Oncorhynchus keta (chum salmon): 118368710
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Entry
118368710 CDS
T09424
Name
(RefSeq) DENN domain-containing protein 4C-like isoform X1
KO
K20163
DENN domain-containing protein 4
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118368710
Membrane trafficking [BR:
oke04131
]
Protein recycling
Rab GTPases and associated proteins
Other Rab GTPase associated proteins
118368710
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DENN
uDENN
dDENN
PPR_2
DUF2464
PPR_3
PPR_long
PPR
CA109-like
Motif
Other DBs
NCBI-GeneID:
118368710
NCBI-ProteinID:
XP_035608920
EnsemblRapid:
ENSOKEG00005030959
LinkDB
All DBs
Position
35:58363352..58444375
Genome browser
AA seq
1972 aa
AA seq
DB search
MIEDKGHRVTDYFVVAGLTDKSTPLEQDLSETKSSGPKAPITDLAVINKSAGETVPEGFT
CMESTYSGQQANLNHGSLKSHELFLCYKRDRDKPPLIDIGVLYEGKERLIQGCEVIQATP
YGRCANVNNSSATSQRIFITFRRAPPVQPQNSLAVTDICVIVTSKGETPPHTFCKVDKNL
NCGMWGSSVFLCYKKSVSASNSINYKAGLIFRYPEDDYESFPLSESVPLFCLPMGAKIEC
WAPNTRYPLPVFSTFVLTNSSGEKMYGAAIQFYEVYPIDLLSEKQKVQLGLLTTVEKKVI
PNRTVNTNKCICLLSRWPFFESFRKFLMFLYKLSVSGPHPLPIEKHISHFMHNVSFPSPQ
RPRILVQLSAHDTLMLAQPVCTPLPLSGADYSTLLMNLGSENCATLLHFVLLESKILLHS
LRPAVLTGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLNAPFPFIVGVDSRYFDLYDPPP
DVVCVDLDTNTIYLSDEKRHSNWKNLPKKPCKSLFNSLANLHHQLGIVRRTAQEGLAVEM
TPIEADFTWHKKMTSLEMEIQEALLRFMANILKGYRSYLKPITQAPSEKATSADSLYDLQ
GFLRSRERTHQKFYSQLTKTQIFIRFIEECTFVSDKDTGLAFFDDCIEKLFPSDKGNDKG
TKVEGESSEDTKLMELDESQKSEHTVFVMPPEPPATEEGSDPPAHYSYKSFPRLCMDLFD
RPREVIPALRSSTPGASLSSSPALLAKRTKQEIKLAYKMAKRFYSNPPLWAKCLFSHCYS
LWFICLPVGVRLAQSKSWAMQQAYNVLLKMRTSEVEVLDEVCYRVVMQLCGVYGQPVMAV
RVLVEMKKAGVHPNAITYGYYNKAVLEGPWPSRNRSGLFMWAKVRNVARALSQFKQAVHR
MPSMEGPTVITTGSDLGPSAGGLASSDGDRLSHGSADSSSEANGEDHTLFARSLIIADTA
DNHCSGGVQSDQGYGSKDELHQDLVDLAQSAALVIAVDQCSKSAAQHNGGDIAGSVDSAV
AVAEPPSPVKALPHVPSIVKLSTGASFDTAMKRGDAAPGKLFSLRSQSEDISLPVEGRSA
APGGSGVAGPAVQVQRQKAFSERSCSFSAESRAGMLMEKHGVDHIVSRMGADARILAAAL
SGGGTTPPPSKPLPSAAKALFKDLELESEEGRGPTLGKLSEEEGPVTDPTPLEEGLGKEE
KRMKGDRKEAGVEDEMGLKLEEEDEERDSGGRGSISLPTLEIKEVQVGADPLSLLVSEHE
ELASVTSQELPQSLPAMVSRNLADEIEMYMSLRSPLGPKSCSMELHQEGQGGDPSPDAAP
VKQPQERRSSLPVPPVKHPGGSSGDTTPKRSPAAVTRSKTFAVKASRSPASSRGVVASPR
SSPLTALVRSSQSGSLGSVINSISGMKMDTLLSGPKIDVLKSGMKQAGNLASKVWGAVAS
AYSYSDDEDELGPGYRERDSFPAGLDESMLLGGGGSDSPTHRGPTQGLVSNGLTQSSTSL
GSSSESSDTGRGPHSTHVTPGRPGRGPDSERSDQGSHHTSSSSIYQNCALEVLMSSCSQC
RSCECLVYDEEIMAGWTADDSNLNTTCPFCRTAFLPLLHVEFHDLRTTTAFYLNPSASGD
SIHSTSQQATATGSTENKVGAAMDTPTPGLISFPESEDPGEALARQTATHKSLIPEPAQS
DPLGLLEHQAGKRGTSLTRSNSVGGPLQSLVAQREPGHSVSTTSLPCSLTEMDGLGQKRP
NPMPVSVPYLSPLVLRKELETLLENEGDQVIYTHKFLSQHPIIFWNLVFYFQRLDLPSYL
PGLILTSEHCNNGVQLHQTSLSQDSKQVYVQLLWDNINLHQEPGEPLYQSWRTLMEKKGT
LAPTDYQETRTLLNSIVRSIQTNDVYGPINLLLREVKRNPEVKRQRGIYREILFLALVAL
GRENIDVEAFDREYRLAFDELSPEQIKALHKIDRPPNTNVQWCLKCFGAPVI
NT seq
5919 nt
NT seq
+upstream
nt +downstream
nt
atgattgaggacaagggccaccgtgtgaccgactactttgtggtggccgggctgacggac
aagtccacgcccctggagcaggacctgtcggagaccaagtccagcgggcctaaggcgccc
