagggtctctgtgagcagtctgctggtatgtcatggtctgctg
ctggtggggaccaacctgggggtgacagtggccctctctgtccctagactacagggcatc
cctaaggtcacaggacggggcatggtatctttccatgcccaccacggcccagtgaagttc
ctcaccatggcagccgccgtgtgcaaccggccctcaggcaactcagacagcccaggcagc
agcccacccagccagccaggggacacccaggacggggaggcctccccacctccaccccaa
ggctccacacccagtcctgctgctactcagggccggggagtgtggctgggggaggcaggc
tgctcctccatggccctccatgactccctgtcctcctcctgtggctccctggctctgtca
cagggctctctggagcacgggcctgaggacggggccatctatgacctggtcaatgaccca
gccaatcaccagaggggcaggagggtcaagaaggtggacgtcagctctctgcttgtggtg
tcgggggggctgggtcaccgcagggtcaacaggaagagcaaacagtcccgccaggaggag
actgtgtccaccattatggtgtggcagatcccacttctcaacatgtag
DBGET
integrated database retrieval system
