Oncorhynchus keta (chum salmon): 118368869
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Entry
118368869 CDS
T09424
Name
(RefSeq) low-density lipoprotein receptor-related protein 10-like
KO
K20050
low-density lipoprotein receptor-related protein 3/10/12
Organism
oke
Oncorhynchus keta (chum salmon)
Brite
KEGG Orthology (KO) [BR:
oke00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
oke04131
]
118368869
Membrane trafficking [BR:
oke04131
]
Endocytosis
Clathrin-mediated endocytosis
Low-density lipoprotein receptor (LDLR) family proteins
118368869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldl_recept_a
CUB
Phage-tail_3
Motif
Other DBs
NCBI-GeneID:
118368869
NCBI-ProteinID:
XP_035609211
LinkDB
All DBs
Position
35:complement(66226824..66235386)
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AA seq
753 aa
AA seq
DB search
MTASFNLCVLNVLFVTAYSSLELASSTAHCGQSPQVLEAPRGEIRSSVHHSWSYRPRPFN
CSWIIKAHVGEPVILSFSQFSTRCKKEWVSVTSSTGKPITFCGSDLPKPMELMGGNITVT
HHFLPHLFPVSAFCLGYIRDSGECPVVDFECLGGRCLPLSWRCNGQTECLGEGMGLGTDE
QECDGEIEIQDPEHDKVVVTTTTPESYIEREREGETGREKSGGRDWETAPVEVEKEEKEV
EEDGDYTKVKEPDNPMEDYWEFLPRQLPSPQPHRAHPSPGVTQAPIEWPCGGLLQTFYGT
FAPPSIKGPPLFCVWTLDPQDSRPLKLDLQLLELGPGDTVTITNRQQGTGELIKTITSES
SYKAIQVESRTGLLSLTYHTLPGSEGLGFNATYRVGGYCPPWEGKCGGAAGGCYTQEQKC
DGRWDCPETGHDEAGCRGCPRDQFACGGVGQRAVLAGHNFIGRPVCFPAKERCNYQLYCA
DGSDEKDCTICQPGTFHCDSNRCVFESWSCDGQVDCKDGTDEMNCTMTLPRKVITAATVG
SLVCGLLLVIAMGCTCKLYSLRTREYSMFAPISRQEAELIQQQAPPSYGQLIAQGIIPPV
EDFPTENPNESSSLSLRGFLQLLRQDTSNSPRRRRRPRFIRRAVRRMRRWGLIPRSASRP
SQPSSSAPQLTDAPSTGVDPSQSTPATTSLAVEAVNLPLPQKLGLLPQTVQYQPPPPPHF
LPPPTLLPPPIVSTPATPQSPPVAVPPPPAAPP
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgactgcctctttcaacctttgtgtcctcaacgttttgtttgtaactgcctacagcagc
ctggagctggcctccagtactgctcattgtggacaatctccccaagtcctggaagctccg
aggggagagatcagaagctccgtccaccacagctggtcctaccgcccacggccgttcaac
tgtagttggattatcaaggcacacgtaggagagcccgttatcctcagtttctcccagttt
tctacacgctgtaagaaggaatgggtctcggtgacatcatcaactggcaagcccattacc
ttttgtggttccgacctgccaaagcccatggagttgatgggggggaacattacagtgacg
caccacttcctgccacacttattccccgtctctgcgttctgcctgggctacatcagagac
tctggtgaatgtccggtggtggactttgagtgtttgggcgggcgctgcctgcccctgtcc
tggcgctgtaacggccagacagagtgtctgggtgaagggatggggctgggaacagatgag
caggaatgtgacggagagatcgagatccaggatcctgagcacgacaaagtagtggtaacc
accaccacaccagagtcctacatagagagagagagggagggggagacaggaagagagaag
agcggggggagggattgggaaacggcaccggttgaggtggagaaagaggagaaggaagta
gaggaggatggggactacaccaaggtaaaggagccagataatcctatggaggactactgg
gagttcctgcctcgtcaactccccagcccccagcctcacagagcccaccccagtcccggt
gtgacccaggcccccatcgagtggccatgtggcggcctcctccaaaccttctatgggacg
ttcgcccctccttccatcaagggcccccctctgttctgtgtgtggaccctggacccccag
gactccaggcctctgaagctggacctgcagctgctggaattggggcctggagacacggtc
actatcaccaacagacagcagggcactggggaactcatcaaaactatcaccagcgagtcc
agctacaaggccatccaggttgagtcccggactggccttctctccctgacctatcacacg
cttcccggctcggaggggctgggcttcaacgccacctaccgtgtcgggggctactgcccc
ccctgggagggtaaatgtgggggtgccgcagggggctgctacacccaggaacagaagtgt
gacgggcgctgggactgtcctgagactgggcatgatgaggcgggatgcagggggtgtccc
agggaccagtttgcttgcggaggggtggggcagcgggcggtgctggcgggtcataacttc
atcgggcgtccggtgtgcttccctgccaaggagaggtgtaactaccagctgtactgtgct
gacgggagcgacgaaaaagactgtaccatatgtcaacctgggaccttccactgcgacagc
aataggtgtgtgtttgagagctggagttgtgacggccaggtggactgtaaggacgggaca
gacgagatgaactgcaccatgaccctgcctcgaaaggtcatcaccgcggcaaccgtgggc
agcctggtctgtgggctgctgctggtcatcgctatgggctgcacctgcaagctctactca
ctgcggacccgagaatacagtatgtttgccccaatcagccgccaggaggcggagctaatc
cagcagcaggcccctccctcctatggtcaattgatcgcccagggcatcatccctccagtg
gaggacttccccacggagaaccccaatgagtcttcctctctttctctgagaggttttctc
cagcttctcagacaggatacttctaactctccacgacgccgacgccgtccccgattcatc
cgccgggctgtccgtcgcatgcggagatggggcctaatccccagatccgcctccaggccc
tcccagccatccagctctgccccccagctgacagatgccccctctactggtgtggatccc
agtcaatcaactcccgccaccacctcattggctgtggaagccgtcaatctgccattgcca
cagaaactaggcttgctcccacagacagtgcagtaccagccaccaccacccccccacttc
cttcctccacccactctactccctccacccattgtctctactccagctaccccccagagc
cctccagtggctgtccccccacccccagcagcccctccctag
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