attactgacctggctgtcatcaacaagtcggcgggagagactgttcccgagggcttcacc
tgcatggagagcacctacagtgggcagcaggccaacctcaaccacggcagccttaagagc
cacgagctgttcctctgctacaagagggaccgcgacaagcccccactcatcgacattggt
gtgttatacgaagggaaggagcgtctcatccagggttgtgaggtcattcaggccacgccg
tacggccggtgtgccaacgtcaacaacagctctgccacctcgcagcgcatcttcatcacc
ttccgccgcgcgccgcccgttcagccccagaactcactggccgtcaccgacatctgcgtc
atcgtcactagcaagggcgagacgccgccgcacaccttctgcaaggtggacaagaacctc
aactgtggcatgtggggctccagtgttttcctgtgctacaagaaatcagtgtccgcatcc
aactccatcaattacaaagccggcctcatcttccgctacccagaggatgactatgagtcc
ttccccctgtcggagtctgtgcccctgttctgcctccccatgggggctaagatcgagtgc
tgggcccccaacacacgctaccctctgcccgtcttctccacctttgtgttaaccaactcc
tctggggaaaagatgtacggcgcagccatccagttctacgaggtctaccccatagatctc
ctcagtgagaagcagaaggtgcagctgggcctgctcaccaccgtggagaagaaggtgatc
cccaaccggacggtcaacaccaacaagtgcatctgcctgctctcccgctggcccttcttc
gagtctttccgcaagttcctcatgttcctctacaagctgtccgtctcgggtccccacccg
ctgcccatcgaaaagcacatctcgcactttatgcacaacgtgtccttcccttcacctcag
aggcccagaatcttggtccaactctctgcacacgacaccttgatgctcgcacaacctgtg
tgtactcctctccctctcagtggggcagactacagtacgttgctgatgaacctgggctct
gagaactgtgccacgctgctgcactttgtcctgctggagagtaagatcctgcttcactcc
ctgagacccgctgtactcaccggggtagcagaggccgtagtggcgatgatcttcccgttc
cagtggcagtgcccgtacatccccctctgcccgctctccctggcgggggtcctcaatgcc
ccctttcccttcatcgtgggcgtggactcccgctactttgacctttatgaccccccgccg
gacgtggtctgtgtggacctggacaccaacactatttacctgtctgatgaaaagagacac
agtaactggaaaaacctcccaaagaaaccctgcaagagcctgtttaactccctggccaac
ctgcaccaccagctgggcatcgtgcgtcggacagcccaggagggcttggcggtggagatg
acccccatcgaggcggacttcacctggcacaagaagatgacctccctggagatggagatc
caagaggccctgctgcgcttcatggccaacatcctgaagggctaccgctcttacctcaaa
cccatcacccaggccccctccgagaaggccacctccgcagactcactatacgacctacag
gggtttctgagaagcagggagcgcacccaccagaagttctactcccagctgaccaagact
cagatcttcatccgcttcattgaggagtgcacgttcgtcagcgacaaggatacgggcctg
gccttcttcgacgactgcattgagaagctatttccctccgataaaggcaacgacaaaggc
actaaggtggagggtgagtcctcagaggacaccaagcttatggaactagacgaatcacag
aagagcgagcacactgtcttcgtcatgcccccagaaccccccgccaccgaggaagggtcc
gacccccctgcccactacagttataagagttttccacggttgtgtatggacctgtttgac
cgccccagggaggtgataccagcgctgaggagtagtacacctggggccagcctgtccagc
agccctgcactactggccaagaggaccaagcaggagatcaagctggcctacaagatggcc
aagcgcttctactccaaccctccgctgtgggccaagtgtctgttcagccactgctacagc
ctgtggttcatctgcctgcccgtgggggtgaggctggctcagtccaagagctgggccatg
caacaggcctacaacgtcctgctcaagatgaggacatctgaggtggaggtgctggatgag
gtgtgttaccgtgtagtgatgcagctgtgtggcgtgtacggtcagcctgtcatggccgtc
cgtgtcctggtggagatgaagaaggcaggggtgcaccctaacgctatcacctacggatac
tacaacaaggctgttctggaaggcccctggcccagtcggaaccgcagtgggctcttcatg
tgggccaaggtgcgcaacgtggcgcgtgctctctctcaattcaaacaggcagtccaccgg
atgccctccatggaaggacccaccgtcatcacgacaggaagtgatttaggcccgtcagcg
ggcggcttggcgagcagcgacggcgaccggctgagccacggaagtgcagacagctccagc
gaggcaaacggagaggatcacaccctgttcgcacgcagcctcatcatagcagacaccgca
gacaaccactgcagcggaggagttcagtctgatcaaggctacggctctaaagatgagttg
caccaggacctagtggatttggctcaatcagcagcccttgtaatcgctgtggatcagtgc
agcaagtccgcagcacagcacaacggtggggacatagctggttcggtggacagtgcagtg
gctgtagcagagccccccagccctgtgaaagcactcccacatgtccctagcatcgtcaaa
ctgtccacaggggcgagttttgataccgccatgaagagaggagacgctgcccctgggaag
ctgttctctctgcgcagccagagcgaggacatctccctgccggttgagggtaggtctgca
gctccgggtggctccggggtggcggggcctgcggtccaggtccagcgccagaaggccttc
tcggagcgcagctgcagcttcagtgccgagagccgtgccggcatgctgatggagaaacat
ggtgtggaccacatcgtcagccgcatgggcgccgatgcacggatcttggccgcggctctc
tctgggggcggcaccacccccccaccttcaaagccacttcccagtgcggccaaagccctc
tttaaggacctggagttggagtctgaggaggggcggggtccgacgctggggaaactatca
gaggaggaggggccagtaacggacccaaccccactggaggaggggttagggaaagaggag
aagaggatgaaaggtgaccggaaggaggcaggagtggaggatgagatgggtctaaagttg
gaggaggaagatgaggaaagagattcaggggggaggggctctatttctctgccaaccttg
gagattaaggaggtgcaggtaggggcagaccccctctccctccttgtctcggagcacgag
gagttagcctccgtaaccagtcaggagctgccgcaatccctgcccgccatggtgtcccga
aacctggcagacgagattgagatgtacatgagcctccggagcccgcttggccccaaatcc
tgtagcatggagctccaccaggagggccagggaggggacccttccccagatgctgcccca
gtgaagcaacctcaagaacggaggtccagcctccccgtgccccctgtcaaacacccaggg
gggtcaagcggggacacgacgcctaaacgcagccccgcagcagtcacgcgctccaagacc
ttcgccgtgaaggcctccagaagccctgcatcttccaggggtgttgtggccagcccaagg
tcatcgccgctgactgcgctggtgaggtcgtcgcagagtggttcgctggggtctgtcatc
aactccatctcgggcatgaagatggacaccctgctctcgggtcccaagatagacgtgttg
aaatcaggcatgaagcaggcagggaacctggccagcaaggtgtggggcgctgtggcctca
gcctactcttactctgacgacgaggatgaactgggccccggctatagggaaagggacagt
ttccctgccgggctggatgagtccatgctgttggggggtggaggaagtgacagtcccacc
cacagagggcccacccaaggcctggtgtccaacggcctgacccagagcagcaccagcctg
ggcagcagcagtgagagcagtgacacagggagaggaccccactccacacacgtgactcca
ggaaggccaggcagaggtccagactctgagaggtcagaccaaggctcccaccacaccagc
tcctctagtatctaccagaactgtgcccttgaggtgctgatgtccagctgctcccagtgt
cgatcctgtgagtgtctggtatacgacgaggagatcatggcgggctggacggcagacgat
tccaacctcaacaccacctgtcccttctgccgcaccgccttcctgcccctgctccacgtc
gagttccacgatctgcgcaccaccacagcgttctacctgaaccccagcgcatcaggagac
agtatccacagcaccagccagcaggccacagctacaggctccaccgagaacaaggtaggg
gctgcaatggacaccccgacccctggcctcatcagcttcccagaatctgaggacccagga
gaggccctggccaggcagactgctacgcacaagagtttgataccggagccggctcaatcg
gatcccctgggcctgctggagcaccaggcagggaaaagggggacgtctctgacacgcagc
aacagtgtgggcgggcctctacagagcctggttgcccagagagaaccaggacacagcgtg
tccaccaccagcctgccctgcagcctgacagagatggatggcctgggacagaaacggccc
aacccaatgcccgtgtctgtgccctacctcagccccctggtcctccgcaaagaactagag
accctactggagaatgagggagaccaagtcatctacactcacaaattcctgagccagcac
cccatcatattctggaacctggtgttttatttccaacgcctggacctgcccagctatctg
cctggcctcatcctcacctcggaacactgtaacaatggagtacagctccaccagacatcc
ctgtctcaagacagtaaacaggtgtatgttcagctgctgtgggacaacatcaatttgcac
caggaacctggggaacccctctaccagagctggaggaccctgatggagaagaagggaacc
ctggcccccactgactaccaggagacacggaccctcctcaacagcatcgtccgcagcatc
cagaccaacgacgtctatggccccatcaacctgcttctccgggaggtcaagaggaaccca
gaggtcaaacgccaaaggggtatctatcgagagatcctcttcctggcgctggtggcattg
ggacgggagaacattgacgtcgaggcttttgaccgtgaataccgcctggcctttgatgag
ctgagcccagagcagatcaaggccctgcataagatcgaccggccacccaacaccaacgtc
cagtggtgcctcaagtgcttcggtgctccagtcatctga
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